Strain identifier
BacDive ID: 134101
Type strain: 
Species: Acetanaerobacterium elongatum
Strain Designation: Z7
NCBI tax ID(s): 258515 (species)
version 5
General
@ref: 31285
BacDive-ID: 134101
keywords: motile, gram-positive, anaerobe, Bacteria, 16S sequence, genome sequence, rod-shaped
description: Acetanaerobacterium elongatum Z7 is an anaerobe, gram-positive, motile bacterium that was isolated from wastewater.
doi: 10.13145/bacdive134101.20201210.5
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/firmicutes
- domain: Bacteria
- phylum: Firmicutes
- class: Clostridia
- order: Eubacteriales
- family: Oscillospiraceae
- genus: Acetanaerobacterium
- species: Acetanaerobacterium elongatum
- full scientific name: Acetanaerobacterium elongatum Chen and Dong 2004
@ref: 31285
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Eubacteriales
family: Ruminococcaceae
genus: Acetanaerobacterium
species: Acetanaerobacterium elongatum
strain designation: Z7
type strain: yes
Morphology
cell morphology
- @ref: 31285
- gram stain: positive
- cell length: 6 µm
- cell width: 0.3 µm
- cell shape: rod-shaped
- motility: yes
Culture and growth conditions
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 31285 | positive | growth | 20-42 | |
| 31285 | positive | optimum | 37 | mesophilic |
culture pH
| @ref | ability | type | pH |
|---|---|---|---|
| 31285 | positive | growth | 5-7.5 |
| 31285 | positive | optimum | 6.75 |
Physiology and metabolism
oxygen tolerance
- @ref: 31285
- oxygen tolerance: anaerobe
spore formation
- @ref: 31285
- spore formation: no
halophily
| @ref | salt | growth | tested relation | concentration |
|---|---|---|---|---|
| 31285 | NaCl | positive | growth | 0-2 % |
| 31285 | NaCl | positive | optimum | 1 % |
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 31285 | 22599 | arabinose | + | carbon source |
| 31285 | 17057 | cellobiose | + | carbon source |
| 31285 | 28757 | fructose | + | carbon source |
| 31285 | 28260 | galactose | + | carbon source |
| 31285 | 17234 | glucose | + | carbon source |
| 31285 | 17306 | maltose | + | carbon source |
| 31285 | 16634 | raffinose | + | carbon source |
| 31285 | 17814 | salicin | + | carbon source |
| 31285 | 17992 | sucrose | + | carbon source |
| 31285 | 18222 | xylose | + | carbon source |
| 31285 | 4853 | esculin | + | hydrolysis |
enzymes
- @ref: 31285
- value: gelatinase
- activity: +
Isolation, sampling and environmental information
isolation
- @ref: 31285
- sample type: wastewater
isolation source categories
- Cat1: #Engineered
- Cat2: #Waste
- Cat3: #Wastewater
Sequence information
16S sequences
- @ref: 31285
- description: Acetanaerobacterium elongatum strain Z7 16S ribosomal RNA gene, complete sequence
- accession: AY487928
- length: 1533
- database: nuccore
- NCBI tax ID: 258515
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Acetanaerobacterium elongatum CGMCC 1.5012 | GCA_900103835 | scaffold | ncbi | 258515 |
| 66792 | Acetanaerobacterium elongatum strain CGMCC 1.5012 | 258515.18 | wgs | patric | 258515 |
| 66792 | Acetanaerobacterium elongatum CGMCC 1.5012 | 2667527408 | permanent | img | 258515 |
GC content
- @ref: 31285
- GC-content: 50.4
External links
@ref: 31285
culture collection no.: JCM 12359, AS1.5012
straininfo link
| @ref | passport |
|---|---|
| 20218 | http://www.straininfo.net/strains/381685 |
| 20218 | http://www.straininfo.net/strains/381684 |
Reference
| @id | authors | title | doi/url | journal | pubmed | ID_cross_reference |
|---|---|---|---|---|---|---|
| 20215 | D.Gleim, M.Kracht, N.Weiss et. al. | Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since | http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | StrainInfo introduces electronic passports for microorganisms. | 10.1016/j.syapm.2013.11.002 | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 27604 | 10.1099/ijs.0.63212-0 | |||||
| 31285 | Barberan A, Caceres Velazquez H, Jones S, Fierer N. | Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information | 10.1128/mSphere.00237-17 | 27604 | ||
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |