Strain identifier
BacDive ID: 133049
Type strain: 
Species: Methylopila turkensis
Strain Designation: Side1
Strain history: <- N. V. Doronina, Inst. Biochem. Physiol. Microorg., RAS, Pushchino, Russia; Side1
NCBI tax ID(s): 1437816 (species)
General
@ref: 24837
BacDive-ID: 133049
DSM-Number: 27566
keywords: 16S sequence, Bacteria, mesophilic
description: Methylopila turkensis Side1 is a mesophilic bacterium that was isolated from phyllosphere of Bougainvillea sp..
NCBI tax id
- NCBI tax id: 1437816
- Matching level: species
strain history
- @ref: 24837
- history: <- N. V. Doronina, Inst. Biochem. Physiol. Microorg., RAS, Pushchino, Russia; Side1
doi: 10.13145/bacdive133049.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Methylocystaceae
- genus: Methylopila
- species: Methylopila turkensis
- full scientific name: Methylopila turkensis corrig. Shmareva et al. 2017
synonyms
- @ref: 20215
- synonym: Methylopila turkiensis
@ref: 24837
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhizobiales
family: Methylocystaceae
genus: Methylopila
species: Methylopila turkensis
full scientific name: Methylopila turkensis Shmareva et al. 2017
strain designation: Side1
type strain: yes
Culture and growth conditions
culture medium
- @ref: 24837
- name: MEDIUM K (DSMZ Medium 1122)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1122
- composition: Name: MEDIUM K (DSMZ Medium 1122) Composition: Agar 20.0 g/l KH2PO4 2.0 g/l (NH4)2SO4 2.0 g/l NaCl 0.5 g/l MgSO4 x 7 H2O 0.125 g/l FeSO4 x 7 H2O 0.002 g/l Methanol Distilled water
culture temp
- @ref: 24837
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 24837
- sample type: phyllosphere of Bougainvillea sp.
- host species: Bougainvillea
- geographic location: Side region
- country: Turkey
- origin.country: TUR
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Plants | #Shrub (Scrub) |
| #Host Body-Site | #Plant | #Leaf (Phyllosphere) |
taxonmaps
- @ref: 69479
- File name: preview.99_85826.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_5;96_1101;97_1289;98_1553;99_85826&stattab=map
- Last taxonomy: Methylopila
- 16S sequence: KF728382
- Sequence Identity:
- Total samples: 47
- soil counts: 5
- aquatic counts: 2
- animal counts: 38
- plant counts: 2
Safety information
risk assessment
- @ref: 24837
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 24837
- description: Methylopila turkensis strain Side1 16S ribosomal RNA gene, partial sequence
- accession: KF728382
- length: 1368
- database: ena
- NCBI tax ID: 1437816
GC content
- @ref: 24837
- GC-content: 65.4
External links
@ref: 24837
culture collection no.: DSM 27566, VKM B-2748
straininfo link
- @ref: 91316
- straininfo: 401273
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 24837 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-27566 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 27566) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 91316 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID401273.1 |