Strain identifier

BacDive ID: 131314

Type strain: Yes

Species: Streptomonospora tuzyakensis

Strain Designation: BN506

Strain history: <- N. Sahin, Ondokuz Mayis Univ., Dept. of Biology, Kurupelit-Samsun, Turkey; BN506 <- K. Guven

NCBI tax ID(s): 1384037 (species)

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General

@ref: 22541

BacDive-ID: 131314

DSM-Number: 45930

keywords: 16S sequence, Bacteria, mesophilic

description: Streptomonospora tuzyakensis BN506 is a mesophilic bacterium that builds an aerial mycelium and was isolated from saline soil next to a salt lake.

NCBI tax id

  • NCBI tax id: 1384037
  • Matching level: species

strain history

  • @ref: 22541
  • history: <- N. Sahin, Ondokuz Mayis Univ., Dept. of Biology, Kurupelit-Samsun, Turkey; BN506 <- K. Guven

doi: 10.13145/bacdive131314.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Streptosporangiales
  • family: Nocardiopsidaceae
  • genus: Streptomonospora
  • species: Streptomonospora tuzyakensis
  • full scientific name: Streptomonospora tuzyakensis Tatar et al. 2016

@ref: 22541

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Nocardiopsaceae

genus: Streptomonospora

species: Streptomonospora tuzyakensis

full scientific name: Streptomonospora tuzyakensis Tatar et al. 2016

strain designation: BN506

type strain: yes

Morphology

colony morphology

@refcolony colormedium used
69453Beige (1001)ISP 6
69453Ivory (1014)ISP 2
69453Ivory (1014), light ivory (1015)ISP 4
69453Ivory (1014), light ivory (1015)ISP 7
69453Khaki grey (7008)suter without tyrosine
69453Light ivory (1015)ISP 3
69453Light ivory (1015)ISP 5
69453Ochre yellow (1024)suter with tyrosine

multicellular morphology

@refforms multicellular complexcomplex namemedium namecomplex color
69453noAerial myceliumISP 2
69453noAerial myceliumISP 3
69453noAerial myceliumISP 4
69453yesAerial myceliumISP 5Oyster white (1013)
69453noAerial myceliumISP 6
69453noAerial myceliumISP 7
69453noAerial myceliumsuter with tyrosine
69453yesAerial myceliumsuter without tyrosinePure white (9010)

pigmentation

@refproductionname
69453noMelanin
69453nosoluble pigment

multimedia

@refmultimedia contentcaptionintellectual property rights
22541https://www.dsmz.de/microorganisms/photos/DSM_45930.jpgMedium 514 37°C© Leibniz-Institut DSMZ
69453DSM_45930_image3.jpegPlates (514, ISP2, ISP3, ISP4, ISP5, ISP7)Helmholtz-Zentrum für Infektionsforschung GmbH
69453DSM_45930_image4.jpegPlates (514, ISP2, ISP3, ISP4, ISP5, ISP7)Helmholtz-Zentrum für Infektionsforschung GmbH

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
22541BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)yeshttps://mediadive.dsmz.de/medium/514Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
22541GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159)yeshttps://mediadive.dsmz.de/medium/1159Name: GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159) Composition: NaCl 100.0 g/l Agar 15.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

  • @ref: 22541
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

halophily

  • @ref: 69453
  • salt: NaCl
  • growth: positive
  • tested relation: growth
  • concentration: 0-7.5 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6945322599arabinose+growth
6945362968cellulose+/-growth
6945328757fructose+growth
6945317234glucose+growth
6945317268inositol-growth
6945337684mannose+/-growth
6945316634raffinose+growth
6945326546rhamnose+growth
6945317992sucrose+growth
6945318222xylose+growth
6837917632nitrate-reduction
683794853esculin-hydrolysis
6837916199urea-hydrolysis
683795291gelatin+hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379gelatinase+
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase-3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin+3.4.21.1
68382naphthol-AS-BI-phosphohydrolase+
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELGLURIBXYLMANMALLACSACGLYG
69453--++------+--------

API zym

@refAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
69453++/-+/--++/---++/-++/-+-++/-+/---

Isolation, sampling and environmental information

isolation

  • @ref: 22541
  • sample type: saline soil next to a salt lake
  • geographic location: Konya, Tuz Lake (38° 55' 53.68'' N and 33° 13' 54.72''E )
  • country: Turkey
  • origin.country: TUR
  • continent: Asia
  • latitude: 38.9316
  • longitude: 33.2319

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Condition#Saline

taxonmaps

  • @ref: 69479
  • File name: preview.99_45660.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_152;96_2754;97_13042;98_33085;99_45660&stattab=map
  • Last taxonomy: Streptomonospora tuzyakensis subclade
  • 16S sequence: KC959224
  • Sequence Identity:
  • Total samples: 5
  • aquatic counts: 1
  • animal counts: 3
  • plant counts: 1

Safety information

risk assessment

  • @ref: 22541
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 22541
  • description: Streptomonospora tuzyakensis strain BN506 16S ribosomal RNA gene, partial sequence
  • accession: KC959224
  • length: 1490
  • database: ena
  • NCBI tax ID: 1384037

GC content

  • @ref: 22541
  • GC-content: 71.1
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 22541

culture collection no.: DSM 45930, KCTC 29210

straininfo link

  • @ref: 89755
  • straininfo: 400478

literature

  • topic: Phylogeny
  • Pubmed-ID: 26459342
  • title: Streptomonospora tuzyakensis sp. nov., a halophilic actinomycete isolated from saline soil.
  • authors: Tatar D, Guven K, Inan K, Cetin D, Belduz AO, Sahin N
  • journal: Antonie Van Leeuwenhoek
  • DOI: 10.1007/s10482-015-0607-z
  • year: 2015
  • mesh: Actinomycetales/chemistry/*classification/genetics/*isolation & purification/physiology, Base Sequence, Cell Wall/chemistry, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Diaminopimelic Acid/analysis/chemistry, Fatty Acids/analysis, Lakes, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Species Specificity, Turkey
  • topic2: Genetics

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
22541Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-45930Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45930)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
69453Wink, J.Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweighttps://cdn.dsmz.de/wink/DSM%2045930.pdf
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
89755Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID400478.1