Strain identifier

BacDive ID: 12551

Type strain: Yes

Species: Prevotella corporis

Strain Designation: N532-70A, N 532-70A

Strain history: CIP <- 1997, J.P. Carlier, Inst. Pasteur, Paris, France: strain AIP 10111 <- ATCC <- L.V. Holdeman: strain VPI 9342 <- D.W. Lambe Emory: strain N 532-70A

NCBI tax ID(s): 1122981 (strain), 28128 (species)

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General

@ref: 7711

BacDive-ID: 12551

DSM-Number: 18810

keywords: anaerobe, Bacteria, 16S sequence, genome sequence, mesophilic

description: Prevotella corporis Lambe 532-70A is an anaerobe, mesophilic bacterium that was isolated from cervical swab.

strain history: <- CIP <- J.-P. Carlier; AIP 10111 <- ATCC <- L. V. Holdeman; VPI 9342 <- D. W. Lambe; N532-70A

doi: 10.13145/bacdive12551.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidetes
  • domain: Bacteria
  • phylum: Bacteroidetes
  • class: Bacteroidia
  • order: Bacteroidales
  • family: Prevotellaceae
  • genus: Prevotella
  • species: Prevotella corporis
  • full scientific name: Prevotella corporis (Johnson and Holdeman 1983) Shah and Collins 1990

  • synonyms

    • @ref: 20215
    • synonym: Bacteroides corporis

@ref: 7711

domain: Bacteria

phylum: Bacteroidetes

class: Bacteroidia

order: Bacteroidales

family: Prevotellaceae

genus: Prevotella

species: Prevotella corporis

full scientific name: Prevotella corporis (Johnson and Holdeman 1983) Shah and Collins 1990 emend. Hahnke et al. 2016

strain designation: Lambe 532-70A, N532-70A

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
7711CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110), anaerobicyeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium110.pdf
7711COLUMBIA BLOOD MEDIUM (DSMZ Medium 693), anaerobicyeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium693.pdf
39198MEDIUM 20 - for Anaerobic bacteriayesAgar (15.000 g);Glucose (5.000 g);Yeast extract (20.000 g);Tryptone (30.000 g);Cysteine hydrochloride (0.500 g);distilled water (1000.000 ml);Hemin solution -M00149 (25.000 ml)

culture temp

@refgrowthtypetemperaturerange
7711positivegrowth37mesophilic
39198positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 7711
  • oxygen tolerance: anaerobe

API rID32A

@refUREADH Argalpha GALbeta GALbeta GPalpha GLUbeta GLUalpha ARAbeta GURbeta NAGMNERAFGDCalpha FUCNITINDPALArgAProALGAPheALeuAPyrATyrAAlaAGlyAHisAGGASerA
7711-+---+----+-----++-+-+/---+-+/-+-

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinent
7711cervical swabUnited KingdomGBREurope
46244Cervical swab

isolation source categories

Cat1Cat2Cat3
#Infection#Patient#Female
#Infection#Patient#Swab
#Host#Human#Female
#Host Body-Site#Urogenital tract

Safety information

risk assessment

  • @ref: 7711
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Prevotella corporis gene for 16S ribosomal RNA, partial sequence, strain: JCM 8529AB5476771479ena28128
7711Prevotella corporis strain ATCC 33547 16S ribosomal RNA gene, partial sequenceL164651473ena28128

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Prevotella corporis DSM 18810 = JCM 8529GCA_000430525scaffoldncbi1122981
66792Prevotella corporis DSM 18810 = JCM 8529GCA_000613365contigncbi1122981
66792Prevotella corporis MJR7716GCA_001546595scaffoldncbi28128
66792Prevotella corporis DSM 188101122981.3wgspatric1122981
66792Prevotella corporis JCM 85291235812.3wgspatric1122981
66792Prevotella corporis strain MJR771628128.5wgspatric28128
66792Prevotella corporis DSM 188102523533623permanentimg1122981

GC content

  • @ref: 7711
  • GC-content: 44.1
  • method: sequence analysis

External links

@ref: 7711

culture collection no.: DSM 18810, ATCC 33547, CIP 105107, JCM 8529, NCTC 13065, CCUG 15404, AIP 10111, VPI 9342

straininfo link

@refpassport
20218http://www.straininfo.net/strains/692218
20218http://www.straininfo.net/strains/120744
20218http://www.straininfo.net/strains/153896
20218http://www.straininfo.net/strains/184188
20218http://www.straininfo.net/strains/335562

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
7711Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 18810)https://www.dsmz.de/collection/catalogue/details/culture/DSM-18810
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
39198Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/17091
46244Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 15404)https://www.ccug.se/strain?id=15404
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)