Strain identifier

BacDive ID: 12217

Type strain: Yes

Species: Sorangium bulgaricum

Strain Designation: So ce321

Strain history: <- H. Reichenbach, GBF; So ce321

NCBI tax ID(s): 2093423 (species)

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General

@ref: 15008

BacDive-ID: 12217

DSM-Number: 53339

keywords: Gram-negative, mesophilic, spore-forming, Bacteria, rod-shaped

description: Sorangium bulgaricum So ce321 is a spore-forming, mesophilic, Gram-negative Proteobacterium that builds a fruiting body and was isolated from soil with plant residues.

NCBI tax id

  • NCBI tax id: 2093423
  • Matching level: species

strain history: <- H. Reichenbach, GBF; So ce321

doi: 10.13145/bacdive12217.20211221.6

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Deltaproteobacteria
  • order: Myxococcales
  • family: Polyangiaceae
  • genus: Sorangium
  • species: Sorangium bulgaricum
  • full scientific name: Sorangium bulgaricum Mohr et al. 2018

@ref: 15008

domain: Bacteria

phylum: Proteobacteria

class: Deltaproteobacteria

order: Myxococcales

family: Polyangiaceae

genus: Sorangium

species: Sorangium bulgaricum

full scientific name: Sorangium bulgaricum Mohr et al. 2018

strain designation: So ce321

type strain: yes

Morphology

cell morphology

  • @ref: 66744
  • gram stain: negative
  • cell length: 4.0-7.0 µm
  • cell width: 0.7-1.2 µm
  • cell shape: rod-shaped
  • motility: no

colony morphology

@refcolony colormedium usedcolony shape
66744bright orangeP agar
66744bright orangeCY-AGAR
66744bright orangeliquid medium
66744orange-transparentVY/2 AGARcircular

multicellular morphology

  • @ref: 18281
  • forms multicellular complex: yes
  • complex name: fruiting body

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
15008VY/2 AGAR (DSMZ Medium 9)yeshttps://bacmedia.dsmz.de/medium/9Name: VY/2 AGAR (DSMZ Medium 9) Composition: Agar 15.0 g/l Baker's yeast 5.0 g/l CaCl2 x 2 H2O 1.36 g/l Vitamin B12 0.0005 g/l Distilled water
66744CY-AGARyes
66744liquid mediumyes
66744P agaryes
66744VY/2 AGARyes

culture temp

@refgrowthtypetemperaturerange
15008positivegrowth28mesophilic
66744positiveoptimum30mesophilic
66744positivegrowth18-37

culture pH

@refabilitytypepH
66744positiveoptimum7.5
66744positivegrowth6.5-8.0

Physiology and metabolism

spore formation

  • @ref: 66744
  • spore description: 0.7 µm wide and 0.95 µm long
  • type of spore: myxospore
  • spore formation: yes

observation

  • @ref: 66744
  • observation: On CY agar, the strain grows in veins. On VY/2 and Stan21 with filter paper, corrosion is extensive after several weeks. Black sporangioles can be observed on Stan 21 with filter paper after several weeks.

antibiotic resistance

@refChEBImetaboliteis antibioticis sensitivesensitivity conc.is resistantresistance conc.
6674423066cephalosporinyesyes50 µg/mL
6674471321fusidateyesyes50 µg/mL
6674424753hygromycinyesyes50 µg/mL
6674427701oxytetracyclineyesyes50 µg/mL
667449215spectinomycinyesyes50 µg/mL
6674429693thiostreptonyesyes50 µg/mL
6674428971ampicillinyesyes50 µg/mL
6674428669bacitracinyesyes50 µg/mL
6674417833gentamicinyesyes50 µg/mL
667446104kanamycinyesyes50 µg/mL
6674459062polymyxinyesyes50 µg/mL
6674445924trimethoprimyesyes50 µg/mL

enzymes

@refvalueactivityec
66744alpha-fucosidase-3.2.1.51
66744alpha-glucosidase-3.2.1.20
66744alpha-mannosidase-3.2.1.24
66744beta-galactosidase-3.2.1.23
66744beta-glucuronidase-3.2.1.31
66744acid phosphatase+3.1.3.2
66744alkaline phosphatase+3.1.3.1
66744alpha-chymotrypsin+3.4.21.1
66744alpha-galactosidase+3.2.1.22
66744beta-glucosidase+3.2.1.21
66744catalase+1.11.1.6
66744cystine arylamidase+3.4.11.3
66744cytochrome oxidase+1.9.3.1
66744esterase (C 4)+
66744esterase Lipase (C 8)+
66744leucine aminopeptidase+3.4.1.1
66744leucine arylamidase+3.4.11.1
66744lipase (C 14)+
66744N-acetyl-beta-glucosaminidase+3.2.1.52
66744naphthol-AS-BI-phosphohydrolase+
66744trypsin+3.4.21.4
66744valine arylamidase+

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinent
15008soil with plant residuesBulgariaBGREurope
66744soilBulgariaBGREurope

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Host#Plants

Safety information

risk assessment

  • @ref: 15008
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

GC content

  • @ref: 66744
  • GC-content: 71.4
  • method: genome sequence analysis

External links

@ref: 15008

culture collection no.: DSM 53339, NCCB 100640, Soce 321

straininfo link

  • @ref: 20218
  • passport: http://www.straininfo.net/strains/535397

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
15008Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 53339)https://www.dsmz.de/collection/catalogue/details/culture/DSM-53339
18281Reichenbach, H.Collection description and documentation of myxobacteria by H. Reichenbach, HZI (formerly GBF); Collection curr. located at the DSMZ
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66744Kathrin I. Mohr, Corinna Wolf, Ulrich Nübel, Anna K. Szafranska, Matthias Steglich, Fabienne Hennessen, Katja Gemperlein, Peter Kaempfer, Karin Martin, Rolf Möller and Joachim Wink10.1099/ijsem.0.003034A polyphasic approach leads to seven new species of the cellulose-decomposing genus Sorangium, Sorangium ambruticinum sp. nov., Sorangium arenae sp. nov., Sorangium bulgaricum sp. nov., Sorangium dawidii sp. nov., Sorangium kenyense sp. nov., Sorangium orientale sp. nov. and Sorangium reichenbachii sp. nov.IJSEM 68: 3576-3586 201830234476