Edinburgh Research Explorer Experimental crescentic glomerulonephritis

Crescentic glomerulonephritis (CRGN) is a major cause of human kidney failure, but the underlying mechanisms are not fully understood. Wistar Kyoto (WKY) rats are uniquely susceptible to CRGN following injection of nephrotoxic serum, whereas Lewis (LEW) rats are resistant. Our previous genetic studies of nephrotoxic nephritis (NTN), a form of CRGN induced by nephrotoxic serum, identified Fcgr3 and Jund as WKY genes underlying the two strongest quantitative trait loci for NTN phenotypes: Crgn1 and Crgn2 , respectively. We also showed that introgression of WKY Crgn1 or Crgn2 individually into a LEW background did not lead to the formation of glomerular crescents. We have now generated a bicongenic strain, LEW.W Crgn1,2 , in which WKY Crgn1 and C rgn2 are both introgressed into the LEW genetic background. These rats show development of NTN phenotypes, including glomerular crescents. Furthermore, we characterised macrophage function and glomerular cytokine profiles in this new strain. Additionally, we show that LEW.W Crgn1,2 rats are resistant to the development of glomerular crescents that is usually induced following immunisation with recombinant rat α3(IV)NC1, the specific Goodpasture autoantigen located in the glomerular basement membrane against which the immune response is directed in experimental autoimmune glomerulonephritis. Our results show that the new bicongenic strain responds differently to two distinct experimental triggers of CRGN. This is the first time that CRGN has been induced on a normally resistant rat genetic background and identifies the LEW.W Crgn1,2 strain as a new, potentially valuable model of macrophage-dependent glomerulonephritis. on a LEW genetic background, in NTN or EAG studies, were so-far unknown.In this study, we report a new bicongenic rat strain, LEW.W Crgn1,2 , in which the CRGN-susceptible WKY loci ( Crgn1 and Crgn2 ) have been introgressed into a CRGN-resistant LEW genetic background. We investigated susceptibility of this new LEW.W Crgn1,2 strain to two distinct models of macrophage-dependent CRGN (NTN – requiring passive transfer of heterologous nephrotoxic antibodies raised in another species – and EAG – requiring induction of autoimmunity to the GBM) compared with the LEW strain. We found that the presence of these WKY CRGN loci in the LEW. WCrgn1,2 strain led, for the first time, to significant crescent formation, infiltration of macrophages and proteinuria, after a single dose of NTS, in a rat strain with a LEW genetic background. It is important to highlight that the LEW rat strain has been used consistently in NTN studies as a robustly reproducible negative control (Aitman Behmoaras Behmoaras Our findings demonstrate that, when the two CRGN susceptibility loci ( Crgn1 and Crgn2 ) from the WKY strain are introgressed into the LEW strain, this CRGN-resistant strain develops glomerular crescents, a hallmark of CRGN, and that the presence of both Crgn1 and Crgn2 are essential for the development of disease.


INTRODUCTION
Glomerulonephritis (GN) is a major cause of human kidney failure, with the formation of glomerular epithelial crescents being a common feature in its most severe forms. Crescentic glomerulonephritis (CRGN) is characterised by the appearance of glomerular crescents formed by the accumulation of inflammatory cells and proliferating epithelial cells in Bowman's space. Untreated CRGN most often leads to rapidly progressive glomerulonephritis followed by end-stage renal disease (Feehally et al., 2005).
Previously, we studied the genetic susceptibility to NTN in the WKY rat by using segregating populations derived from WKY and LEW rats. Genome-wide linkage analysis carried out on (WKY × LEW) F 2 offspring detected seven significant quantitative trait loci (QTLs) for CRGN susceptibility (Aitman et al., 2006). Of these, two major QTLs, Crgn1 and Crgn2 (logarithm of odds >8), were mapped to chromosome 13 and chromosome 16, respectively.
EAG is a distinct model of crescentic nephritis that, rather than relying on passive transfer of heterologous nephrotoxic antibodies raised in another species, requires induction of autoimmunity to the glomerular basement membrane (GBM). In our laboratory, this is achieved by immunising rats with recombinant non-collagenous domain of the alpha 3 chain of type IV collagen [α3(IV)NC1], the Goodpasture autoantigen, which results in the development of circulating and deposited autoantibodies to this component of the GBM, and consequently CRGN (Ryan et al., 2001). As observed in NTN, the WKY rat strain is exquisitely susceptible to the induction of EAG, and the LEW strain is resistant (Reynolds et al., 2003). In contrast to NTN, however, the first generation (F 1 ; WKY × LEW) remain resistant to the development of EAG, whereas F 1 animals backcrossed to the parental WKY strain (BC 1 ; WKY × F 1 ) show a range of disease responses (Reynolds et al., 2002). These observations suggest that susceptibility to EAG is inherited as a complex trait distinct from susceptibility to NTN, although a recent genome-wide linkage analysis of this BC 1 population revealed a QTL on chromosome 13, again corresponding to Crgn1, linked to the percentage of glomerular crescents in EAG, suggesting at least some shared genetic predisposition (Reynolds et al., 2012).
Here, we show for the first time that the CRGN-resistant LEW rat strain develops glomerulonephritis, after a single dose of NTS, when both Crgn1 and Crgn2 from the CRGN-susceptible WKY are introgressed into its genetic background. We show that the presence of both loci is necessary to promote glomerular crescent formation in this bicongenic strain (LEW.WCrgn1,2). We also show that Crgn1 and Crgn2 alter the expression of key inflammatory cytokines in nephritic glomeruli following NTN induction. In LEW.WCrgn1,2 bone-marrow-derived macrophages (BMDMs), Fc-receptormediated phagocytosis and gene expression differ significantly from the LEW background. Despite showing susceptibility to NTN, the new LEW.WCrgn1,2 strain is resistant to glomerular autoantibody deposition and to EAG. These results demonstrate the importance of macrophage function associated with CRGN and identify the LEW.WCrgn1,2 as a new model of macrophage-dependent CRGN.

RESULTS
LEW.WCrgn1,2 rats show susceptibility to NTN NTN was induced in the WKY, LEW, single congenic (LEW.WCrgn1 and LEW.WCrgn2) (n=6/group) and bicongenic (LEW.WCrgn1,2; n=10) rat strains. After 10 days, glomerular crescents were observed in 90±1.6% of glomeruli in WKY rats, 0% of glomeruli in LEW, LEW.WCrgn1 and LEW.WCrgn2 rats, and, for the first time on a normally NTN-resistant genetic background, introgression of WKY Crgn1 and Crgn2 in LEW rats resulted in 10±4.1% of glomerular crescent formation (Fig. 1A). In conjunction with glomerular crescent formation, prominent infiltration of macrophages into the glomeruli was observed in WKY rats [29±1.7% per glomerular cross section (gcs)], whereas this was minimal in LEW glomeruli (4±0.4% per gcs), LEW.WCrgn1 glomeruli (9±1.9% per gcs) and LEW.WCrgn2 glomeruli (5±0.7% per gcs). There was, however, a statistically significant increase in macrophage infiltration into the glomeruli of the LEW.WCrgn1,2 strain (12±1.2% per gcs; Fig. 1B). In addition, proteinuria levels were measured in the parental WKY and LEW strains as well as in the LEW.WCrgn1,2 strain and single congenic strains. Although differences in proteinuria were significant between the parental LEW and WKY strains, as previously shown (Aitman et al., 2006;Behmoaras et al., 2008), there was no significant difference in proteinuria levels between the LEW and the single congenic strains. There was, however, a highly significant increase in proteinuria in the LEW.WCrgn1,2 rats compared with LEW rats (Fig. 1C). Glomerular crescent formation and macrophage infiltration are illustrated with haematoxylin and eosin (H&E) and immunohistochemical staining for ED-1-positive cells per gcs, respectively (Fig. 1D).

Expression of Tnfα, Nos2 and Mmp12 in glomeruli from LEW.WCrgn1,2 rats following NTN
The key source of the proinflammatory mediators tumour necrosis factor-α (Tnfα) and nitric oxide synthase 2 (Nos2; formerly known as inducible Nos or iNos) in the glomeruli is through the infiltration of macrophages (Cook et al., 1994;Tipping et al., 1991). At 10 days after the induction of NTN, nephritic glomeruli were extracted and the expression levels of glomerular Tnfα and Nos2, analysed by quantitative real-time PCR (qRT-PCR), were used to assess the extent of glomerular macrophage activation. Introgression of Crgn1 and Crgn2 from the CRGN-susceptible WKY into the genetic dmm.biologists.org

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Genetics of rat glomerulonephritis

RESOURCE IMPACT Background
Crescentic glomerulonephritis (CRGN) is a major cause of loss of kidney function, which, if left untreated, can lead to fatal renal failure. The histological features of CRGN, notably the presence of crescent-shaped scars in the glomeruli, are widely recognised; however, the molecular mechanisms underlying the disease are not completely understood. The rat has proven to be an ideal model for studies of different forms of CRGN, because the resulting histology closely resembles that of human CRGN and the molecular phenotypes are largely reproducible. In contrast, mouse models of CRGN suffer drawbacks, namely that the experiments are difficult to standardise and preimmunisation of mice is required. Among the commonly used experimental rat strains, the Wistar Kyoto (WKY) rat strain is susceptible to induction of CRGN, whereas the Lewis (LEW) rat strain is resistant. Two genetic loci (Crgn1 and Crgn2) that are linked to CRGN susceptibility have been identified and congenic strains (strains that carry a specific genomic region from another strain; the remainder of their genome is their own) carrying Crgn1 and/or Crgn2 in either the WKY or LEW genetic background have been generated. These reciprocal congenic strains are valuable resources for studying the effect of these loci on susceptibility to CRGN. Introgressing LEW Crgn1 and Crgn2 loci into the WKY (CRGN-susceptible) genome has been shown to reduce the incidence of disease, but the effects exerted by both WKY Crgn1 and Crgn2 in a LEW (CRGNresistant) genome have not been previously investigated.

Results
The authors generated a new bicongenic rat strain (LEW.WCrgn1,2) by introgressing CRGN-susceptible WKY Crgn1 and Crgn2 into the genetic background of the CRGN-resistant LEW strain. Two distinct forms of CRGN, nephrotoxic nephritis (NTN) and experimental autoimmune glomerulonephritis (EAG), were induced in LEW.WCrgn1,2 rats via passive transfer of heterologous nephrotoxic antibodies raised in another species or induction of autoimmunity to the glomerular basement membrane, respectively. In the NTN model, the introgression of WKY Crgn1 and Crgn2 resulted in disease onset and increased macrophage activity in the normally CRGN-resistant LEW strain. In addition, the gene expression profiles for glomerular cytokines were significantly different in the bicongenic rat strain affected by NTN compared with the parental LEW strain. Interestingly, the new bicongenic rat strain did not show signs of disease in the EAG model, indicating that resistance to this form of CRGN is retained.

Implications and future directions
These results indicate differential responses of the new bicongenic rat strain to the induction of NTN and EAG, suggesting that different mechanisms drive these distinct forms of CRGN. The study substantiates previous evidence that macrophage activation is an important aspect of disease development, and provides new insights into the genes and pathways involved in macrophagedependent CRGN. This is the first time that CRGN has been successfully induced in the normally resistant LEW strain; the resulting experimental model could be useful for the identification of additional CRGN-associated loci. Furthermore, the model could enable dissection of the mechanisms underlying progression from serological autoimmunity to glomerular damage and EAG, to which the strain is resistant.
background of the CRGN-resistant LEW significantly increased glomerular Tnfα and Nos2 levels compared with the parental LEW strain ( Fig. 2A,B). In addition, we assessed glomerular expression of matrix metalloproteinase-12 (Mmp12), a protease associated with the degradation of GBM, as a readout of NTN-mediated glomerular inflammation and showed that Mmp12 was significantly overexpressed in LEW.WCrgn1,2 rat nephritic glomeruli when compared with parental LEW rats (Fig. 2C).

LEW.WCrgn1,2 rats show resistance to EAG
EAG was induced by immunisation with recombinant rat α3(IV)NC1. Disease in this model has a more gradual onset relative to NTN, reflecting the time required for adaptive immune responses to be initiated; as a result, animals were observed for 28 days following disease induction. As previously reported (Reynolds et al., 2003), the WKY rat strain was susceptible to the induction of EAG, and all animals showed marked crescent formation, glomerular macrophage infiltration and proteinuria by day 28. The LEW strain was entirely resistant to induction of EAG, with no animals demonstrating features of disease. The LEW.WCrgn1,2 bicongenic rat strain was also resistant, showing no significant differences from the parental LEW strain in all three phenotypic disease parameters ( Fig. 3A-C). All three strains had similar levels of circulating anti-GBM antibodies (Fig. 3D), although significant levels of deposited anti-GBM antibodies, as demonstrated by direct immunofluorescence, were found in the WKY strain alone (Fig. 3E,F).

Measurement of Fc-receptor-dependent and -independent macrophage activation in the LEW.WCrgn1,2 strain
To examine the combined effect of these loci on the functional phenotype of BMDMs, we carried out activation assays that could reflect the activity of BMDMs in vivo. Superoxide anion is a reactive oxygen species produced by phagocytes such as macrophages in response to appropriate stimuli. Levels of superoxide produced by BMDMs from WKY, LEW and LEW.WCrgn1,2 rats were detected by chemiluminescence following stimulation with phorbol 12myristate 13-acetate (PMA) (Fig. 4A). The kinetics of superoxide production were significantly different between the WKY versus the LEW and LEW.WCrgn1,2 strains, because WKY BMDMs produced superoxide at an earlier time-point after stimulation compared with the LEW and LEW.WCrgn1,2 BMDMs (Fig. 4A). (D)H&E staining (upper panels) and ED-1 (CD68) immunohistochemistry (lower panels) of glomeruli 10 days after injection with NTS. The H&E stain showed crescentic glomeruli in WKY rats and, for the first time, formation of glomerular crescents in a LEW-derived strain (LEW.WCrgn1,2), whereas LEW rats were resistant to crescent formation. ED-1 immunohistochemistry also showed a significant influx of glomerular macrophages in the LEW.WCrgn1,2 strain.

RESOURCE ARTICLE
There was, however, no significant difference in superoxide production between the bicongenic LEW.WCrgn1,2 and parental LEW BMDMs. Macrophage activation was also analysed using Fcmediated phagocytosis (Fig. 4B,C). Notably, there was a significant difference in phagocytic activity between the LEW and LEW.WCrgn1,2 strains. These data indicate that introgressing both WKY Crgn1 and Crgn2 into the genetic background of the LEW strain had an effect on Fc-mediated phagocytosis but not on PMA-mediated superoxide production.

Expression of Nos2, Arg1, Il10, Lilrb3l and Nov in BMDMs
Macrophages have been broadly classified according to their activation phenotypes as M1 or M2 macrophages. M1 macrophages are capable of secreting proinflammatory mediators such as cytokines and are strongly microbicidal, whereas M2 macrophages secrete anti-inflammatory cytokines, promoting wound-healing, immune regulation and resolution of inflammation (Mosser and Edwards, 2008). We have previously determined the macrophage transcriptome of NTN-susceptible WKY and NTN-resistant LEW rats by identifying ~700 differentially expressed transcripts between the BMDMs of the two strains (Maratou et al., 2011). To examine the effect of LEW Crgn1 and Crgn2 on the macrophage transcriptome, we assessed the expression of M1 and M2 markers (Nos2 and Il10, respectively), as well as the most robustly differentially expressed transcripts (Arg1, Lilrb3l and Nov) between WKY and LEW BMDMs. Analysis of expression levels was carried out by qRT-PCR of mRNA from BMDMs either stimulated with lipopolysaccharide (LPS, 100 ng, 4 hours) (Nos2,Il10,Arg1,Lilrb3l) or in the basal state (Nov). There was significantly enhanced expression of the proinflammatory cytokine Nos2 in LEW.WCrgn1,2 BMDMs compared with the CRGN-resistant LEW parental strain (Fig. 5A). The presence of Crgn1 and Crgn2 in LEW.WCrgn1,2 rats significantly lowered the expression of the antiinflammatory cytokine Il10 to levels similar to that in the CRGNsusceptible WKY strain (Fig. 5B). Introgression of Crgn1 and Crgn2 also caused a reduction in the levels of Lilrb3l and Nov (Fig. 5C,D), and conversely showed an increased trend in levels of Arg1 in BMDMs from LEW.WCrgn1,2 rats compared with expression levels from parental LEW BMDMs in the same condition (Fig. 5E).

DISCUSSION
GN is a leading cause of human kidney failure, but the underlying pathogenesis is incompletely understood. The WKY model has contributed substantially to understanding the molecular basis of CRGN, with identification of Fcgr3 and Jund as susceptibility genes (Aitman et al., 2006;Behmoaras et al., 2008). We report here the generation and phenotypic characterisation of a new rat model of CRGN, on the normally resistant LEW genetic background. We dmm.biologists.org
replaced the LEW alleles for Fcgr3 and Jund with the corresponding WKY alleles, creating a new bicongenic strain, LEW.WCrgn1,2, and found that this strain is susceptible to NTN, including the development of glomerular crescents, but is resistant to the related CRGN phenotype EAG. Characterisation of cytokine profiles and functional testing of the LEW.WCrgn1,2 glomeruli and macrophages provide preliminary insights into the genes and pathways leading to development of CRGN in this new model.
Our earlier research focussed on the genetic dissection of CRGN in segregating populations derived from the CRGN-susceptible and CRGN-resistant rat strains, WKY and LEW, respectively. The two CRGN susceptibility loci, Crgn1 and Crgn2, identified by genomewide linkage analysis and functional studies, showed the deletion of Fcgr3-rs to be the cause of macrophage overactivity at Crgn1 (Aitman et al., 2006), and, subsequently, the marked upregulation of Jund at Crgn2 was associated with increased macrophage activation (Behmoaras et al., 2008;Hull et al., 2013).
In addition, we have described the effects of NTN on a double congenic rat strain for chromosomes 13 and 16 (WKY.LCrgn1,2) generated by introgressing LEW Crgn1 and Crgn2 into the genetic background of the WKY strain. The LEW Crgn1 and Crgn2 loci conferred marked additive protective effects on NTN phenotypes in WKY.LCrgn1,2 rats, as seen by a significant reduction in glomerular crescent formation, macrophage infiltration and proteinuria compared with parental WKY rats. The WKY.LCrgn1,2 strain also showed reduced levels of glomerular cytokines, protease production and Nos2, as well as reduced macrophage activation (Behmoaras et al., 2010). Although this study by Behmoaras et al.  on a LEW genetic background, in NTN or EAG studies, were sofar unknown.
In this study, we report a new bicongenic rat strain, LEW.WCrgn1,2, in which the CRGN-susceptible WKY loci (Crgn1 and Crgn2) have been introgressed into a CRGN-resistant LEW genetic background. We investigated susceptibility of this new LEW.WCrgn1,2 strain to two distinct models of macrophagedependent CRGN (NTN -requiring passive transfer of heterologous nephrotoxic antibodies raised in another speciesand EAG -requiring induction of autoimmunity to the GBM) compared with the LEW strain. We found that the presence of these WKY CRGN loci in the LEW.WCrgn1,2 strain led, for the first time, to significant crescent formation, infiltration of macrophages and proteinuria, after a single dose of NTS, in a rat strain with a LEW genetic background. It is important to highlight that the LEW rat strain has been used consistently in NTN studies as a robustly reproducible negative control (Aitman et al., 2006;Behmoaras et al., 2008;Behmoaras et al., 2010;Hull et al., 2013;Maratou et al., 2011;Page et al., 2012;Smith et al., 2007). Our findings demonstrate that, when the two CRGN susceptibility loci (Crgn1 and Crgn2) from the WKY strain are introgressed into the LEW strain, this CRGN-resistant strain develops glomerular crescents, a hallmark of CRGN, and that the presence of both Crgn1 and Crgn2 are essential for the development of disease.
Macrophages are well recognised mediators of glomerular injury in CRGN (Cattell, 1994;Cook et al., 1999;Duffield, 2010;Isome et al., 2004;Williams et al., 2010), and the importance of macrophage number and activity within the glomerulus for crescent formation and disease progression has been previously established in rat models of CRGN (Behmoaras et al., 2010;Isome et al., 2004;Munger et al., 1999). The presence of the proinflammatory cytokines Tnfα and Nos2 in the glomerulus comes largely from infiltrating macrophages (Cook et al., 1994;Tipping et al., 1991). Furthermore, Mmp12, which is secreted by macrophages, enables degradation of extracellular matrix components, such as those of the GBM (Kaneko et al., 2003). We found that the expression of Tnfα, Nos2 and Mmp12 was significantly increased in the nephritic glomeruli of LEW.WCrgn1,2 rats compared with parental LEW rats. Interestingly, levels of nephritic glomerular Tnfα in the LEW.WCrgn1,2 rats were comparable with those in WKY rats, despite a significant difference in infiltrating macrophage numbers into the glomeruli between the two strains, suggesting that glomerular Tnfα levels might indicate macrophage activation rather than infiltration.
In order to assess and compare the functional phenotype of macrophages from the WKY, LEW and bicongenic LEW.WCrgn1,2 strains, we carried out two tests, namely, a superoxide anion detection assay and an Fc-mediated bead phagocytosis assay. Superoxide, a reactive oxygen species, is produced by activated phagocytes, such as macrophages, as part of their biological defence mechanism (Babior et al., 1973;Robinson, 2009). In vitro, macrophages can be stimulated to generate superoxide by PMA. PMA, a phorbol ester, is a potent inflammatory and tumour-producing compound, capable of mimicking diacylglycerol, thereby activating the protein kinase C signalling pathway (Castagna et al., 1982;Driedger and Blumberg, 1980;White et al., 1984). The overproduction of superoxide often leads to tissue injury at sites of inflammation (Halliwell and  BMDMs with beads opsonised with rabbit anti-BSA IgG, or unopsonised for 30 minutes. Cells were then fixed and beads in 100 BMDMs were counted (n=4 in all strains). *P<0.05 between LEW.WCrgn1,2 and LEW rats using one-way ANOVA with Newman-Keuls comparison test. Gutteridge, 2006). Furthermore, superoxide produced by macrophages has been reported to be a prominent contributor to glomerular injury in glomerulonephritis (Cook et al., 1989). Here, we measured superoxide produced by BMDMs from WKY, LEW and LEW.WCrgn1,2 rats by chemiluminescence. Although the amount and the kinetics of superoxide production differed significantly between the WKY and LEW BMDMs, there was no difference between the LEW and the LEW.WCrgn1,2 BMDMs, indicating that WKY Crgn1 and Crgn2 had no influence on the protein kinase C signalling pathway, when introgressed into a LEW genetic background.
Fc receptors for IgG (Fcgr) have been shown to facilitate phagocytosis and antibody-dependent cellular cytotoxicity in rodent macrophages (Aitman et al., 2006;Behmoaras et al., 2008;Behmoaras et al., 2010;Mosser and Zhang, 2008). We have previously shown that the absence of an Fc-related sequence (Fcgr3-rs) causes macrophage overactivity and NTN susceptibility in the WKY strain, whereas, conversely, the LEW strain, which has Fcgr3-rs, is resistant to NTN and shows no macrophage overactivity (Aitman et al., 2006;Page et al., 2012). Consistent with this, Fcmediated bead phagocytosis levels were higher in WKY BMDMs than in LEW BMDMs. Notably, by introgressing the WKY Fcgr3 gene in the Crgn1 locus, along with Crgn2, into the genetic background of the LEW strain, we observed an increase in phagocytosis in LEW.WCrgn1,2 BMDMs, reflecting macrophage activation in this strain brought about by the synergistic influence of Crgn1 and Crgn2.
In the NTN model, Crgn1 and Crgn2 exert their influence chiefly on bone-marrow cells, specifically BMDMs, rather than on intrinsic renal cells (Behmoaras et al., 2010). Because of this, we analysed the effects of WKY Crgn1 and Crgn2 in LEW.W.Crgn1,2 rats on BMDM gene expression and found that these two CRGN susceptibility loci caused a significant increase in expression of the proinflammatory cytokine Nos2, and conversely a reduction in expression of the anti-inflammatory cytokine Il10, when compared with parental LEW BMDMs. Our previous work characterised macrophage transcriptomes of the WKY and LEW strains, which revealed highly significant differentially expressed genes between WKY and LEW BMDMs (in basal or LPS-stimulated states) that are in effector pathways for macrophage-mediated damage in CRGN (Maratou et al., 2011). We found that, in LEW.WCrgn1,2 BMDMs, there was a significant decrease in expression levels of genes that are normally overexpressed in LEW BMDMs (Lilrb3l, Nov) and conversely an increasing trend of Arg1 expression (normally overexpressed in WKY BMDMs) in LEW.WCrgn1,2 BMDMs compared with LEW BMDMs. This correlates with the important effects exerted by WKY Crgn1 and Crgn2 on the LEW genome, whereby the introgression of these CRGN susceptibility QTLs causes the LEW BMDMs to have a similar phenotype to that of the WKY strain.

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Genetics of rat glomerulonephritis Expression analyses were carried out by qRT-PCR. ***P<0.001; **P<0.01; P was non-significant (ns) between LEW.WCrgn1,2 and LEW rats using one-way ANOVA with Newman-Keuls comparison test. n=4 biological rats per strain with three technical replicates per rat. BMDMs were untreated (basal) or stimulated with 100 ng LPS for 4 hours.

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In contrast to NTN, the bicongenic LEW.WCrgn1,2 strain was resistant to EAG. Interestingly, previous work by our group has shown that WKY.LCrgn1 single congenic animals show significant protection from disease in EAG (Reynolds et al., 2012). The failure to confer susceptibility to EAG in the bicongenic LEW.WCrgn1,2 strain, however, confirms our previous observation that susceptibility to EAG has a different mode of inheritance to NTN (Reynolds et al., 2002), with likely roles for additional susceptibility loci. It is intriguing that both LEW.WCrgn1,2 and parental LEW rats make similar levels of circulating anti-GBM antibodies to WKY rats, but do not show significant deposition on the GBM. We can hypothesise a number of possible reasons. Firstly, it might be that the antibodies differ between strains in terms of epitope specificity, affinity or IgG subclass. Secondly, there might be differences in accessibility of the epitopes in the GBM between strains, perhaps related to concomitant T-cell-mediated injury in the WKY strain; however, anti-GBM antibodies eluted from the kidneys of WKY rats can bind to the GBM of LEW rats (Reynolds et al., 2012). The failure of the bicongenic LEW.WCrgn1,2 strain, like LEW, to develop deposited autoantibody in the glomerulus suggests that EAG susceptibility is most likely under the influence of additional WKY loci that control glomerular autoantibody deposition. These loci must reside outside the rat MHC, because WKY and LEW strains share a common RT-1 haplotype (RT1 l ). The identification of these additional loci that confer protection in LEW and LEWrelated strains, yet susceptibility in the WKY strain, is the subject of our ongoing work.
Our future work aims to investigate the effect of WKY Crgn1 and Crgn2 in the bicongenic strain across the entire transcriptome. The LEW.WCrgn1,2 strain will also provide the basis for future work to define the mechanisms underlying the progression from serological autoimmunity (which is shown in the LEW.WCrgn1,2 strain), through glomerular autoantibody deposition (absent in the LEW.WCrgn1,2 strain), to glomerular inflammation (absent in the LEW.WCrgn1,2 strain, but to which it is critically susceptible, unlike the parental LEW strain).
In conclusion, our study has shown, for the first time, the formation of glomerular crescents in NTN in a rat strain with a LEW genetic background, which is normally resistant to NTN. Despite showing susceptibility to NTN, the new bicongenic LEW.WCrgn1,2 strain is resistant to glomerular autoantibody deposition and to EAG. These data emphasise the importance of Crgn1 and Crgn2 on NTN susceptibility and show the potential value of the LEW.WCrgn1,2 strain for future studies of macrophagedependant glomerulonephritis.

MATERIALS AND METHODS Generation of congenic rat strains
Parental WKY (WKY/NCrl) and LEW (LEW/Crl) rats were purchased from Charles River. Generation of the bicongenic rat strain, LEW.WCrgn1,2, was achieved as follows: single congenic strains LEW.WCrgn1 and LEW.WCrgn2 (Behmoaras et al., 2008) were crossed to produce an F 1 population that was then backcrossed to LEW.WCrgn1. Backcross animals that were heterozygous for Crgn2 and homozygous for Crgn1 were selected and crossed by brother-sister mating to obtain animals that were bicongenic for WKY Crgn1 and Crgn2 on a LEW genetic background. The congenic intervals and microsatellite markers used for genotyping were as described previously (Behmoaras et al. 2010), with the difference being the reversal of donor and recipient strains used in the present study. All procedures were performed in accordance with the United Kingdom Animals (Scientific Procedures) Act, 1986. NTN and nephritic glomeruli isolation NTS was prepared as previously described (Bhan et al., 1978). NTN was induced in 8-week-old male WKY, LEW, LEW.WCrgn1, LEW.WCrgn2 and LEW.WCrgn1,2 rats by intravenous injection of 0.1 ml of NTS. Nine days later, urine was collected by placing rats in metabolic cages for 24 hours with free access to food and water. Proteinuria was determined by the sulphosalicylic acid test (Baker et al., 1998). Ten days after NTN induction, rats were culled by asphyxiation with CO 2 and cervical dislocation, glomeruli were isolated from one kidney each from all strains (four rats per strain) while the other kidney from all strains was formalin-fixed and paraffin embedded. Glomerular isolation was carried out as described (Deplano et al., 2013). Glomerular pellets were then resuspended in TRIzol® (Invitrogen).

Induction and assessment of EAG
Six-week-old female WKY, LEW and LEW.WCrgn1,2 rats were immunized with 0.5 mg/kg recombinant rat α3(IV)NC1 in complete Freund's adjuvant by intramuscular injection. After 28 days, urine, serum and tissues were collected and proteinuria determined as described for NTN animals. Serum anti-GBM antibody concentrations were assayed as described previously (Ryan et al., 2001). Glomerular deposition of anti-GBM antibodies was detected by direct immunofluorescence (Reynolds et al., 2012).

Histology and immunohistochemistry
To quantify the degree of histological injury in both the NTN and EAG models, 4 μm formalin-fixed paraffin-embedded kidney sections were stained with H&E and periodic acid-Schiff (PAS). 100 consecutive glomeruli were assessed in a blinded manner, and the number of severely crescentic glomeruli expressed as a percentage of total glomeruli examined. To quantify the number of macrophages that infiltrated into glomeruli, formalin-fixed paraffin-embedded kidney sections were stained with mouse monoclonal antibody to ED-1 (Serotec, Oxford, UK), followed by an HRP-labelled anti-mouse polymer development system (Dako Ltd, UK). The cellular infiltrate in 20 consecutive glomeruli was quantified using automated image analysis software (ImagePro Plus, Media Cybernetics, Bethesda, MD) and expressed as a percentage of total glomerular cross-sectional area.
The reactive oxygen species, superoxide anion, was assessed by a chemiluminescence assay (LumiMax Superoxide Anion Detection Kit, Stratagene), wherein relative luminescence units (RLU) corresponded to superoxide levels produced by BMDMs. Briefly, day-5 BMDMs were dissociated using cell dissociation solution (Sigma) and allowed to adhere overnight to a 96-well optical bottom plate (Nunc) at a cell density of 2.5×10 5 cells per well with BMDMs plated from four rats/strain in triplicate. Prior to the assay, cells were washed and PMA (1 μM; Sigma) was used to generate superoxide production by BMDMs. A time-dependent increase in chemiluminescence was detected using the Fluostar Galaxy plate reader (BMG Labtech) and the RLU values were detected for a total period of 100 minutes.

RNA extraction and real-time quantitative RT-PCR
Total RNA was extracted from nephritic glomeruli and BMDMs using the TRIzol® method, which was then quantified using the NanoDrop®ND-1000 Spectrophotometer (Thermo Scientific). Realtime quantitative RT-PCR was carried out using the 7500 Fast Real Time PCR System (Applied Biosystems) and the Brilliant® SYBR® Green QRT-PCR kit (Agilent Technologies). 100 ng of total RNA was utilised for qRT-PCR, with each sample amplified in duplicate. Samples were first subjected to reverse transcription (30 minutes at 50°C and 10 minutes at 95°C) followed by cycling 40 times at 95°C for 15 seconds and 60°C for 1 minute. Primer sequences are available upon request. Results obtained were exported to the 7500 Fast System SDS software (Applied Biosystems), where C t values were determined and normalised to glyceraldehyde-3-phosphate dehydrogenase gene expression. Relative expression levels were then determined using the 2 -ΔΔCt method.

Statistical analysis
Results are expressed as mean ± s.e.m. Statistical differences in mean values between the bicongenic LEW.WCrgn1,2 strain and parental LEW rats were compared using a one-way ANOVA with Newman-Keuls comparison test.

Deposition of resource in a repository
The new bicongenic LEW.WCrgn1,2 rat strain will be available as a resource from the National BioResource Project (NBRP) -Rat, Kyoto University, Kyoto Japan.