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Epigenetic mutagenesis as program of age-related protein dysfunction and aging

  • Mechanisms of Normal and Pathological Tissue Development
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Abstract

DNA methylation plays an important polyfunctional role in ontogenesis of human and mammals. A steep rise in probability of mutational substitution of CpG dinucleotide by TpG dinucleotide in the genome is one of the consequences of DNA methylation. All spectrum (17) of possible DNA and protein mutations caused by CpG-dinucleotide methylation in DNA were characterized, and the three most dangerous mutations able to result in protein inactivation were isolated. The computer program that allows one to predict all most probable mutations in the analyzed gene and encoded protein was created. On the example of genes from humans and various mammals, it was demonstrated that the amount of potentially dangerous sites of epigenetic mutagenesis in exons was drastically decreased as a result of genome evolution. But, at the same time, unforced preservation of such sites and their persistence were established, indicating the occurrence of age-related protein dysfunction built into the genome epigenetic program, resulting in apoptosis and aging; this program is based on the set and position of methylated codons in exonic gene regions. It is assumed that the program of epigenetic mutagenesis limits the lifetime of an individual, accelerating the deliverance of the population from long-lived individuals that completed the reproductive period.

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References

  • Anisimov, V.N., Molekulyarnye i fiziologicheskie mekhanizmy stareniya (Molecular and Physiological Mechanisms of Aging), St. Petersburg: Nauka, 2008, vol. 1.

    Google Scholar 

  • Bernstein, C. and Bernstein, H., Aging, Sex, and DNA Repair, San Diego: Acad. Press, Inc., 1991.

    Google Scholar 

  • Flindt, R., Biologie in Zahlen, Stuttgart: Gustav Fischer Verlag, 1988.

    Google Scholar 

  • Cáceres, E.F. and Hurst, L.D., The evolution, impact and properties of exonic splice enhancers, Genome Biol., 2013, vol. 14, p. R143.

    Article  PubMed Central  PubMed  Google Scholar 

  • Calvanese, V., Lara, E., Kahn, A., and Fraga, M.F., The role of epigenetics in aging and age-related diseases, Ageing Res. Rev., 2009, vol. 8, pp. 268–276.

    Article  CAS  PubMed  Google Scholar 

  • Chelikani, P., Fita, I., and Loewen, P.C., Diversity of structures and properties among catalases, Cell. Mol. Life Sci., 2004, vol. 61, pp. 192–208.

    Article  CAS  PubMed  Google Scholar 

  • Conticello, S.G., The AID/APOBEC family of nucleic acid mutators, Genome Biol., 2008, vol. 9, p. 229.

    Article  PubMed Central  PubMed  Google Scholar 

  • Cooper, D.N. and Youssoufian, H., The CpG dinucleotide and human genetic disease, Hum. Genet., 1988, vol. 78, pp. 151–155.

    Article  CAS  PubMed  Google Scholar 

  • Danilenko, N.G. and Davydenko, O.G., Miry genomov organell (Worlds Genomes of Organelles), Minsk: Tekhnalogiya, 2003.

    Google Scholar 

  • Fritz, E.L. and Papavasiliou, F.N., Cytidine deaminases: aiding DNA demethylation?, Genes Dev., 2010, vol. 24, pp. 2107–2114.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Longo, V.D., Mitteldorf, J., and Skulachev, V.P., Programmed and altruistic ageing, Nature Rev. Genet., 2005, vol. 6, pp. 866–872.

    Article  CAS  PubMed  Google Scholar 

  • Mazin, A.L. and Vanyushin, B.F., The loss of CpG dinucleotides from DNA. I. Methylated and unmethylated compartments of genome in eukaryotes with different content of 5-methylcytosine in DNA, Mol. Biol., 1987, vol. 21, pp. 543–551.

    CAS  Google Scholar 

  • Mazin, A.L., Suicidal function of DNA methylation in agerelated genome disintegration, Ageing Res. Rev., 2009, vol. 8, pp. 314–327.

    Article  CAS  PubMed  Google Scholar 

  • Mazzio, E.A. and Soliman, K.F., Basic concepts of epigenetics: impact of environmental signals on gene expression, Epigenetics, 2012, vol. 7, pp. 119–130.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Petit, V., Vartanian, J.-P., and Wain-Hobson, S., Powerful mutators lurking in the genome, Philos. Trans. R. Soc. London B, 2009, vol. 364, pp. 705–715.

    Article  CAS  Google Scholar 

  • Ren, J., Li, Q., Wu, S., et al., Cardiac overexpression of antioxidant catalase attenuates aging-induced cardiomyocyte relaxation dysfunction, Mech. Ageing Dev., 2007, vol. 128, pp. 276–285.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Romanov, G.A. and Vanyushin, B.F., DNA methylation in eukaryotes I. Methylated sequences and DNA methyltransferases, Nauch. Dokl. Vyssh. Shkoly, Biol. Nauki, 1980, no. 11, pp. 5–20.

    Google Scholar 

  • Romanov, G.A. and Vanyushin, B.F., Methylation of reiterated sequences in mammalian DNAs. Effects of the tissue type, age, malignancy and hormonal induction, Biochim. Biophys. Acta, 1981, vol. 653, pp. 204–218.

    Article  CAS  PubMed  Google Scholar 

  • Schriner, S.E., Linford, N.J., Martin, G.M., et al., Extension of murine life span by overexpression of catalase targeted to mitochondria, Science, 2005, vol. 308, pp. 1909–1911.

    Article  CAS  PubMed  Google Scholar 

  • Trindade, L.S., Aigaki, T., Peixoto, A.A., Balduino, A., Manica da Cruz, I.B., and Heddle, J.G., A novel classification system for evolutionary aging theories, Front. Genetics, 2013, vol. 4, part. 25.

  • Vanyushin, B.F., Enzymatic DNA methylation is an epigenetic control for genetic functions of the cell, Biochemistry (Moscow), 2005, vol. 70, no. 5, pp. 488–499.

    Article  CAS  Google Scholar 

  • Wolters, S. and Schumacher, B., Genome maintenance and transcription integrity in aging and disease, Front. Genetics, 2013, vol. 4, part. 19.

  • Wu, S., Li, Q., Du, M., et al., Cardiac-specific overexpression of catalase prolongs life-span and attenuates ageing-induced cardiomyocyte contractile dysfunction and protein damage, Clin. Exp. Pharmacol. Physiol., 2007, vol. 34, pp. 81–87.

    Article  PubMed  Google Scholar 

  • Ying, H. and Huttley, G., Exploiting CpG hypermutability to identify phenotypically significant variation within human protein-coding genes, Genome Biol. Evol., 2011, vol. 3, pp. 938–949.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  • Zamocky, M., Furtmüller, P.G., and Obinger, C., Evolution of catalases from bacteria to humans, Antioxid. Redox Signal., 2008, vol. 10, pp. 1527–1548.

    Article  PubMed Central  CAS  PubMed  Google Scholar 

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Correspondence to G. A. Romanov.

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Original Russian Text © G.A. Romanov, V.S. Sukhoverov, B.F. Vanyushin, 2015, published in Ontogenez, 2015, Vol. 46, No. 2, pp. 102–113.

In this work, the term “Epigenetic mutagenesis” means mutagenesis of proteins caused by methylation of coding DNA.

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Romanov, G.A., Sukhoverov, V.S. & Vanyushin, B.F. Epigenetic mutagenesis as program of age-related protein dysfunction and aging. Russ J Dev Biol 46, 78–87 (2015). https://doi.org/10.1134/S106236041502006X

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  • DOI: https://doi.org/10.1134/S106236041502006X

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