Skip to main content
Log in

Impact of delivery method on antiviral activity of phosphodiester, phosphorothioate, and phosphoryl guanidine oligonucleotides in MDCK cells infected with H5N1 bird flu virus

  • Structural and Functional Analysis of Biopolymers and Their Complexes
  • Published:
Molecular Biology Aims and scope Submit manuscript

Abstract

We have previously described nanocomposites containing conjugates or complexes of native oligodeoxyribonucleotides with poly-L-lysine and TiO2 nanoparticles. We have shown that these nanocomposites efficiently suppressed influenza A virus reproduction in MDCK cells. Here, we have synthesized previously undescribed nanocomposites that consist of TiO2 nanoparticles and polylysine conjugates with oligonucleotides that contain phosphoryl guanidine or phosphorothioate internucleotide groups. These nanocomposites have been shown to exhibit antiviral activity in MDCK cells infected with H5N1 influenza A virus. The nanocomposites containing phosphorothioate oligonucleotides inhibited virus replication ~130-fold. More potent inhibition, i.e., ~5000-fold or ~4600-fold, has been demonstrated by nanocomposites that contain phosphoryl guanidine or phosphodiester oligonucleotides, respectively. Free oligonucleotides have been nearly inactive. The antiviral activity of oligonucleotides of all three types, when delivered by Lipofectamine, has been significantly lower compared to the oligonucleotides delivered in the nanocomposites. In the former case, the phosphoryl guanidine oligonucleotide has appeared to be the most efficient; it has inhibited the virus replication by a factor of 400. The results make it possible to consider phosphoryl guanidine oligonucleotides, along with other oligonucleotide derivatives, as potential antiviral agents against H5N1 avian flu virus.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Abbreviations

DMAPO:

4-dimethylaminopyridin N-oxide

Dmi:

1,3-dimethyl-2-imidazolidineimino group

TiO2 · PL-PO:

TiO2 · PL-PS, or TiO2 · PL-PG, nanocomposites consisting of TiO2 nanoparticles and polylysine conjugates with phosphodiester (PO), phosphoryl guanidine (PG), or phosphorothioate (PS)

References

  1. Belikova A.M., Zarytova V.F., Grineva N.I. 1967. Synthesis of ribonucleosides and diribonucleoside phosphates containing 2-chloroethylamine and nitrogen mustard residues. Tetrahedron Lett. 37, 3557–3562.

    Article  CAS  PubMed  Google Scholar 

  2. Zamecnik P., Stephenson M. 1978. Inhibition of Rous sarcoma virus replication and cell transformation by a specific oligodeoxynucleotide. Proc. Natl. Acad. Sci. U. S. A. 75, 280–284.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  3. Roehr B. 1998. Fomivirsen approved for CMV retinitis. J. Int. Assoc. Physicians AIDS Care. 4, 14–16.

    CAS  PubMed  Google Scholar 

  4. Juliano R.L., Ming X. Nakagawa O. 2012. Cellular uptake and intracellular trafficking of antisense and siRNA oligonucleotides. Bioconjugate Chem. 23, 147–157.

    Article  CAS  Google Scholar 

  5. Parveen S., Misra R., Sahoo S.K. 2012. Nanoparticles: A boon to drug delivery, therapeutics, diagnostics and imaging. Nanomedicine. 8, 147–166.

    Article  CAS  PubMed  Google Scholar 

  6. Levina A., Ismagilov Z., Repkova M., Shikina N., Baiborodin C.I., Shatskaya N.V., Zagrebelnyi S.N., Zarytova V.F. 2013. Design of TiO2~DNA nanocomposites for penetration into cells. Russ. J. Bioorg. Chem. 39 (1), 77–86.

    Article  CAS  Google Scholar 

  7. Levina A., Ismagilov Z., Repkova M., Shatskaya N., Shikina N., Tusikov F., Zarytova V. 2012. Design of nanocomposites consisting of titanium dioxide nanoparticles and oligonucleotides. J. Nanosci. Nanotechnol. 12, 1812–1820.

    Article  CAS  PubMed  Google Scholar 

  8. Levina A.S., Repkova M.N., Ismagilov Z.R., Shikina N.V., Malygin E.G., Mazurkova N.A., Zinov’ev V.V., Evdokimov A.A., Baiborodin S.I., Zarytova V.F. 2012. High-performance method for specific effect on nucleic acids in cells using TiO2~DNA nanocomposites. Sci. Rep. 2, e756.

    Article  PubMed  PubMed Central  Google Scholar 

  9. Levina A.S., Repkova M.N., Mazurkova N.A., Makarevich E.V., Ismagilov Z.R., Zarytova V.F. 2015. Knockdown of different influenza A virus subtypes by a single antisense oligodeoxyribonucleotide. Int. J. Antimicrob. Agents. 46, 125–128.

    Article  CAS  PubMed  Google Scholar 

  10. Levina A.S., Repkova M.N., Bessudnova E.V., Filippova E.I., Mazurkova N.A., Zarytova V.F. 2016. High antiviral effect of TiO2·PL-DNA nanocomposites targeted to conservative regions of (–)RNA and (+)RNA of influenza A virus in cell culture. Beilstein J. Nanotechnol. 7, 1166–1173.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Stetsenko D.A., Kupryushkin M.S., Pyshnyi D.V. 2014. Patent Application WO2016/028187 A1. Priority from August 22, 2014.

    Google Scholar 

  12. Kitamura M., Yano M., Tashiro N., Miyagawa S., Sando M., Okauchi T. 2011. Direct synthesis of organic azides from primary amines with 2-azido-1,3-dimethylimidazolinium hexafluorophosphate. Eur. J. Org. Chem. 3, 458–462. doi 10.1002/ejoc.201001509

    Article  Google Scholar 

  13. Levina A.S., Mikhalieva E.A., Repkova M.N., Zarytova V.F. 2008. Synthesis of polyamine-containing oligonucleotides. Russ. J. Bioorg. Chem. 34, 89–95.

    Article  CAS  Google Scholar 

  14. Virology: A Practical Approach. Mahy B.W.J., Ed., Oxford: IRL, 1985; Moscow: Mir, 1988.

  15. Zaks L. 1976. Statisticheskoe otsenivanie (Statistical Evaluation). Moscow: Statistika.

    Google Scholar 

  16. Portela A., Digard P. 2002. The influenza virus nucleoprotein: A multifunctional RNA-binding protein pivotal to virus replication. J. Gen. Virol. 83, 723–734.

    Article  CAS  PubMed  Google Scholar 

  17. Kupryushkin M.S., Pyshnyi D.V., Stetsenko D.A. 2014. Phosphoryl Guanidines: A new type of nucleic acid analogues. Acta Naturae. 6, 123–125.

    Google Scholar 

  18. Furuse Y., Oshitani H. 2011. Evolution of the influenza A virus untranslated regions. Infect. Genet. Evol. 11, 1150–1154.

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to V. F. Zarytova.

Additional information

Original Russian Text © A.S. Levina, M.N. Repkova, B.P. Chelobanov, E.V. Bessudnova, N.A. Mazurkova, D.A. Stetsenko, V.F. Zarytova, 2017, published in Molekulyarnaya Biologiya, 2017, Vol. 51, No. 4, pp. 717–723.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Levina, A.S., Repkova, M.N., Chelobanov, B.P. et al. Impact of delivery method on antiviral activity of phosphodiester, phosphorothioate, and phosphoryl guanidine oligonucleotides in MDCK cells infected with H5N1 bird flu virus. Mol Biol 51, 633–638 (2017). https://doi.org/10.1134/S0026893317040136

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1134/S0026893317040136

Keywords

Navigation