The pyradi radiometry toolkit

The pyradi toolkit is designed to simplify many common, repetitive calculations researchers must perform while modeling electro-optical systems.
12 December 2012
Cornelius Willers, Johannes Calitz, Alta de Waal, Azwitamisi Mudau, Maria Willers, Pieter van der Merwe and Ricardo Tavares Santos

Modeling and designing in electro-optical systems entails the calculation of several (often interrelated) parameters. Many of these calculations are repetitive, suitable for including in a generic toolkit. A well-designed kit would facilitate work flow and increase productivity during the modeling and design process. The concept of an extendable toolkit lends itself naturally to the open-source philosophy, where users cooperatively develop new tools to add to an ever-expanding set for the mutual benefit of all. The pyradi toolkit is an extendable, integrated and coherent collection of basic functions that can be applied towards diverse calculations in the electro-optics domain.1 The name pyradi is derived from the combination of ‘Python’ and ‘Radiometry.’

We initially considered two candidate languages for pyradi, MATLAB and Python. MATLAB has a strong following in the scientific community. In recent years Python and associated modules have been well tested, and have stabilized and matured sufficiently to support mainstream tool development. But after extensive use of both languages for radiometric calculation and modeling, we decided to continue only with Python. With this application and its features in mind, Python provides better capability as a general purpose language, and its data visualization tools, Matplotlib and Mayavi, are the most powerful available today. While the wider range of toolboxes (including Simulink) might be a compelling reason to use MATLAB, those capabilities are not required here.


Figure 1. Example polar plots: note axes conventions and yellow/red highlight of negative values.

We have already designed a number of pyradi modules covering basic electro-optical system calculations. For instance, the ryplanck module provides functions for Planck Law emittance calculations, as well as the Planck Law temperature derivative functions. Given the temperature and spectral vector, the functions provide spectral emittance in W/(m2·*) or q/(s·m2·*), with spectral variable * in wavelength, wavenumbers and frequency units. The ryfiles module provides functions for file input/output. Functions are provided to save a two-dimensional array to a text file, load selected columns of data from a text file, load a column header line, and read and write raw binary files. Matplotlib functions for Cartesian plots, polar plots (see Figure 1), three-dimensional plots (Figure 2) and image display (Figure 3) are wrapped by the ryplot module, which handles negative values in polar plots so as not to confuse negative values with a 180° phase shift. We included various utility functions for radiometry calculations in the ryutils module. Modeling a maximally flat spectral filter or a simple photon detector spectral response (see Figure 4), effective value calculation, spectral convolution, and conversion between spectral domain variables can all be handled by ryutils. The ryptw module provides the capability to read FLIR Inc.'s *.ptw (Cedip) files, used for thermal imaging data. All information in the file header is read and made available with the image frames. Calculating three-dimensional noise parameters in an image sequence can be done with the ry3dnoise module (see Figure 3). The rydetector module provides a bulk material detector model for substances such as silicon, germanium, or indium antimonide, based on academic and well known parameters and models found in the classical literature. We also included functionality to read atmospheric spectral data from Modtran tape7 files given the column header names with the rymodtran module (see Figure 5). All four variations of the atmospheric scattering mode (IEMSCT) are accounted for, hence all formats of tape7 files can be read. And the ryplotspherical module provides the capability to do three-dimensional spherical plots of target signatures or color ratios (Figure 2).


Figure 2. Three-dimensional spherical plots of signature color ratios.

Figure 3. 3-D noise calculation on measured medium-wave infrared (MWIR) images. The N values refer to spatial and temporal noise measurements along columns (h) and rows (v) in the video sequence. A single frame of the video is shown in the figure.

Figure 4. Example of detector spectral shapes. The parameters 'a' and 'n' have no physical meaning.

Figure 5. Atmospheric data recorded using Modtran, read and plotted with pyradi. Abbreviations in the legend box represent standard Modtran tape7 labels for atmospheric data.

We manage the pyradi code in accordance with general practice in the open source community, and we make it available under the terms of the Mozilla Public License 1.1. The code is available on Google Code.2 The toolkit files can be downloaded one-by-one using a web browser. We recommend, however, that a subversion client be used to check out and commit changes to the existing code or to add new features (instructions are given on the website).

The pyradi documentation is available using a link from the pyradi website.2 Documentation is extracted from the comments in the Python code files, using the Sphinx documentation generator. At the moment there is no user guide, but complete commented example code is included at the end of each module file.

The pyradi toolkit provides researchers and academia with a set of tools to simplify complex radiometry calculations and data visualization. We plan to grow the toolkit from its current modest beginning with the addition of new functionality in the future. Users are encouraged to join in, use, and contribute!


Cornelius Willers, Johannes Calitz, Alta de Waal, Azwitamisi Mudau
Council for Scientific and Industrial Research (CSIR)
Pretoria, South Africa

Cornelius Willers served as technical lead in a program to establish imaging seeker technology at Denel Dynamics until 2004. More recently, he worked on missile countermeasure development at the CSIR. He is codeveloper of a major physics-based infrared simulation system, and currently teaches a course in radiometry at the University of Pretoria.

Maria Willers, Pieter van der Merwe
Denel Dynamics
Pretoria, South Africa
Ricardo Tavares Santos
Instituto Tecnológico de Aeronáutica
São José Dos Campos, Brazil

References:
1. C. J. Willers, M. S. Willers, R. A. T. Santos, P. J. van der Merwe, J. J. Calitz, A. de Waal, A. E. Mudau, Pyradi: an open-source toolkit for infrared calculation and data processing, Proc. SPIE 8543, 2012. doi:10.1117/12.976043
2. http://code.google.com/p/pyradi Pyradi Python toolkit. Accessed 19 November, 2012.
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