Thymic Selection of T-Cell Receptors as an Extreme Value Problem

Andrej Košmrlj, Arup K. Chakraborty, Mehran Kardar, and Eugene I. Shakhnovich
Phys. Rev. Lett. 103, 068103 – Published 7 August 2009

Abstract

T lymphocytes (T cells) orchestrate adaptive immune responses upon activation. T-cell activation requires sufficiently strong binding of T-cell receptors on their surface to short peptides (p) derived from foreign proteins, which are bound to major histocompatibility gene products (displayed on antigen-presenting cells). A diverse and self-tolerant T-cell repertoire is selected in the thymus. We map thymic selection processes to an extreme value problem and provide an analytic expression for the amino acid compositions of selected T-cell receptors (which enable its recognition functions).

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  • Received 30 March 2009

DOI:https://doi.org/10.1103/PhysRevLett.103.068103

©2009 American Physical Society

Authors & Affiliations

Andrej Košmrlj1, Arup K. Chakraborty2, Mehran Kardar1, and Eugene I. Shakhnovich3

  • 1Department of Physics, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
  • 2Departments of Chemical Engineering, Chemistry and Biological Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
  • 3Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138, USA

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Issue

Vol. 103, Iss. 6 — 7 August 2009

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