Model for amorphous aggregation processes

Samuel D. Stranks, Heath Ecroyd, Steven Van Sluyter, Elizabeth J. Waters, John A. Carver, and Lorenz von Smekal
Phys. Rev. E 80, 051907 – Published 9 November 2009

Abstract

The amorphous aggregation of proteins is associated with many phenomena, ranging from the formation of protein wine haze to the development of cataract in the eye lens and the precipitation of recombinant proteins during their expression and purification. While much literature exists describing models for linear protein aggregation, such as amyloid fibril formation, there are few reports of models which address amorphous aggregation. Here, we propose a model to describe the amorphous aggregation of proteins which is also more widely applicable to other situations where a similar process occurs, such as in the formation of colloids and nanoclusters. As first applications of the model, we have tested it against experimental turbidimetry data of three proteins relevant to the wine industry and biochemistry, namely, thaumatin, a thaumatinlike protein, and α-lactalbumin. The model is very robust and describes amorphous experimental data to a high degree of accuracy. Details about the aggregation process, such as shape parameters of the aggregates and rate constants, can also be extracted.

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  • Received 23 January 2009

DOI:https://doi.org/10.1103/PhysRevE.80.051907

©2009 American Physical Society

Authors & Affiliations

Samuel D. Stranks1,2, Heath Ecroyd1,*, Steven Van Sluyter2,3, Elizabeth J. Waters2, John A. Carver1, and Lorenz von Smekal1,4,†

  • 1School of Chemistry and Physics, The University of Adelaide, South Australia 5005, Australia
  • 2The Australian Wine Research Institute, P.O. Box 197, Glen Osmond, South Australia 5064, Australia
  • 3School of Botany, The University of Melbourne, Victoria 3010, Australia
  • 4Institut für Kernphysik, Technische Universität Darmstadt, Schlossgartenstr. 9, 64289 Darmstadt, Germany

  • *Present address: School of Biological Sciences, University of Wollongong, Wollongong, NSW 2522, Australia.
  • Corresponding author; lorenz.smekal@physik.tu-darmstadt.de

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Vol. 80, Iss. 5 — November 2009

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