Pattern formation in a four-ring reaction-diffusion network with heterogeneity

Ian Hunter, Michael M. Norton, Bolun Chen, Chris Simonetti, Maria Eleni Moustaka, Jonathan Touboul, and Seth Fraden
Phys. Rev. E 105, 024310 – Published 22 February 2022
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Abstract

In networks of nonlinear oscillators, symmetries place hard constraints on the system that can be exploited to predict universal dynamical features and steady states, providing a rare generic organizing principle for far-from-equilibrium systems. However, the robustness of this class of theories to symmetry-disrupting imperfections is untested in free-running (i.e., non-computer-controlled) systems. Here, we develop a model experimental reaction-diffusion network of chemical oscillators to test applications of the theory of dynamical systems with symmeries in the context of self-organizing systems relevant to biology and soft robotics. The network is a ring of four microreactors containing the oscillatory Belousov-Zhabotinsky reaction coupled to nearest neighbors via diffusion. Assuming homogeneity across the oscillators, theory predicts four categories of stable spatiotemporal phase-locked periodic states and four categories of invariant manifolds that guide and structure transitions between phase-locked states. In our experiments, we observed that three of the four phase-locked states were displaced from their idealized positions and, in the ensemble of measurements, appeared as clusters of different shapes and sizes, and that one of the predicted states was absent. We also observed the predicted symmetry-derived synchronous clustered transients that occur when the dynamical trajectories coincide with invariant manifolds. Quantitative agreement between experiment and numerical simulations is found by accounting for the small amount of experimentally determined heterogeneity in intrinsic frequency. We further elucidate how different patterns of heterogeneity impact each attractor differently through a bifurcation analysis. We show that examining bifurcations along invariant manifolds provides a general framework for developing intuition about how chemical-specific dynamics interact with topology in the presence of heterogeneity that can be applied to other oscillators in other topologies.

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  • Received 19 January 2021
  • Revised 8 June 2021
  • Accepted 28 January 2022

DOI:https://doi.org/10.1103/PhysRevE.105.024310

©2022 American Physical Society

Physics Subject Headings (PhySH)

Nonlinear DynamicsInterdisciplinary PhysicsNetworks

Authors & Affiliations

Ian Hunter1,*, Michael M. Norton2,*, Bolun Chen3,4, Chris Simonetti1, Maria Eleni Moustaka1, Jonathan Touboul3,5, and Seth Fraden1,†

  • 1Brandeis University Physics, Waltham, Massachusetts 02453, USA
  • 2Center for Neural Engineering, Department of Engineering Science and Mechanics, The Pennsylvania State University, University Park, Pennsylvania 16802, USA
  • 3Volen National Center for Complex Systems, Brandeis University, Waltham, Massachusetts 02453, USA
  • 4Department of Physics, Boston University, Boston Massachusetts 02215, USA
  • 5Brandeis University Mathematics Department, Waltham, Massachusetts 02453, USA

  • *These authors contributed equally to this work.
  • Corresponding author: fraden@brandeis.edu

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Issue

Vol. 105, Iss. 2 — February 2022

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