Dynamics of fluid bilayer vesicles: Soft meshes and robust curvature energy discretization

Ali Farnudi, Mohammad Reza Ejtehadi, and Ralf Everaers
Phys. Rev. E 108, 015301 – Published 10 July 2023

Abstract

Continuum models like the Helfrich Hamiltonian are widely used to describe fluid bilayer vesicles. Here we study the molecular dynamics compatible dynamics of the vertices of two-dimensional meshes representing the bilayer, whose in-plane motion is only weakly constrained. We show (i) that Jülicher's discretization of the curvature energy offers vastly superior robustness for soft meshes compared to the commonly employed expression by Gommper and Kroll and (ii) that for sufficiently soft meshes, the typical behavior of fluid bilayer vesicles can emerge even if the mesh connectivity remains fixed throughout the simulations. In particular, soft meshes can accommodate large shape transformations, and the model can generate the typical 4 signal for the amplitude of surface undulation modes of nearly spherical vesicles all the way up to the longest wavelength modes. Furthermore, we compare results for Newtonian, Langevin, and Brownian dynamics simulations of the mesh vertices to demonstrate that the internal friction of the membrane model is negligible, making it suitable for studying the internal dynamics of vesicles via coupling to hydrodynamic solvers or particle-based solvent models.

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  • Received 30 August 2022
  • Revised 4 April 2023
  • Accepted 26 May 2023

DOI:https://doi.org/10.1103/PhysRevE.108.015301

©2023 American Physical Society

Physics Subject Headings (PhySH)

Physics of Living SystemsStatistical Physics & ThermodynamicsCondensed Matter, Materials & Applied Physics

Authors & Affiliations

Ali Farnudi* and Mohammad Reza Ejtehadi

  • Department of Physics, Sharif University of Technology, P.O. Box 11155-9161, Tehran, Iran

Ralf Everaers

  • Ecole Normale Supérieure (ENS) de Lyon, CNRS, Laboratoire de Physique and Centre Blaise Pascal de l'ENS de Lyon, F-69342 Lyon, France

  • *ali.farnudi@ens-lyon.fr

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Issue

Vol. 108, Iss. 1 — July 2023

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