Multicanonical Chain-Growth Algorithm

Michael Bachmann and Wolfhard Janke
Phys. Rev. Lett. 91, 208105 – Published 14 November 2003

Abstract

We present a temperature-independent Monte Carlo method for the determination of the density of states of lattice proteins that combines the fast ground-state search strategy of the new pruned-enriched Rosenbluth chain-growth method and multicanonical reweighting for sampling the complete energy space. Since the density of states contains all energetic information of a statistical system, we can directly calculate the mean energy, specific heat, Helmholtz free energy, and entropy for all temperatures. We apply this method to lattice proteins consisting of hydrophobic and polar monomers, and for the examples of sequences considered, we identify the transitions between native, globule, and random coil states. Since no special properties of heteropolymers are involved in this algorithm, the method applies to polymer models as well.

  • Figure
  • Figure
  • Figure
  • Figure
  • Received 27 April 2003

DOI:https://doi.org/10.1103/PhysRevLett.91.208105

©2003 American Physical Society

Authors & Affiliations

Michael Bachmann* and Wolfhard Janke

  • Institut für Theoretische Physik, Universität Leipzig, Augustusplatz 10/11, D-04109 Leipzig, Germany

  • *Email address: michael.bachmann@itp.uni-leipzig.de
  • Electronic addresses: wolfhard.janke@itp.uni-leipzig.de; http://www.physik.uni-leipzig.de/CQT

Article Text (Subscription Required)

Click to Expand

References (Subscription Required)

Click to Expand
Issue

Vol. 91, Iss. 20 — 14 November 2003

Reuse & Permissions
Access Options
Author publication services for translation and copyediting assistance advertisement

Authorization Required


×
×

Images

×

Sign up to receive regular email alerts from Physical Review Letters

Log In

Cancel
×

Search


Article Lookup

Paste a citation or DOI

Enter a citation
×