Feasibility of Genome-Scale Construction of Promoter::Reporter Gene Fusions for Expression in Caenorhabditis elegans Using a MultiSite Gateway Recombination System

  1. Ian A. Hope1,5,
  2. Jonathan Stevens1,
  3. Anna Garner1,
  4. Josie Hayes1,
  5. David L. Cheo2,4,
  6. Michael A. Brasch2,4, and
  7. Marc Vidal3
  1. 1 School of Biology, University of Leeds, Leeds, LS2 9JT, United Kingdom
  2. 2 Invitrogen Corporation, Carlsbad, California 92008, USA
  3. 3 Dana-Farber Cancer Institute and Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA

Abstract

The understanding of gene function increasingly requires the characterization of DNA segments containing promoters and their associated regulatory sequences. We describe a novel approach for linking multiple DNA segments, here applied to the generation of promoter::reporter fusions. Promoters from Caenorhabditis elegans genes were cloned using the MultiSite Gateway cloning technology. The capacity for using this system for efficient construction of chimeric genes was explored by constructing promoter::reporter gene fusions with a gfp reporter. The promoters were found to provide appropriate expression of GFP upon introduction into C. elegans, demonstrating that the short Gateway recombination site between the promoter and the reporter did not interfere with transcription or translation. The recombinational cloning involved in the Gateway system, which permits the highly efficient and precise transfer of DNA segments between plasmid vectors, makes this technology ideal for genomics research programs.

Footnotes

  • [Supplemental material is available online at www.genome.org.]

  • Article and publication are at http://www.genome.org/cgi/doi/10.1101/gr.2463804.

  • 5 Corresponding author. E-MAIL i.a.hope{at}leeds.ac.uk; FAX 0113 343 2835.

  • 4 Present address: Atto Bioscience, Rockville, MD, USA.

    • Accepted June 10, 2004.
    • Received February 15, 2004.
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