Abstract
Summary YAMB is a novel metagenome binning tool, which uses tetranucletotide composition and average contig coverage and performs t-SNE dimensionality reduction and sequential DBSCAN data clusterization. YAMB provided with metagenomics assembly and reads may be used for straightforward metagenome binning on a recent personal computer running Linux OS.
Availability and Implementation Source code of YAMB is freely available on GitHub (https://github.com/laxeye/YAMB), implemented in R, Perl and Bash and supported on Linux.
Contact Korzhenkov_AA{at}nrcki.ru
Copyright
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.