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Analyzing somaclonal variation in micropropagated bananas (Musa spp.)

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Summary

In a micropropagation program, where it is of paramount importance to produce true-to-type planting material, somaclonal variation of any kind is undesirable. Variation among plants regenerated from tissue culture is termed ‘somaclonal variation’. In banana, somaclonal variants of different type have been reported with regard to plant morphology. This article discusses various factors due to which somaclonal variations may arise. Somaclonal variation may be detected by visual screening or by using molecular markers such as randomly amplified polymorphic DNA (RAPD), amplified fragment length polymorphism (AFLP), and by cytological studies. Although somaclonal variation is undesirable in the context of micropropagation, it can be used to advantage for genetic improvement of banana, as has been described.

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References

  • Bhojwani, S. S.; Razdan, M. K. Cytogenetic studies. In: Bhojwani, S. S.; Razdan, M. K., eds. Plant tissue culture: theory and practice. Developments in crop science, vol. 5. Amsterdam: Elsevier Science Publishers B.V.; 1983:159–180.

    Google Scholar 

  • Chadha, K. L.; Sahijram, L. Application of biotechnology to Musa. In: Chadha, K. L.; Ravindran, P. N.; Sahijram, L. eds. Biotechnology in horticultural and plantain crops. New Delhi: Malhotra Publishing House; 2000:232–247.

    Google Scholar 

  • Cote, F. X.; Sandovel, J. A.; Marie, P. H.; Auboiron, E. Variation in micropropagated bananas and plantains: literature survey. Fruits 48:15–22; 1993.

    Google Scholar 

  • Damasco, O. P. Molecular methods for early identification of banana (Musa spp., AAA) dwarf somaclonal variants. Philippine Tech. J. 22:29–39; 1997.

    Google Scholar 

  • Damasco, O. P.; Smith, M. K.; Godwin, I. D.; Adkins, S. W.; Smillic, R. M.; Hatherington, S. E. Micropropagated dwarf off-type ‘Cavendish’ bananas (Musa spp., AAA) show improved tolerance to subtropical temperatures. Australian J. Agri. Res. 48:377–384; 1997.

    Article  Google Scholar 

  • Duncan, R. R. Tissue culture-induced variation and crop improvement. Adv. Agron. 58:201–240; 1997.

    Article  CAS  Google Scholar 

  • El-tarras, A. E.; Taha, F. A.; Abd-el-Wahab, S. Somaclonal variation in micropropagated banana at biochemical and chromosomal levels. Bull. Fac. Agriculture, Univ. of Cairo 46:429–440; 1995.

    Google Scholar 

  • Engelborghs, I.; Swennen, B.; Campenhout, S. V. The potential of AFLP to detect genetic differences and somaclonal variants in Musa spp. Infomusa 7(2):3–6; 1998.

    Google Scholar 

  • Evans, D. A.; Sharp, W. R.; Medina-Filho, H. P., Somaclonal and gametoclonal variation. Am. J. Bot. 71:759–774; 1984.

    Article  Google Scholar 

  • Grillo, G. S.; Martin, M. J. G.; Dominguez, A. M. Morphological methods for the detection of banana off-types during the hardening phase. Int. Soc. Hort. Sci. 490:239–245; 1998.

    Google Scholar 

  • Hammerschlag, F. A. Somaclonal variation. In: Hammerschlag, F. A.; Litz, R. E., eds. Biotechnology of perennial fruits. Wallingford: CAB International; 1992:35–55.

    Google Scholar 

  • Herman, E. B. Recent advances in plant tissue culture. Regeneration, micropropagation and media 1988–1991. Ethylene, DNA methylation and regeneration. New York: Agritech Consultants, Shrub Oak; 1991:6–10.

    Google Scholar 

  • Hwang, S. Variation in banana plants propagated through tissue culture. J. Chinese Soc. Hort. Sci. 32:1986 (in Chinese with English summary).

  • Hwang, S. Somaclonal variational approach to breeding Cavendish banana for resistance to Fusarium wilt race 4. Global Conf. on Banana and Plantain, October 28–31, Bangalore, India. Abstracts: 2002:57

  • Hwang, S.; Tang, C. Y. Somaclonal variation and its use for improving Cavendish (AAA dessert) bananas in Taiwan. In: Frison, E. A.; Horry, J. P.; deWaele, D., eds. New frontiers in resistance breeding for nematode, Fusarium and Sigatoka. Kuala Lumpuro 1996:173–181.

  • Hwang, S.; Tang, C. Y. Improved resistance to Fusarium wilt through somaclonal variation in Cavendish bananas. In: Proc. Conf. on Challenges for Banana Production and Utilization in 21st Century, September 24–25, 1996. Trichy, India: Association for Improvement in Production and Utilization of Banana (AIPUB): 2000:195–208.

    Google Scholar 

  • Israeli, Y.; Ben-Bassat, D.; Reuveni, O. Selection of stable banana clones which do not produce dwarf somaclonal variants during in vitro culture. Sci. Hort. 67:197–205; 1996.

    Article  Google Scholar 

  • Israeli, Y.; Reuveni, O.; Lahav, E. Qualitative aspects ofsomaclonal variations in banana propagated by in vitro techniques. Sci. Hort. 48:71–88; 1991.

    Article  Google Scholar 

  • Jambhale, N. D.; Patil, S. C.; Jadhav, A. S.; Pawar, S. V.; Waghmode, B. D. Effect of number of subcultures on in vitro multiplication of four banana clones. Infomusa 10(1):38–39; 2001.

    Google Scholar 

  • Kalloo, G. Banana and plantation research in India—a perspective. Global Conf. on Banana and Plantain, October 28–31, Bangalore, India. Abstract; 2002:5–6.

  • Krikorian, A. D.; Irizarry, H.; Cronauer-Mitra, S.; Rivera, E. Clonal fidelity and variation in plantain (Musa AAB) regenerated from vegetative stem and floral axis tips in vitro. Ann. Bot. 71:519–535; 1993.

    Article  Google Scholar 

  • Larkin, P. J.; Scowcroft, W. R. Somaclonal variation—a novel source of variability from cell cultures for plant improvement. Theor. Appl. Genet. 60:197–214; 1981.

    Article  Google Scholar 

  • Lindsey, K.; Jones, M. Biotechnologia vegetal agricola. Zaragoza: Editorial Acribia S. A.; 1989.

    Google Scholar 

  • Lo Schiavo, F.; Pitto, L.; Giuliano, G.; Nuti-Ronchi, V.; Marazziti, D.; Vergera, R.; Orselli, S.; Terzi, M. DNA methylation of embryogenic carrot cell cultures and its variations as caused by mutation, differentiation, hormones and hypomethylating drugs. Theor. Appl. Genet. 77:325–331; 1989.

    Article  Google Scholar 

  • Lopez, J. Genetic improvement of Musa spp. by in vitro mutational plant breeding. Report of the first FAO/IAEA research co-ordination meeting on cellular biology and biotechnology including mutations techniques for creation of new useful banana genotypes. Vienna: FAO/IAEA; 1995:20–24.

    Google Scholar 

  • Lorz, H.; Gobel, E.; Brown, P. Advances in tissue culture and progress towards genetic transformation of cereals. Plant Breed. 100:1–25; 1988.

    Article  Google Scholar 

  • Martin, M. J. G.; Grillo, G. S.; Dominguez, A. M. The use of randomly amplified polymorphic DNA (RAPD) for the study of genetic diversity and somaclonal variation in Musa. Int. Soc. Hort. Sci. 490:445–454; 1998.

    Google Scholar 

  • Martinez, O.; Reyes, L. M.; Beltran, M. Chemovariability in the genus Musa: similarities and differences. Infomusa 7(2):16–20; 1998.

    Google Scholar 

  • Monette, P. L. Grapevine (Vitis vinifera L.). In: Bajaj, Y. P. S., ed. Biotechnology in agriculture and forestry, vol. 6. Berlin: Springer-Verlag; 1988:3–37.

    Google Scholar 

  • Munksgaard, D.; Mattsson, O.; Okkele, F. T. Somatic embryo development in carrot is associated with an increase in levels of S-adenosylmethionine, S-adenosylhomocysteine and DNA methylation. Physiol. Plant. 93:5–10; 1995.

    Article  CAS  Google Scholar 

  • Okkels, F. T. A theory explaining formation of somatic embryogenic cells by auxin induced inhibition of DNA methylation. Physiol. Plant. 73:11A; 1988.

    Google Scholar 

  • Pancholi, N. C.; Wetten, A.; Caligari, P. D. S. Detection of levels of somaclonal variation in Musa using molecular markers. Meeting on tropical plants. 11–15 March, Montpellier; 1996:2 pp.

  • Patil, P. V.; Navale, P. A. Somaclonal variation in fruit crops: a review. J. Maharashtra Agric. Univ. 25(1):8–14; 2000.

    Google Scholar 

  • Peschke, V. M.; Phillips, R. L. Genetic implications of somaclonal variation in plants. Adv. Genet. 30:41–75; 1992.

    Article  CAS  Google Scholar 

  • Phillips, R. L.; Kaeppler, S. M.; Peschke, V. M. Do we understand somaclonal variation? In: Nijkamp, H. J. J.; van der Plas, L. H. W.; van Aartrijk, J., eds. Proc. 7th Int. Congress Plant Tissue Cell Culture. Dordrecht: Kluwer: 1990:131–141.

    Google Scholar 

  • Rodrigues, P. H. V.; Tulmann Neto, A.; Cassieri Neto, P.; Mendes, B. M. J. Influence of the number of subcultures on somaclonal variation in micropropagated Nanico (Musa spp., AAA group). Acta Hort. 490:469–473; 1998.

    Google Scholar 

  • Samuel, J. C.; Singh, H. P. Developmental efforts for promoting microirrigation in banana. Global Conf. on Banana and Plantain. October 28–31, Bangalore, India. Abstracts: 2002:231.

  • Sandoval, J.; Kerbellec, F.; Cote, F.; Doumas, P. Distribution of endogenous gibberellins in dwarf and giant off-type banana (Musa AAA, ev. ‘Grand Naine’) plants from in vitro propagation. Plant Growth Reg. 17:219–224; 1995.

    Article  CAS  Google Scholar 

  • Shchukin, A.; Ben-Bassat, D.; Israeli, Y. Plant regeneration via somatic embryogenesis in Grand Naine banana and its effect on somaclonal variation. Acta Hort. 447:317–318; 1997.

    Google Scholar 

  • Shchukin, A.; Ben-Bassat, D.; Israeli, Y. Somaclonal variation and horticultural performance of ‘Grand Naine’ bananas multiplied via somatic embryogenesis or shoot-tip culture. In: Plant biotechnology and in vitro biology in the 21st century. Jerusalem: International Association for Plant Tissue Culture. Abstracts; 1998:14–19.

    Google Scholar 

  • Shepherd, K.; Souza, F. V. D.; Da Silva, K. M. Mitotic instability in banana varieties. IV. BAP concentration and effects of number of subcultures. Fruits 51:211–216; 1996.

    Google Scholar 

  • Singh, H. P. Indian bananas—issues and strategies. Global Conf. on Banana and Plantain, October 28–31, Bangalore, India. Abstracts; 2002:1–2.

  • Skirvin, R. M.; McPheeters, K. D.; Norton, M. Sources and frequency of somaclonal variation. HortScience 29:1232–1237; 1994.

    Google Scholar 

  • Smith, M. K. A review of factors influencing the genetic stability of micropropagated bananas. Fruits 43:219–223; 1988.

    Google Scholar 

  • Smith, M. K.; Hamill, S. D.; Doogan, V. J.; Daniells, J. W. Characterisation and early detection of an off-type from micropropagated ‘Lady Finger’ bananas. Australian J. Exp. Agri. 39:1017–1023; 1999.

    Article  Google Scholar 

  • Stover, R. H. Somaclonal variation in Grand Naine and Saba banana in nursery and field. ACIAR Proc. Series, Australian Center for Intl. Agric. Res. 21:136–139; 1987.

    Google Scholar 

  • Sunderland, N. Nuclear cytology. In: Street, H. E., ed. Plant tissue and cell culture. Oxford: Blackwell Scientific Publishers; 1977:177–205.

    Google Scholar 

  • Tang, C. Y.; Liu, C. C.; Hwang, S. C. Improvement of the horticultural traits of Cavendish banana (Musa spp., AAA group I). Selection and evaluation of a semi-dwarf clone resistant to Fusarium wilt. J. Chinese Soc. Hort. Sci. 46:173–182; 2000.

    Google Scholar 

  • Teisson, C.; De Langhe, E. Biotechnologies for banana and plantain. In: Baylis, E., ed. Plant biotechnologies for developing countries, UK: The Trinity Press; 1989:241–243.

    Google Scholar 

  • Thomas, J.; Cullis, M. A.; Kunert, K.; Engelborghs, I.; Swennen, R.; Cullis, C. A. DNA markers for the detection of genomic integrity. In: 3rd Int. Symp. on Molecular and Cellular Biology of Banana, September 9–11, Leuven, Belgium. Abstracts: 2002:18.

  • Trujillo, I.; Garcia, E. Strategies for obtaining somaclonal variants resistant to yellow Sigatoka (Mycosphaerella musicola). Infomusa 5(2):12–13; 1996.

    Google Scholar 

  • Uma, S.; Selvarajan, R.; Saraswathi, M. S.; Rameshkumar, A.; Sathiamoorthy, S. Production of quality planting material in banana. Global Conf. on Banana and Plantain, October 29–31, Bangalore, India. Souvenir; 2002:24–30.

  • Ventura, J.; De, L. C.; Rojas, M. E.; Year, E. C.; Lopez, J.; Rodriguez, N. A. A. Somaclonal variation in micropropagated bananas (Musa spp.). Technical en la Agricultur Viandas 11(1):7–16; 1988.

    Google Scholar 

  • Vidhya, R.; Ashalatha, S. N. In-vitro culture, pseudostem pigmentation and genetic characterization of Musa acuminata cv. Red. Global Conf. on Banana and Plantain, October 28–31, Bangalore, India. Abstracts; 2002:65.

  • Watson, J. D.; Gilman, M.; Witkowsk, J.; Zoller, M. eds. Recombinant DNA. New York: Scientific American Books; 1992:274.

    Google Scholar 

  • Xic, Q. J.; Rush, M. C.; Oard, J. H. Homozygous variation in rice somaclones: nonrandom variation instead of mitotic recombination. Crop Sci. 35:954–957; 1995.

    Article  Google Scholar 

  • Zaffari, G. R.; Peres, L. E. P.; Kerbany, G. B. Endogenous levels of cytokinins, indoleacetic acid, abscisic acid and pigments in varicgated somaclones of micropropagated banana leaves. J. Plant Growth Reg. 17(2):59–61; 1998.

    Article  CAS  Google Scholar 

  • Zhenxun, W.; Hongxian, L. Chromosome aberration in banana micropropagation. Acta Genet. Sin. 24:550–560; 1997.

    Google Scholar 

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Correspondence to Leela Sahijram.

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Sahijram, L., Soneji, J.R. & Bollamma, K.T. Analyzing somaclonal variation in micropropagated bananas (Musa spp.). In Vitro Cell Dev Biol -Plant 39, 551–556 (2003). https://doi.org/10.1079/IVP2003467

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