Methods Inf Med 2004; 43(04): 391-397
DOI: 10.1055/s-0038-1633882
Original Article
Schattauer GmbH

Atlas-based Recognition of Anatomical Structures and Landmarks and the Automatic Computation of Orthopedic Parameters

J. Ehrhardt
1   Institute for Medical Informatics, University of Lübeck, Lübeck, Germany
,
H. Handels
1   Institute for Medical Informatics, University of Lübeck, Lübeck, Germany
2   Institute of Medical Informatics, University Hospital Hamburg-Eppendorf, Hamburg, Germany
,
W. Plötz
3   Department of Orthopedic Surgery, Krankenhaus der Barmherzigen Brüder, München, Germany
,
S. J. Pöppl
1   Institute for Medical Informatics, University of Lübeck, Lübeck, Germany
› Author Affiliations
Further Information

Publication History

Publication Date:
05 February 2018 (online)

Summary

Objective: This paper describes methods for the automatic atlas-based segmentation of bone structures of the hip, the automatic detection of anatomical point landmarks and the computation of orthopedic parameters to avoid the interactive, time-consuming preprocessing steps for the virtual planning of hip operations.

Methods: Based on the CT data of the Visible Human Data Sets, two three-dimensional atlases of the human pelvis have been built. The atlases consist of labeled CT data sets, 3D surface models of the separated structures and associated anatomical point landmarks. The atlas information is transferred to the patient data by a non-linear gray value-based registration algorithm. A surface-based registration algorithm was developed to detect the anatomical landmarks on the patient’s bone structures. Furthermore, a software tool for the automatic computation of orthopedic parameters is presented. Finally, methods for an evaluation of the atlas-based segmentation and the atlas-based landmark detection are explained.

Results: A first evaluation of the presented atlas-based segmentation method shows the correct labeling of 98.5% of the bony voxels. The presented landmark detection algorithm enables the precise and reliable localization of orthopedic landmarks. The accuracy of the landmark detection is below 2.5 mm.

Conclusion: The atlas-based segmentation of bone structures, the atlas-based landmark detection and the automatic computation of orthopedic measures are suitable to essentially reduce the time-consuming user interaction during the pre-processing of the CT data for the virtual three-dimensional planning of hip operations.

 
  • References

  • 1 Moody JE, DiGioia AM, Jaramaz B, Blackwell M, Colgan B, Nikou C. Gauging clinical practice: surgical navigation for Total Hip Replacement. In Wells WM, Colchester A, Delp S. (eds) MICCAI 98. Medical Image Computing and Computer-Assisted Intervention. 1998: 421-30.
  • 2 Langlotz U, Lawrence J, Hu Q, Langlotz F, Nolte L-P. Image guided cup placement. In Lemke HU, Vannier MW, Inamura K, Farman AG. (eds) CARS 99. Computer Assisted Radiology and Surgery. 1999: 717-21.
  • 3 Harris SJ, Lin WJ, Fan KL, Hibberd RD, Cobb J, Middleton R, Davies BL. Experiences with robotic systems for knee surgery. In: Proceedings of the First Joint Conference of CVRMed and MRCAS. 1997; 757-66.
  • 4 Richolt JA, Teschner M, Everett PC, Girod B, Millis MB, Kikinis R. Planning and evaluation of reorienting osteotomies of the proximal femur in cases of SCFE using virtual three-dimensional models. In Wells WM, Colchester A, Delp S. (eds) MICCAI 98. Medical Image Computing and Computer-Assisted Intervention. 1998
  • 5 Handels H, Ehrhardt J, Plötz W, Pöppl SJ. Virtual planning of hip operations and individual adaption of endoprosthesis in orthopedic surgery. Int J Medical Informatics 2000; 58: 21-8.
  • 6 Richolt JA, Hata N, Kikinis R, Kordelle J, Millis MB. Three-dimensional bone angle quantification. In Bankman I. (ed) Handbook of Medical Image Processing. Academic Press; 2000
  • 7 Höhne KH, Bomanns M, Riemer M, Schubert R, Tiede U, Lierse W. A 3D anatomical atlas based on a volume model. IEEE Comput Graphics Appl 1992; 12: 72-8.
  • 8 Gee JC, Reivich M, Bajcsy R. Elastically deforming 3D atlas to match anatomical brain images. J Comp Assis Tomogr 1993; 17: 225-36.
  • 9 Kikinis R, Shenton ME, Iosifescu DV, McCarley RW, Saiviroonporn P, Hokama HH. et al. A digital brain atlas for surgical planning, model-driven segmentation and teaching. IEEE Trans Visualiz Comput Graphics 1996; 2: 232-41.
  • 10 Ackermann MJ. The Visible Human Project: A resource for anatomical visualization. In Cesnik B, McCray AT, Scherrer J-R. (eds) MEDINFO ’98. Proc of the 9th World Congress on Medical Informatics; Seoul, Korea. 1998: 1030-2.
  • 11 Lorensen WE, Cline HE. Marching cubes: a high resolution 3-D surface construction algorithm. Computer Graphics 1987; 21: 163-9.
  • 12 Woods RP, Grafton ST, Holmes CJ, Cherry SR, Mazziotta JC. Automated image registration: I. General methods and intrasubject, intramodality validation. J Comp Assis Tomogr 1998; 22: 141-54.
  • 13 Collins DL, Neelin P, Peters TM, Evans AC. Automatic 3D intersubject registration of MR volumetric data in standardized Tailarach space. J Comp Assis Tomogr 1994; 18: 192-205.
  • 14 Bajcsy R, Kovacic S. Multiresolution elastic matching. Computer Vision, Graphics and Image Processing 1989; 46: 1-21.
  • 15 Christensen GE, Miller MI, Vannier M. 3D brain mapping using a deformable neuroanatomy. Phys Med Biol 1994; 39: 609-18.
  • 16 Bro-Nielsen M, Gramkow C. Fast fluid registration of medical images. In Höhne KH, Kikinis R. (eds) Proc of the Visualization in Biomedical Computing Conference; Hamburg, Germany. 1996: 267-76.
  • 17 Maintz JBA, Viergever MA. A survey of medical image registration. Medical Image Analysis 1998; 2: 1-36.
  • 18 Thirion JP. Image matching as a diffusion process: an analogy with Maxwell's demons. Medical Image Analysis 1998; 2: 243-60.
  • 19 Dawant BM, Thirion J-P, Maes F, Vandermeulen D, Demaerel P. Automatic 3D segmentation of internal structures of the head in MR images using a combination of similarity and freeform transformations. In Hanson KM. (ed) Medical Imaging 1998: Image Processing (MI ’98). Proc. SPIE 3338; San Diego. 1998: 545-54.
  • 20 Guimond A, Meunier J, Thirion J-P. Average brain models: A convergence study. Computer Vision and Image Understanding. 2000; 77: 192-210.
  • 21 Schroeder WJ, Zarge JA, Lorensen WE. Decimation of triangle meshes. In: SIGGRAPH92; Chicago. 1992: 163-9.
  • 22 Rohr K. Differential Operators for Detecting Point Landmarks. Image and Vision Computing 1997; 15: 219-33.
  • 23 Frantz S, Rohr K, Stiehl HS. Localization of 3D anatomical point landmarks in 3D tomographic images using deformable models. In Delp SL, DiGioia M, Jaramaz B. (eds) MICCAI 2000. Medical Image Computing and Computer-Assisted Intervention. 2000: 492-501.
  • 24 Besl PJ, McKay ND. A method for registration of 3D shapes. IEEE Trans Patt Anal Machine Intell 1992; 14 (02) 239-56.
  • 25 Andresen PR, Nielsen M. Non-rigid registration by geometry-constrained diffusion. Medical Image Analysis. 2001; 5: 81-8.
  • 26 Schroeder WJ, Martin K, Lorensen WE. The Visualization Toolkit. New Jersey: Prentice Hall; 1998
  • 27 Desbrun M, Meyer M, Schröder P, Barr AH. Implicit fairing of irregular meshes using diffusion curvature flow. In: SIGGRAPH’99. 1999: 317-24.
  • 28 Preparata FP, Shamos MI. Computational Geometry: An Introduction. Springer: 1985
  • 29 Clarenz U, Dziuk G, Rumpf M. On generalized mean curvature flow in surface processing. In Hildebrandt S, Karcher H. (eds) Geometric analysis and nonlinear partial differential equations. 2002
  • 30 Nikou C, Jaramaz B, DiGioia AM, Levison TJ. Description of anatomic coordinate systems and rationale for use in an image-guided Total Hip Replacement system. In: MICCAI 2000. Medical Image Computing and Computer Assisted Intervention. 2000: 1188-94.