Issue 5, 2024

Analysis of short contacts in crystals of halogenated amino acids: atom–atom interactions vs. energy frameworks

Abstract

We investigated eight crystal structures of a series of chlorinated and iodinated alanine derivatives with different protective groups on carboxyl and amino functionalities. The crystal packing is determined by the H-bonding type interactions, primarily of the amide group, as well as of the acidic hydrogens of the stereogenic center and –CH2X (X = Cl or I) groups. These types of hydrogen bonding are similar to what is found in nature as seen in the secondary structures of proteins, i.e., α-helices and β-sheets, which are necessary to stabilize the three-dimensional structures of amino acid-based polymers. Two iodinated derivatives demonstrated either type II I⋯I halogen interactions or I⋯O multipolar interactions, whereas no indication of halogen bonding interactions was seen among the chlorinated derivatives. To a large extent, the packing is stabilized by dispersion forces, a conclusion drawn from the analysis of energy lattice networks performed with the help of Crystal Explorer.

Graphical abstract: Analysis of short contacts in crystals of halogenated amino acids: atom–atom interactions vs. energy frameworks

Supplementary files

Article information

Article type
Paper
Submitted
17 Oct 2023
Accepted
08 Dec 2023
First published
14 Dec 2023
This article is Open Access
Creative Commons BY-NC license

CrystEngComm, 2024,26, 604-619

Analysis of short contacts in crystals of halogenated amino acids: atom–atom interactions vs. energy frameworks

F. J. De Beer, F. J. F. Jacobs, A. Ntsila, D. V. Kama and V. A. Azov, CrystEngComm, 2024, 26, 604 DOI: 10.1039/D3CE01029E

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