Issue 20, 2003

Selective photostabilisation of guanine by methylation

Abstract

Structural and dynamic properties of N7-methyl and N9-methyl keto guanine in the lowest singlet ππ* electronically excited state, S1, have been investigated using a density functional restricted open-shell Kohn–Sham approach. The excited state geometry of N7-methyl guanine deviates little from the unmethylated N7H species, whereas N9-methyl guanine surprisingly exhibits large qualitative structural differences compared to the N9H tautomer. In particular the strongly out-of-plane bent amino group of N9-methyl guanine is expected to significantly reduce its optical absorption cross section in this spectral region. Furthermore, on-the-fly molecular dynamics simulations of S1 vertically excited N9-methyl keto guanine reveal that in the first roughly 10 fs after photoexcitation a local minimum corresponding to a quasi-planar geometry is populated which is, however, thermally unstable and decays to the heavily distorted global minimum structure on the timescale of 100 fs. In contrast, vertically excited N7-methyl keto guanine is seen to relax to its comparatively mildly distorted S1 global minimum structure within approximately 10 fs. These findings offer a possible explanation for the absence of a N9-methyl keto signal in recent molecular beam IR–UV spectral measurements. In addition, we propose that the special photophysical properties of the biologically relevant N9-substituted keto guanine tautomers may indeed have played an important role in the evolutionary selection of DNA building blocks.

Supplementary files

Article information

Article type
Communication
Submitted
30 Jul 2003
Accepted
10 Sep 2003
First published
12 Sep 2003

Phys. Chem. Chem. Phys., 2003,5, 4516-4518

Selective photostabilisation of guanine by methylation

H. Langer and N. L. Doltsinis, Phys. Chem. Chem. Phys., 2003, 5, 4516 DOI: 10.1039/B309031K

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