Issue 13, 1998

Structure and tautomeric properties of thymine derivatives generated by hydroxyl radical in aerobic conditions

Abstract

The tautomeric properties of five hydroxyl radical-induced thymine derivatives: thymine glycol (1), 5-formyldeoxyuracil (2), 5-hydroxymethyluracil (3), N-tatronyluridine (4) and 5-hydroxymethylhydantoine (5) were characterised by abinitio HF (6-311G**), MP2 (6-311G**) and SCI-PCM (6-311G**) quantum chemistry calculations. Amongst all the tautomers of 1 the I-5eq6ax tautomer (the diketo form with C5 equatorial and C6 axial orientations of the hydroxy groups) is the most stable, in both polar and non-polar environments. The most stable tautomer of 2 is the diketo form with the carbonyl group oriented in such a way that the maximum distance between O4 and OC5 oxygen atoms is preserved. By analogy, the preferred tautomeric form of 3 corresponds to the diketo isomer. Among the potential 43 isomers of 4 the most stable is that in the diketo-amino form with anti-conformation of the C2–N3–C4–C5 torsion angle and equatorial conformation of the C5 chirality centre. Finally, the most probable structure of 5 is the diketo tautomeric form.

Article information

Article type
Paper

J. Chem. Soc., Faraday Trans., 1998,94, 1813-1821

Structure and tautomeric properties of thymine derivatives generated by hydroxyl radical in aerobic conditions

P. Cysewski, D. Jeziorek and R. Oliński, J. Chem. Soc., Faraday Trans., 1998, 94, 1813 DOI: 10.1039/A800546J

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