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Catenulopyrizomicins, new anti-Hepatitis B virus compounds, from the rare actinomycete Catenuloplanes sp. MM782L-181F7

Abstract

Hepatitis B virus (HBV) causes chronic hepatitis in humans, and current antiviral therapies rarely treat viral infections. To improve the treatment efficacy, novel therapeutic agents, especially those with different mechanisms of action, need to be developed for use in combination with the current antivirals. Here, we isolated new anti-HBV compounds, named catenulopyrizomicins A–C, from the fermentation broth of rare actinomycete Catenuloplanes sp. MM782L-181F7. Structural analysis revealed that these compounds contained a structure that is composed of thiazolyl pyridine moiety. The catenulopyrizomicins reduced the amount of intracellular viral DNA in HepG2.2.15 cells with EC50 values ranging from 1.94 to 2.63 µM with small but notable selectivity. Mechanistic studies indicated that catenulopyrizomicin promotes the release of immature virion particles that fail to be enveloped through alterations in membrane permeability.

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References

  1. Yang HI, Lu SN, Liaw YF, You SL, Sun CA, Wang LY, Hsiao CK, Chen PJ, Chen DS, Chen CJ, Taiwan Community-Based Cancer Screening Project Group 2002. Hepatitis B e antigen and the risk of hepatocellular carcinoma. N Eng J Med. 2002;347:168–74.

    Article  CAS  Google Scholar 

  2. Durantel D, Zoulim F. New antiviral targets for innovative treatment concepts for hepatitis B virus and hepatitis delta virus. J Hepatol. 2016;64:S117–31.

    Article  CAS  PubMed  Google Scholar 

  3. Pei Y, Wang C, Yan SF, Liu G. Past, current, and future developments of therapeutic agents for treatment of chronic hepatitis B virus infection. J Med Chem. 2017;60:6461–79.

    Article  CAS  PubMed  Google Scholar 

  4. Beck J, Nassal M. Hepatitis B virus replication. World J Gastroenterol. 2007;13:48–64.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Seeger C, Mason WS. Molecular biology of hepatitis B virus infection. Virology. 2015;479-480:672–86.

    Article  CAS  PubMed  Google Scholar 

  6. Suzuki M, Kondo S, Yamasaki M, Matsuda N, Nomoto A, Suzuki T, Saito I, Kanegae Y. Efficient genome replication of hepatitis B virus using adenovirus vector: a compact pregenomic RNA-expression unit. Sci Rep. 2017;7:41851.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Takizawa N, Yamasaki M. Current landscape and future prospects of antiviral drugs derived from microbial products. J Antibiot. 2017;71:45–52.

    Article  Google Scholar 

  8. Yamasaki M, Matsuda N, Matoba K, Kondo S, Kanegae Y, Saito I, Nomoto A. Acetophenone 4-nitrophenylhydrazone inhibits Hepatitis B virus replication by modulating capsid assembly. Virus Res. 2021;306:198565.

    Article  CAS  PubMed  Google Scholar 

  9. Nishio M, Tomatsu K, Konishi M, Tomita K, Oki T, Kawaguchi H, Clardy J. Karnamicin, a complex of new antifungal antibiotics. I. Taxonomy, fermentation, isolation and physico-chemical and biological properties. J Antibiot. 1989;42:852–68.

    Article  CAS  Google Scholar 

  10. Urban M, McMillan DJ, Canning G, Newell A, Brown E, Mills JS, Jupp R. In vitro activity of hepatitis B virus polymerase: requirement for distinct metal ions and the viral epsilon stem-loop. J Gen Virol. 1998;79:1121–31.

    Article  CAS  PubMed  Google Scholar 

  11. Toyoda T, Wang Y, Wen Y, Tanaka Y. Fluorescence-based biochemical analysis of human hepatitis B virus reverse transcriptase activity. Anal Biochem. 2020;597:113642.

    Article  CAS  PubMed  Google Scholar 

  12. Chang LJ, Hirsch RC, Ganem D, Varmus HE. Effects of insertional and point mutations on the functions of the duck hepatitis B virus polymerase. J Virol. 1990;64:5553–8.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  13. Wei X, Peterson DL. Expression, purification, and characterization of an active RNase H domain of the hepatitis B viral polymerase. J Biol Chem. 1996;271:32617–22.

    Article  CAS  PubMed  Google Scholar 

  14. Lu G, Lomonosova E, Cheng X, Moran EA, Meyers MJ, Le Grice SF, Thomas CJ, Jiang JK, Meck C, Hirsch DR, D’Erasmo MP, Suyabatmaz DM, Murelli RP, Tavis JE. Hydroxylated tropolones inhibit hepatitis B virus replication by blocking viral ribonuclease H activity. Antimicrob Agents Chemother. 2015;59:1070–9.

    Article  PubMed  PubMed Central  Google Scholar 

  15. Jiang B, Hildt E. Intracellular trafficking of HBV particles. Cells. 2020;9:2023.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  16. Lenhoff RJ, Summers J. Coordinate regulation of replication and virus assembly by the large envelope protein of an avian hepadnavirus. J Virol. 1994;68:4565–71.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  17. Ning X, Nguyen D, Mentzer L, Adams C, Lee H, Ashley R, Hafenstein S, Hu J. Secretion of genome-free hepatitis B virus - single strand blocking model for virion morphogenesis of para-retrovirus. PLoS Pathog. 2011;7:e1002255.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  18. Bai L, Zhang X, Kozlowski M, Li W, Wu M, Liu J, Chen L, Zhang J, Huang Y, Yuan Z. Extracellular hepatitis B Virus RNAs are heterogeneous in length and circulate as capsid-antibody complexes in addition to virions in chronic hepatitis B patients. J Virol. 2018;92:e00798–18.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  19. Yu Z, Huang JP, Yang J, Liu C, Yan Y, Wang L, Zhao J, Chen Y, Xiang W, Huang SX. Discovery and biosynthesis of karnamicins as angiotensin converting enzyme inhibitors. Nat Commun. 2023;14:209.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  20. Tsurumi Y, Ueda H, Hayashi K, Takase S, Nishikawa M, Kiyoto S, Okuhara M. WS75624 A and B, new endothelin converting enzyme inhibitors isolated from Saccharothrix sp. No. 75624. I. Taxonomy, fermentation, isolation, physico-chemical properties and biological activities. J Antibiot. 1995;48:1066–72.

    Article  CAS  Google Scholar 

  21. Yoshimura S, Tsurumi Y, Takase S, Okuhara M. WS75624 A and B, new endothelin converting enzyme inhibitors isolated from Saccharothrix sp. No. 75624. II. Structure elucidation of WS75624 A and B. J Antibiot. 1995;48:1073–5.

    Article  CAS  Google Scholar 

  22. Kimura T, Inahashi Y, Matsuo H, Suga T, Iwatsuki M, Shiomi K, Takahashi Y, Ōmura S, Nakashima T. Pyrizomicin A and B: structure and bioactivity of new thiazolyl pyridines from Lechevalieria aerocolonigenes K10-0216. J Antibiot. 2018;71:606–8.

    Article  CAS  Google Scholar 

  23. Guo F, Zhao Q, Sheraz M, Cheng J, Qi Y, Su Q, Cuconati A, Wei L, Du Y, Li W, Chang J, Guo JT. HBV core protein allosteric modulators differentially alter cccDNA biosynthesis from de novo infection and intracellular amplification pathways. PLoS Pathog. 2017;13:e1006658.

    Article  PubMed  PubMed Central  Google Scholar 

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Acknowledgements

We thank Dr. Yasuhiro Takehana and Ms. Rie Arisaka for their technical assistance with isolating catenulopyrizomicins, and Dr. Kiyoko Iijima for the HRESI-MS and NMR measurements. We would like to thank Editage (www.editage.jp) for English language editing. This study is dedicated to the memory of Dr. Akio Nomoto, passed away in 2014, who inspired us a lot to find microbial compounds with antiviral activities. This study was supported by JSPS KAKENHI (grant number JP15K08507) and the Research Program on Hepatitis of the Japan Agency for Medical Research and Development (AMED) (grant number JP20fk0310102).

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Correspondence to Manabu Yamasaki.

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Yamasaki, M., Sawa, R., Muramatsu, H. et al. Catenulopyrizomicins, new anti-Hepatitis B virus compounds, from the rare actinomycete Catenuloplanes sp. MM782L-181F7. J Antibiot 77, 85–92 (2024). https://doi.org/10.1038/s41429-023-00681-4

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