Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Letter
  • Published:

Nucleotide sequence of a macronuclear gene for actin in Oxytricha fallax

Abstract

The hypotrichous ciliated protozoan Oxytricha fallax possesses a mechanism for processing its genome into a collection of small, gene-sized, transcriptionally active sections. Macronuclear DNA is arranged as short achromosomal sections, 0.5–22 kilo-base pairs (kbp) long, while micronuclear DNA has a typical chromosomal organization1,2. Macronuclear DNA is derived from micronuclear DNA by a process of polytene chromosome fragmentation with a resultant decrease in DNA sequence complexity3,4. The isolation of intact macronuclear DNA sections enables the study of specific structural units of genetic material that occur naturally in the organism. We have previously described5 the construction of a recombinant plasmid, pOfACT (1.6), which contains an intact 1.6-kb length of macronuclear DNA (Fig. 1) homologous to a yeast actin gene6. We now present the complete nucleotide sequence of the cloned DNA molecule and the derived sequence of the actin protein which it encodes. As the sequence is that of a complete, naturally occurring DNA molecule, it shows all cis-active regulatory regions in addition to the coding region. The actin protein encoded differs considerably from other known actins.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Similar content being viewed by others

References

  1. Prescott, D. M. & Murti, K. G. Cold Spring Harb. Symp. quant. Biol. 38, 609–618 (1973).

    Article  Google Scholar 

  2. Rae, P. M. M. & Spear, B. B. Proc. natn. Acad. Sci. U.S.A. 75, 4992–4996 (1978).

    Article  ADS  CAS  Google Scholar 

  3. Ammermann, D. Chromosoma (Berl.) 33, 209–238 (1971).

    Article  CAS  Google Scholar 

  4. Lauth, M. R., Spear, B. B., Heumann, J. & Prescott, D. M. Cell 7, 67–74 (1976).

    Article  CAS  Google Scholar 

  5. Kaine, B. P. & Spear, B. B. Proc. natn. Acad. Sci. U.S.A. 77, 5336–5340 (1980).

    Article  ADS  CAS  Google Scholar 

  6. Ng, R. & Abelson, J. Proc. natn. Acad. Sci. U.S.A. 77, 3912–3916 (1980).

    Article  ADS  CAS  Google Scholar 

  7. Maxam, A. M. & Gilbert, W. Proc. natn. Acad. Sci. U.S.A. 74, 560–564 (1977).

    Article  ADS  CAS  Google Scholar 

  8. Oka, Y., Shiota, S., Nakai, S., Niskida, Y. & Okuba, S. Gene 10, 301–306 (1980).

    Article  CAS  Google Scholar 

  9. Klobutcher, L. A., Swanton, M. T., Donini, P. & Prescott, D. M. Proc. natn. Acad. Sci. U.S.A. 78, 3015–3019 (1981).

    Article  ADS  CAS  Google Scholar 

  10. Baker, C. C., Herisse, J., Courtois, G., Galibert, E. & Ziff, E. Cell 18, 569–580 (1979).

    Article  CAS  Google Scholar 

  11. Lewin, B. Gene Expression Vol. 2, 2nd edn (Wiley, New York, 1980).

    Google Scholar 

  12. Pribnow, D. Proc. natn. Acad. Sci. U.S.A. 72, 784–788 (1975).

    Article  ADS  CAS  Google Scholar 

  13. Efstratiadis, A. et al. Cell 21, 653–668 (1980).

    Article  CAS  Google Scholar 

  14. Proudfoot, N. J. & Brownlee, G. G. Nature 263, 211–214 (1976).

    Article  ADS  CAS  Google Scholar 

  15. Konkel, D. A., Tilghman, S. M. & Leder, P. Cell 15, 1125–1132 (1978).

    Article  CAS  Google Scholar 

  16. Korn, L. J. & Brown, D. D. Cell 15, 1145–1156 (1978).

    Article  CAS  Google Scholar 

  17. Soeda, E., Miura, K., Nakaso, A. & Kimura, G. FEES Lett. 79, 383–389 (1977).

    Article  CAS  Google Scholar 

  18. Stinchcomb, D. T., Thomas, M., Kelly, J., Selker, E. & Davis, R. W. Proc. natn. Acad. Sci. U.S.A. 77, 4559–4563 (1980).

    Article  ADS  CAS  Google Scholar 

  19. Tschumper, G. & Carbon, J. J. supramolec. Struct. Cell Biochem. Suppl. 5, 346 (1981).

    Google Scholar 

  20. Vanderkerckhove, J. & Weber, K. J. molec. Biol. 126, 783–802 (1978).

    Article  Google Scholar 

  21. Nanney, D. L. Experimental Ciliatology (Wiley, New York, 1980).

    Google Scholar 

  22. Williams, N. E., Vaudaux, P. E. & Skriver, L. Expl Cell Res. 123, 311–320 (1979).

    Article  CAS  Google Scholar 

  23. Numata, O., Yasuda, T., Hirabayashi, T. & Watanabe, Y. Expl Cell Res. 129, 223–230 (1980).

    Article  CAS  Google Scholar 

  24. Firtel, R. A. Cell 24, 6–7 (1981).

    Article  CAS  Google Scholar 

  25. Dayhoff, M. O., McLaughlin, P. J., Barker, W. C. & Hunt, L. T. Naturwissenschaften 62, 154–161 (1975).

    Article  ADS  CAS  Google Scholar 

  26. Ragan, M. A. & Chapman, D. J. A Biochemical Phytogeny of the Protists (Academic, New York, 1978).

    Google Scholar 

  27. Glover, C. V. C. & Gorovsky, M. A. Proc. natn. Acad. Sci. U.S.A. 76, 585–589 (1979).

    Article  ADS  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Kaine, B., Spear, B. Nucleotide sequence of a macronuclear gene for actin in Oxytricha fallax. Nature 295, 430–432 (1982). https://doi.org/10.1038/295430a0

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1038/295430a0

This article is cited by

Comments

By submitting a comment you agree to abide by our Terms and Community Guidelines. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate.

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing