Skip to main content
Log in

Molecular–cytogenetic characterization of the origin and the presence of pericentromeric euchromatin on minute supernumerary marker chromosomes (SMCs)

  • Published:
Chromosome Research Aims and scope Submit manuscript

Abstract

Small supernumerary marker chromosomes (SMCs) in human can be defined as additional centric chromosome fragments smaller than chromosome 20. For most small or minute SMCs a correlation with clinical symptoms is lacking, mostly due to problems in visualizing their euchromatic content. Recently we described two new molecular cytogenetic approaches for the comprehensive characterization of small SMCs, excluding those few cases with neo-centromeres. Minute SMCs, consisting preferentially of alpha-satellite DNA, are characterizable in one step by the centromere-specific multicolor FISH (cenM-FISH) approach. For further characterization of minute SMCs and eventually present euchromatic content, the recently developed centromere-near-specific multicolor FISH (subcenM-FISH) technique can be applied. These two approaches are highly informative and easy to perform, as demonstrated in the present report on the example of a prenatal case with a minute SMC derived from chromosome 3 cytogenetically described as min(3)(:p12.1→q11.2:).

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Anderlid BM, Sahlen S, Schoumans J et al. (2001) Detailed characterization of 12 supernumerary ring chromosomes using micro-FISH and search for uniparental disomy. Am J Med Genet 99: 223-233.

    Article  PubMed  CAS  Google Scholar 

  • Barbi G, Spaich C, Adolph S, Kehrer-Sawatzki H (2003) Analphoid de novo marker chromosome inv dup(3)(q28qter) with neocentromere in a dysmorphic and developmentally retarded girl. J Med Genet 40: e27.

    Article  PubMed  CAS  Google Scholar 

  • Betz A, Turleau C, de Grouchy J (1974) [Heterozygosity and homozygosity for a pericentric inversion of human chromosome 3]. Ann Genet 17: 79-80.

    PubMed  CAS  Google Scholar 

  • Callen DF, Eyre HJ, Ringenbergs ML, Freemantle CJ, Woodroffe P, Haan EA (1991) Chromosomal origin of small ring marker chromosomes in man: characterization by molecular genetics. Am J Hum Genet 48: 769-782.

    PubMed  CAS  Google Scholar 

  • Cockwell AE, Gibbons B, Moore IE, Crolla JA (2000) An analphoid supernumerary marker chromosome derived from chromosome 3 ascertained in a fetus with multiple malformations. J Med Genet 37: 807-810.

    Article  PubMed  CAS  Google Scholar 

  • Crolla JA, Howard P, Mitchell C, Long FL, Dennis NR (1997) A molecular and FISH approach to determining karyotype and phenotype correlations in six patients with supernumerary marker(22) chromosomes. Am J Med Genet 72: 440-447.

    Article  PubMed  CAS  Google Scholar 

  • Hills LV, Nouri S, Slater HR (2003) Pericentromeric euchromatin is conserved in minute human supernumerary chromosomes: a study using cross-species colour segmenting (RxFISH). Chromosome Res 11: 359-363.

    Article  PubMed  CAS  Google Scholar 

  • Ilberry PLT, Lee CWG, Winn SM (1961) Incomplete trisomy in a mongoloid child exhibiting minimal stigmata. Med J Austr 48: 182-184.

    Google Scholar 

  • James RS, Temple IK, Dennis NR, Crolla JA (1995) A search for uniparental disomy in carriers of supernumerary marker chromosomes. Eur J Hum Genet 3: 21-26.

    PubMed  CAS  Google Scholar 

  • Kotzot D (1999) Abnormal phenotypes in uniparental disomy (UPD): fundamental aspects and a critical review with bibliography of UPD other than 15. Am J Med Genet 82: 265-274.

    Article  PubMed  CAS  Google Scholar 

  • Levy B, Jalal SM, Dunn TM et al. (2002) Unique case of mosaicism involving two morphologically similar marker chromosomes of different centric origin in a patient with developmental delay. Am J Med Genet 108: 198-204.

    Article  PubMed  Google Scholar 

  • Liehr T, Heller A, Starke H et al. (2002) Microdissection based high resolution multicolor banding for all 24 human chromosomes. Int J Mol Med 9: 335-9.

    PubMed  CAS  Google Scholar 

  • Liehr T, Nietzel A, Starke H et al. (2003) Characterization of small marker chromosomes (SMC) by recently developed molecular cytogenetic approaches. J Ass Genet Techn 29: 5-10.

    Google Scholar 

  • Müller-Navia J, Nebel A, Schleiermacher E (1995) Complete and precise characterization of marker chromosomes by application of microdissection in prenatal diagnosis. Hum Genet 96: 661-667.

    Article  PubMed  Google Scholar 

  • Müller-Navia J, Nebel A, Oehler D, Theile U, Zabel B, Schleiermacher E (1996) Microdissection and DOP-PCR-based reverse chromosome painting as a fast and reliable strategy in the analysis of various structural chromosome abnormalities. Prenat Diagn 16: 915-922.

    Article  PubMed  Google Scholar 

  • Nietzel A, Rocchi M, Starke H, et al. (2001) A new multicolor-FISH approach for the characterization of marker chromosomes: centromere-specific multicolor-FISH (cenMFISH). Hum Genet 108: 199-204.

    Article  PubMed  CAS  Google Scholar 

  • Oliver-Bonet M, Liehr T, Nietzel A et al. (2003) Karyotyping of human synaptonemal complexes by cenM-FISH. Eur J Hum Genet 11: 879-883.

    Article  PubMed  CAS  Google Scholar 

  • Paoloni-Giacobino A, Morris MA, Dahoun SP (1998) Prenatal supernumerary r(16) chromosome characterized by multiprobe FISH with normal pregnancy outcome. Prenat Diagn 18: 751-752.

    Article  PubMed  CAS  Google Scholar 

  • Portnoi MF, Boutchnei S, Bouscarat F et al. (1999) Skin pigmentary anomalies and mosaicism for an acentric marker chromosome originating from 3q. J Med Genet 36: 246-250.

    PubMed  CAS  Google Scholar 

  • Rauch A, Pfeiffer RA, Trautmann U, Liehr T, Rott HD, Ulmer R (1992) Study of ten small supernumerary (marker) chromosomes identified by fluorescence in situ hybridization (FISH). Clin Genet 42: 84-90.

    Article  PubMed  CAS  Google Scholar 

  • Rothemund H, Greenberg CR, Dawson AJ (1998) Mosaic supernumerary marker chromosome identified as a der(3) by FISH. Clin Genet 54: 526-527.

    Article  PubMed  CAS  Google Scholar 

  • Starke H, Nietzel A, Weise A et al. (2003a) Small supernumerary marker chromosomes (SMCs): genotype-phenotype correlation and classification. Hum Genet 114: 51-67.

    Article  PubMed  CAS  Google Scholar 

  • Starke H, Mitulla B, Nietzel A et al. (2003b) First case of trisomy 21 accompanied by an additional der(4)(:p11?q11:) plus partial uniparental disomy 4p15-16. Am J Med Genet 116A: 26-30.

    Article  PubMed  Google Scholar 

  • Teshima I, Bawle EV, Weksberg R, Shuman C, Van Dyke DL, Schwartz S (2000) Analphoid 3qter markers. Am J Med Genet 94: 113-119.

    Article  PubMed  CAS  Google Scholar 

  • Viersbach R, Engels H, Gamerdinger U, Hansmann M (1998) Delineation of supernumerary marker chromosomes in 38 patients. Am J Med Genet 76: 351-358.

    Article  PubMed  CAS  Google Scholar 

  • von Eggeling F, Hoppe C, Bartz U et al. (2002) Maternal uniparental disomy 12 in a healthy girl with a 47,XX, +der(12)(:p11?q11:)/46,XX karyotype. J Med Gen 39: 519-521.

    Article  CAS  Google Scholar 

  • Wandall A, Tranebjaerg L, Tommerup N (1998) A neocentromere on human chromosome 3 without detectable alpha-satellite DNA forms morphologically normal kinetochores. Chromosoma 107: 359-65.

    Article  PubMed  CAS  Google Scholar 

  • Warburton D (1991) De novo balanced chromosome rearrangements and extra marker chromosomes identified at prenatal diagnosis: clinical significance and distribution of breakpoints. Am J Hum Genet 49: 995-1013.

    PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Liehr, T., Hickmann, G., Kozlowski, P. et al. Molecular–cytogenetic characterization of the origin and the presence of pericentromeric euchromatin on minute supernumerary marker chromosomes (SMCs). Chromosome Res 12, 239–244 (2004). https://doi.org/10.1023/B:CHRO.0000021916.18019.1c

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1023/B:CHRO.0000021916.18019.1c

Navigation