Skip to main content
Log in

EMAP-Surface Waters: a multiassemblage, probability survey of ecological integrity in the U.S.A.

  • Published:
Hydrobiologia Aims and scope Submit manuscript

Abstract

Data analyzed at national, multistate or state scales often reveal more serious deterioration of various biological assemblages than that suspected from site specific studies simply because the impacts are observed regionally rather than locally. Unfortunately many regional assessments are based on data collected with differing sampling designs and methods, making their representativeness, accuracy and precision questionable. In 1989, the United States Environmental Protection Agency (USEPA) began EMAP-Surface Waters (EMAP-SW), a program for developing methods to monitor and assess status and trends in the nation's lakes and rivers in a statistically and ecologically rigorous manner. EMAP-SW has now conducted regional multistate pilots in streams and rivers throughout the U.S.A. in collaboration with State agencies, universities and EPA regional offices. We discuss EMAP's conceptual design, which focuses on biological integrity through use of multiple biological assemblages and includes physical and chemical habitat and landscape characteristics. When coupled with appropriate biological indicators, a probability-based design enabled us to provide accurate, precise and unbiased assessments of biological conditions, along with quantitative estimates of sampling uncertainty. Regional EMAP-SW surveys indicated the importance of assessing multiple biological assemblages because each assemblage was differentially sensitive to different stressors and at different spatial scales. Synthesizing multiple metrics from multiple assemblages allowed us to detect the effects of multiple anthropogenic disturbances. We also illustrate the value of using historical reconstruction and paleolimnological data for determining reference conditions where disturbance is extensive. We conclude that an EMAP approach to sampling design and indicators (recognizing natural ecoregional differences) has distinct advantages for monitoring and assessments that may be applicable to European Communities seeking to assess the ecological integrity of waters.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Allan, J. D. & A. S. Flecker, 1993. Biodiversity conservation in running waters. BioScience 43: 32–43.

    Google Scholar 

  • Allen, A. P., T. R. Whittier, P. R. Kaufmann, D. P. Larsen, R. J. O'Connor, R. M. Hughes, R. S. Stemberger, S. S. Dixit, R. O. Brinkhurst, A. T. Herlihy & S. G. Paulsen, 1999a. Concordance of taxonomic composition patterns across multiple lake assemblages: effects of scale, body size, and land use. Can. J. Fish. aquat. Sci. 56: 2029–2040.

    Google Scholar 

  • Allen, A. P., T. R. Whittier, P. R. Kaufmann, D. P. Larsen, R. J. O'Connor, R. M. Hughes, R. S. Stemberger, S. S. Dixit, R. O. Brinkhurst, A. T. Herlihy & S. G. Paulsen, 1999b. Concordance of taxonomic richness patterns across multiple assemblages in lakes of the northeastern U.S.A. Can. J. Fish. aquat. Sci. 56: 739–747.

    Google Scholar 

  • Averill, D. K. & D. V. Peck (eds), 1999. Field Operations and Methods for Measuring the Ecological Condition of Non-wadeable Rivers in Oregon. U. S. Environmental Protection Agency, Corvallis, OR: 219 pp.

    Google Scholar 

  • Baker, J. R., D. V. Peck & D. W. Sutton, 1997. Field operations manual for lakes, EPA/620/R-97/001. U.S. Environmental Protection Agency, Corvallis, OR: 241 pp.

    Google Scholar 

  • Baker, L. A., A. T. Herlihy, P. R. Kaufmann & J. M. Eilers, 1991. Acidic lakes and streams in the United States: the role of acidic deposition. Science 252: 1151–1154.

    Google Scholar 

  • Bryce, S. A., D. P. Larsen, R. M. Hughes & P. R. Kaufmann, 1999. Assessing relative risks to aquatic ecosystems: a mid-Appalachian case study. J. Am. Wat. Res. Assoc. 35: 23–36.

    Google Scholar 

  • Chovanec, A., V. Koller-Kreimel, O. Moog & S. Weiss, 1995. Assessment of the ecological integrity of running waters: the Austrian approach. Proceedings of the International Workshop on Assessment and Classification of Rivers, Düsseldorf, Germany.

  • Commission of the European Communities, 1994. Proposal for a council directive on the ecological quality of water, COM (93) 680 final, 15.06.1994, Office for Official Publications of the European Communities, Luxembourg.

    Google Scholar 

  • Croonquist, M. J., & R. P. Brooks, 1991. Use of avian and mammalian guilds as indicators of cumulative impacts in riparianwetland areas. Environ. Manage. 15: 701–714.

    Google Scholar 

  • Dixit, S. S. & J. P. Smol, 1994. Diatoms as indicators in the Environmental Monitoring and Assessment Program-Surface Waters (EMAP-SW). Environ. Monitor. Assess. 31: 275–306.

    Google Scholar 

  • Dixit, S. S., J. P. Smol, J. C. Kingston & D. F. Charles, 1992. Diatoms: powerful indicators of environmental change. Environ. Sci. Technol. 26: 22–33.

    Google Scholar 

  • Dixit, S. S., J. P. Smol, D. F. Charles, R. M. Hughes, S. G. Paulsen & G. B. Collins, 1999. Assessing water quality changes in the lakes of the northeastern United States using sediment diatoms. Can. J. Fish. aquat. Sci. 56: 131–152.

    Google Scholar 

  • Eilers, J. M., D. F. Brakke, D. H. Landers, and P. E. Kellar, 1988. Characteristics of lakes in mountainous areas of the western United States. Proceed. Internat. Assoc. Theo. Appl. Limnol. 23: 144–151.

    Google Scholar 

  • EMAP (Environmental Monitoring and Assessment Program), 1997. Research Plan 1997. U.S. Environmental Protection Agency. Washington, DC: 138 pp.

    Google Scholar 

  • Fausch, K. D., J. R. Karr & P. R. Yant, 1984. Regional application of an index of biotic integrity based on stream fish communities. Trans. Am. Fish. Soc. 113: 39–55.

    Google Scholar 

  • Fausch, K. D., J. Lyons, J. R. Karr & P. L. Angermeier, 1990. Fish communities as indicators of environmental degradation. In Adams, S. M. (ed.), Biological Indicators of Stress in Fish. American Fisheries Society Symposium, Bethesda, MD 8: 123–144.

  • Harding, J. S., E. F. Benfield, P. V. Bolstad, G. S. Helfman & E. B. D. Jones III, 1998. Stream biodiversity: the ghost of land use past. Proc. natn. Acad. Sci. U.S.A. 95: 14843–14847.

    Google Scholar 

  • Hren, J., C. J. Oblinger Childress, J. M. Norris, T. H. Chaney & D. N. Meyers, 1990. Regional water quality: evaluation of data for assessing conditions and trends. Envir. Sci. Technol. 24: 1122–1127.

    Google Scholar 

  • Hughes, R. M., 1995. Defining acceptable biological status by comparing with reference conditions. In Davis, W. S. & T. P. Simon (eds), Biological Assessment and Criteria: Tools for Water Resource Planning and Decision Making. Lewis Publishers, Boca Raton, FL: 31–47.

    Google Scholar 

  • Hughes, R. M., 1997. Do we need institutional change? In Stouder, D. J., P. A. Bisson & R. J. Naiman (eds), Pacific Salmon & Their Ecosystems: Status and Future Options. Chapman & Hall, New York: 559–568.

    Google Scholar 

  • Hughes, R. M., 1999. Conservation of natural resources. In Alexander, D. E. & R. W. Fairbridge (eds), Encyclopedia of Environmental Science. Kluwer Academic Publishers, Dordrecht, NL: 90–95.

    Google Scholar 

  • Hughes, R. M. & R. F. Noss, 1992. Biological diversity and biological integrity: current concerns for lakes and streams. Fisheries 17(3): 11–19.

    Google Scholar 

  • Hughes, R. M., P. R. Kaufmann, A. T. Herlihy, T. M. Kincaid, L. Reynolds & D. P. Larsen, 1998. A process for developing and evaluating indices of fish assemblage integrity. Can. J. Fish. aquat. Sci. 55: 1618–1631.

    Google Scholar 

  • Jacobs, S. E. & C. X. Cooney, 1995. Improvement of methods used to estimate the spawning escapement of Oregon coastal natural coho salmon. Oregon Department of Fish & Wildlife. Portland, OR: 24 pp.

    Google Scholar 

  • Judy, R. D. Jr., P. N. Seeley, T. M. Murray, S. C. Svirsky, M. R. Whitworth & L. S. Ischinger, 1984. 1982 national fisheries survey. Volume I technical report: initial findings. U.S. Fish and Wildlife Service, Washington, DC: 140 pp.

    Google Scholar 

  • Karr, J. R., 1991. Biological integrity: a long-neglected aspect of water resource management. Ecol. Appl. 1: 66–84.

    Google Scholar 

  • Karr, J. R., R. C. Heidinger, and E. H. Helmer, 1985. Effects of chlorine and ammonia from wastewater treatment facilities on biotic integrity. J. Wat. Pollut. Cont. Fed. 57: 912–915.

    Google Scholar 

  • Kaufmann, P. R., A. T. Herlihy, M. E. Mitch, J. J. Messer, and W. S. Overton, 1991. Stream chemistry in the eastern United States: synoptic survey design, acid-base status and regional patterns. Wat. Res. Resear. 27: 611–627.

    Google Scholar 

  • Landers, D. H., W. S. Overton, R. A. Linthurst & D. F. Brakke, 1988. Eastern lake survey regional estimates of lake chemistry. Envir. Sci. Technol. 22: 128–135.

    Google Scholar 

  • Larsen, D. P., N. S. Urquhart & D. L. Kugler. 1995. Regional scale trend monitoring of indicators of trophic condition of lakes. Wat Res. Bull. 31: 117–140.

    Google Scholar 

  • Lazorchak, J. M., D. J. Klemm & D. V. Peck, 1998. Field operations and methods for measuring the ecological condition of wadeable streams, EPA/620/R-94/004. U.S. Environmental Protection Agency, Cincinnati, OH: 270 pp.

    Google Scholar 

  • Marsh, G. P., 1885. The Earth as Modified by Human Action. Charles Scribner's Sons, New York: 629 pp.

    Google Scholar 

  • Maxted, J. R., 1997. Biology, probability and the obvious. Human and Ecological Risk Assessment 3: 955–965.

    Google Scholar 

  • Messer. J. J., R. A. Linthurst, & W. S. Overton, 1991. An EPA program for monitoring ecological status and trends. Envir. Monitor. Assess. 17: 67–78.

    Google Scholar 

  • Miller, R. R., J. D. Williams & J. E. Williams, 1989. Extinctions of North American fishes during the past century. Fisheries 14(6): 22–38.

    Google Scholar 

  • Moyle, P. B. & M. P. Marchetti, 1998. Applications of indices of biotic integrity to California streams and watersheds. In Simon, T. P. (ed.), Assessing the Sustainability and Biological Integrity of Water Resources Using Fish Communities. Lewis, Boca Raton, FL: 367–380.

    Google Scholar 

  • Muhar, S., M. Schwarz, S. Schmutz & M. Jungwirth, 2000. Identification of rivers with high and good habitat quality: methodological approach and applications for Austria. Hydrobiologia 422/423: 343–358.

    Google Scholar 

  • Oberdorff, T., J. Guegan & B. Hugueny, 1995. Global scale patterns of fish species richness in rivers. Ecography 18: 345–352.

    Google Scholar 

  • O'Connor, R. J., T. E. Walls & R. M. Hughes, 2000. Using multiple taxonomic groups to index the ecological condition of lakes. Environ. Monitor. Assess. 61: 207–228.

    Google Scholar 

  • Olsen, A. R., D. L. Stevens Jr. & D. White, 1998. Application of global grids in environmental sampling. In Weisberg, S. (ed.), Computing Science and Statistics, volume 30. Interface Foundation of North America, Fairfax Station, VA: 279–284.

    Google Scholar 

  • Overton, W. S., D. White, and D. L. Stevens Jr., 1991. Design report for EMAP, the environmental monitoring and assessment program. EPA/600/3–91/053, U.S. Environmental Protection Agency, Washington, DC: 43 pp.

    Google Scholar 

  • Pan, Y., R. J. Stevenson, B. H. Hill, P. R. Kaufmann & A. T. Herlihy, 1999. Spatial patterns and ecological determinants of benthic algal assemblages in mid-Atlantic Highlands streams. J. Phycol. 35: 460–468.

    Google Scholar 

  • Paulsen, S. G. & R. A. Linthurst, 1993. Biological Monitoring in the Environmental Monitoring and Assessment Program. In Loeb, S. L. & A. Spacie (eds), Biological Monitoring of Aquatic Systems. Lewis, Boca Raton, FL: 297–322.

    Google Scholar 

  • Paulsen, S. G., D. P. Larsen, P. R. Kaufmann, T. R. Whittier, J. R. Baker, D. V. Peck, J. McGue, R. M. Hughes, D. McMullen, D. Stevens, J. L. Stoddard, J. Lazorchak, W. Kinney, A. R. Selle & R. Hjort, 1991. EMAP-Surface Waters monitoring and research strategy: fiscal year 1991. EPA/600/3–91/022, U.S. Environmental Protection Agency, Corvallis, OR: 184 pp.

    Google Scholar 

  • Paulsen, S. G., R. M. Hughes & D. P. Larsen, 1998. Critical elements in describing and understanding our nation's aquatic resources. J. Am. Wat. Res. Assoc. 34: 995–1005.

    Google Scholar 

  • PEER, 1999. Murky waters. Public Employees for Environmental Responsibility, Washington, DC: 44 pp.

    Google Scholar 

  • Petts, G. E., 1989. Historical analysis of fluvial hydrosystems. In Petts, G. E., H. Moller & A. L. Roux (eds), Historical Change of Large Alluvial Rivers: Western Europe. John Wiley & Sons, New York, NY: 1–17.

    Google Scholar 

  • Petts, G. E., H. Moller & A. L. Roux (eds), 1989. Historical Change of Large Alluvial Rivers: Western Europe. John Wiley & Sons, New York, NY.

    Google Scholar 

  • Rathert, D., D. White, J. C. Sifneos & R. M. Hughes, 1999. Environmental correlates of species richness for native freshwater fish in Oregon, U.S.A. J. Biogeogr. 26: 257–273.

    Google Scholar 

  • Raven, P. J., N. T. H. Holmes, F. H. Dawson, P. J. A. Fox, M. Everard, I. R. Fozzard & K. L. Rouen. 1998. River habitat quality: the physical character of rivers and streams in the U.K. and Isle of Man. River Habitat Survey Report No. 2. Environment Agency, Bristol, England: 86 pp.

    Google Scholar 

  • Sahr, K., & D. White, 1998. Discrete global grid systems. In Weisberg, S. (ed.), Computing Science and Statistics, volume 30. Interface Foundation of North America, Fairfax Station, VA: 269–278.

    Google Scholar 

  • Schwaiger, K., J. Grath & A. Chovanec, 1994. Information needs for water quality: the Austrian context. In Advances in Water Quality Monitoring, Technical Reports in Hydrology & Water Resources No. 42. World Meteorological Organization, Geneva, Switzerland: 105–118.

    Google Scholar 

  • Science Advisory Board, 1988. Future risk: research strategies of the 1990s. SAB-EC-88–040. U.S. Environmental Protection Agency, Washington, DC: 221 pp.

    Google Scholar 

  • Science Advisory Board, 1990. Reducing risk: setting priorities and strategies for environmental protection. SAB-EC-90–021. U.S. Environmental Protection Agency, Washington, DC: 425 pp.

    Google Scholar 

  • Smol, J. P., 1992. Paleolimnology: an important tool for effective ecosystem management. J. Aquat. Ecosyst. Health 1: 49–58.

    Google Scholar 

  • Statzner, B., V. H. Resh & A. L. Roux, 1994. The synthesis of longterm ecological research in the context of concurrently developed ecological theory: design of a research strategy for the Upper Rhone River and its alluvial floodplain habitats. Freshwat. Biol. 31: 253–263.

    Google Scholar 

  • Stevens, D. L. Jr., 1994. Implementation of a national monitoring program. J. environ. Manage. 42: 1–29.

    Google Scholar 

  • Stevens, D. L. Jr., 1997. Variable density grid-based sampling designs for continuous spatial populations. Environmetrics 8: 167–195.

    Google Scholar 

  • Stevens, D. L. Jr. & A. R. Olsen, 1999. Spatially restricted surveys over time for aquatic resources. J. Agri. Biol. Environ. Statistics 4: 415–428.

    Google Scholar 

  • Thurow, R. F., D. C. Lee & B. E. Rieman, 1997. Distribution and status of seven native salmonids in the interior Columbia River basin and portions of the Klamath River and Great Basins. N. am. J. Fish. Mgmt. 17: 1094–1110.

    Google Scholar 

  • Urquhart, N. S., W. S. Overton, and D. S. Birks, 1993. Comparing sampling designs for monitoring ecological status and trends: impact of temporal patterns. In Barnett, V. (ed.), Statistics in the Environment. Wiley & Sons, Sussex, England: 71–85.

    Google Scholar 

  • Urquhart, N. S., S. G. Paulsen, and D. P. Larsen, 1998. Monitoring for policy-relevant regional trends over time. Ecol. Appl. 8: 246–257.

    Google Scholar 

  • Van Sickle, J. & R. M. Hughes, 2000. Classification strengths of ecoregions, catchments and geographic clusters for aquatic vertebrates in Oregon. J. n. am. Benthol. Soc. 19.

  • White, D., A. J. Kimerling & W. S. Overton, 1992. Cartographic and geometric components of a global sampling design for environmental monitoring. Cart. Geogr. Info. Syst. 19: 5–22.

    Google Scholar 

  • Whittier, T. R., D. B. Halliwell & S. G. Paulsen, 1997. Cyprinid distributions in northeast U.S.A. lakes: evidence of regionalscale minnow biodiversity losses. Can. J. Fish. aquat. Sci. 54: 1593–1607.

    Google Scholar 

  • Wiederholm, T. & R. K. Johnson, 1997. Monitoring and assessment of lakes and watercourses in Sweden. In Ottens, J. J., F. A. M. Claessen, P. G. Stoks, J. G. Timmerman & R. C. Ward (eds), Monitoring Tailor Made II: Information Strategies in Water Management. Elsevier, New York, NY: 317–329.

    Google Scholar 

  • Williams, J. E., J. E. Johnson, D. A. Hendrickson, S. Contreras-Balderas, J. D. Williams, M. Navarro-Mendoza, D. E. McAllister & J. E. Deacon, 1989. Fishes of North America endangered, threatened or of special concern: 1989. Fisheries 14(6): 2–20.

    Google Scholar 

  • Wright, J. F., D. Moss, P. D. Armitage & M. T. Furse, 1984. A preliminary classification of running-water sites in Great Britain based on macroinvertebrate species and the prediction of community type using environmental data. Freshwat. Biol. 14: 221–256.

    Google Scholar 

  • Yeardley, R. B. Jr., J. M. Lazorchak & S. G. Paulsen, 1998. Elemental fish tissue contamination in northeastern U.S. lakes: evaluation of an approach to regional assessment. Envir. Toxicol. Chem. 17: 1875–1884.

    Google Scholar 

  • Yoder, C. O. & E. T. Rankin, 1998. The role of biological indicators in a state water quality management process. Envir. Monitor. Assess. 51: 61–88.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Hughes, R.M., Paulsen, S... & Stoddard, J.L. EMAP-Surface Waters: a multiassemblage, probability survey of ecological integrity in the U.S.A.. Hydrobiologia 422, 429–443 (2000). https://doi.org/10.1023/A:1017029107669

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1023/A:1017029107669

Navigation