Original ArticleIdentifying suitable tools for variant detection and differential gene expression using RNA-seq data
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Keywords
Variant calling
Differential gene expression
hg38
Multi-mapped reads
Brain tissue
Abbreviation
RNA-seq
RNA-sequence
DG
Differentially expressed gene
GATK
Genome analysis tool kit
GWAS
Genome-wide association study
eQTL
Expression quantitative trait loci
STAR
Spliced Transcripts Alignment to a Reference
SAM
Sequence Alignment Map
PCR
Polymerase chain reaction
GEO
Gene Expression Omnibus
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