ReviewLytic polysaccharide monooxygenase (LPMO)-derived saccharification of lignocellulosic biomass
Introduction
Concerns about global warming and depletion of fossil fuels have accelerated the development of diverse strategies to cope with climate change and achieve carbon neutrality. Given that biomass directly utilizes carbon dioxide through photosynthesis, not only biomass-derived biorefineries have been emerging to replace petroleum-based refineries for producing fuels, materials, and chemicals but also biomass is regarded as one of the most important feedstocks for constructing circular carbon economies (Moon et al., 2022, Park et al., 2022).
Recently, various biomasses including crops, algae, and lignocellulose have been used as renewable feedstocks in biorefineries (Moon et al., 2021, Park et al., 2022). Among them, non-edible lignocellulosic biomass is highlighted, because it circumvents the need for choosing between food and energy and can be produced in large quantities. In lignocellulose-based biorefineries, a thermochemical pretreatment (e.g., dilute acid, alkali, and organosolvent pretreatments) is a first step toward effective conversion in subsequent processes for deconstructing recalcitrant lignin components. Then, saccharification is usually performed to obtain fermentable sugars from cellulosic or hemicellulosic components. Finally, microbial fermentation utilizing fermentable sugars as carbon and energy sources produces target fuels, materials, and chemicals as metabolites (Yoo et al., 2020).
For saccharification of the pretreated lignocellulose, glycosidic hydrolases (GHs) have been widely applied for a long time. Cellulase and hemicellulase act on crystalline polysaccharides in lignocellulose to produce either oligomeric or monomeric sugars through hydrolysis. Thus, studies have focused on improving cellulase/hemicellulose production with high yields, engineering efficient and stable catalysts, developing feasible combinations for subsequent fermentation reactions, and elucidating the catalytic mechanisms (Guo et al., 2018, Min et al., 2021, Min et al., 2022). However, Vaaje-Kolstad et al. (2010) discovered for the first time that lytic polysaccharide monooxygenase (LPMO), a kind of Cu-containing chitin binding protein (CBP) with a flat binding surface, oxidatively boosts the decomposition of polysaccharides; thus, the identification of LPMO profoundly changed the understanding of enzymatic saccharification, which involves the oxidative cleavage of polysaccharides. CBP21 from Serratia marcescens can cleave glycosidic bonds in crystalline chitin, which is an analog of cellulose, and generate oxidized chain ends, thereby promoting decomposition by opening up the inaccessible polysaccharide for hydrolase-driven hydrolysis (Vaaje-Kolstad et al., 2010). Additionally, fundamental studies on the structure and catalytic mechanism of LPMO have been intensively performed to thoroughly uncover the previously unknown oxidative cleavage of cellulosic components (Eijsink et al., 2019, Forsberg et al., 2014a, Kont et al., 2020, Phillips et al., 2011, Quinlan et al., 2011, Simmons et al., 2017). Furthermore, recent studies have revealed that diverse wild-type and engineered LPMOs can contribute to the efficient saccharification of recalcitrant polysaccharides through their synergistic effects with GHs (Bernardi et al., 2021, Cheng et al., 2020, Guo et al., 2020, Ogunyewo et al., 2020, Zhou et al., 2020). Nonetheless, the application of LPMO for actual biorefinery processes has been hindered by drawbacks such as the difficulty of large-scale production and unknown operational stability.
There are many reviews describing the expression and characterization of LPMOs (Li et al., 2022a, Li et al., 2022b), whereas detailed information about their role in saccharification (e.g., synergistic effect) is still lacking thus far. Accordingly, this review mainly focuses on the role and significance of LPMOs in the saccharification of recalcitrant lignocellulosic biomass. The classification of LPMOs and information on their structure, catalytic mechanism, and production via heterologous expression are briefly introduced. In addition, recent progress and perspectives regarding feasible options are discussed including the LPMO-derived synergistic effect with GHs and practical applications in lignocellulose-based biorefineries.
Section snippets
Classification, structural information, and catalytic mechanism
LPMOs are widely distributed in nature and catalyze the cleavage of β-1,4-glycosidic bonds in polysaccharides using an external reductant (e.g., ascorbic acid); thus, LPMOs show great potential for improving enzyme-based saccharification of biomass (Beeson et al., 2012, Kuusk and Väljamäe, 2021). Based on the sequence identity, most fungal and bacterial LPMOs are classified into the AA9 (previously known as GH61) and AA10 (previously known as CBM33) families of auxiliary activity proteins,
Heterologous expression of LPMO
Heterologous expression is a major strategy for the large-scale production of enzymes and is one of the most significant factors affecting the LPMO-driven saccharification of lignocellulosic biomass on a large scale. In this section, the heterologous expression of bacterial and fungal LPMOs is briefly discussed. Table 1 and Table 2 summarize information on previously reported heterologous expression systems of bacterial and fungal LPMOs, respectively, and furthermore provide useful information
Synergistic effect with hydrolase for the cleavage of recalcitrant polysaccharides
LPMOs cannot directly hydrolyze polysaccharides, but LPMOs generate punctures on the crystalline surface of polysaccharides and oxidatively cleave recalcitrant polysaccharides so that other GHs (e.g., endo-glucanase) can be easily accessible, thereby leading to a synergistic effect with GHs and boosting saccharification of recalcitrant polysaccharides as shown in Fig. 1 (Rani Singhania et al., 2021, Srivastava et al., 2021).
Since Harries et al. (2010) reported for the first time that LPMO from
Challenges and future perspectives
Climate change, a major crisis faced by mankind, has shifted the research paradigm from petroleum refineries to biorefineries. In conventional biorefineries, acidic saccharification and enzymatic hydrolysis are commonly used for obtaining fermentable sugars from biomass. Since acidic saccharification often produces inhibitors (e.g., furfural and hydroxymethyl furfural) that hinder cell growth and metabolism in fermentation for producing target fuels and chemicals, recently, biorefineries have
Conclusion
Herein, recent progress in the LPMO-derived saccharification of polysaccharides is comprehensively reviewed. The structure, catalytic mechanism, and recombinant expression of LPMOs are briefly introduced. Additionally, the synergistic effects of LPMOs on GH-derived saccharification are discussed in detail. Given that (i) biorefineries have been highlighted as a strategy for coping with climate change and (ii) LPMOs have recently emerged as significant industrial enzymes applicable for
Declaration of Competing Interest
The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.
Acknowledgment
The authors would like to acknowledge funding from the Research and Development Program of the Korea Institute of Energy Research (KIER-C2-2477) and the National Research Foundation of Korea (NRF)/the Korea government (MSIT) (No. 2022M3J1A1085377). Additionally, the authors thank Dr. Ki-Yeon Kim of KIER for his assistance in preparing Fig. 1.
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2024, Enzyme and Microbial TechnologyA novel fusion transcription factor drives high cellulase and xylanase production on glucose in Trichoderma reesei
2023, Bioresource TechnologyCitation Excerpt :Compared with the low transcription level of bgl1 and cel61b in OEX, the expression of both genes was dramatically elevated (∼200–1300-fold). The enzyme CEL61B, also identified as polysaccharide monooxygenase, has been suggested to boost lignocellulose hydrolysis by oxidation (Moon et al., 2022). Another twelve up-regulated genes belonged to hemicellulase-encoding genes (Fig. 5c).
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2023, Bioresource TechnologyCitation Excerpt :In this phenomenon, researchers have proposed that the inhibition of enzymes by inhibitory compounds can be avoided by using suitable reducing agents, such as chemicals with high reducing potential (Breslmayr et al., 2022). Directed evolution of LPMO (N526S) in Hahella chejuensis resulted in the mutant N526S, which, compared with the wild type, produced gluconic acid by oxidative Gluconic acid production obtained by cleavage of Avicel was 2.7-fold higher (Moon et al., 2022). Meanwhile, a highly xyloglucan active family AA9 cleaved polysaccharide monooxygenase EpLPMO9A was identified from Eupenicillium parvum 4–14, and the oxidative cleavage process of xyloglucan by EpLPMO9A contributes to open the spatial block of cellulose through xyloglucan, which in turn increases the accessibility of cellulase to lignocellulosic substrates (Shi et al., 2021).
Deciphering the efficient cellulose degradation by the thermophilic fungus Myceliophthora thermophila focused on the synergistic action of glycoside hydrolases and lytic polysaccharide monooxygenases
2022, Bioresource TechnologyCitation Excerpt :Currently, efficient enzymatic degradation of cellulose is reported to be involved in the combined action of glycoside hydrolases and auxiliary oxidation enzymes (Cheng et al., 2020; Li et al., 2020; Srivastava et al., 2021), whereas the synergistic action between glycoside hydrolases and auxiliary oxidation enzymes on cellulose degradation remains unclear to date. Cellulose-active lytic polysaccharide monooxygenases (LPMOs) are one kind of copper-dependent auxiliary oxidation enzymes and widely distributed in fungi, bacteria, and insects, belonging to auxiliary activity families 9 (AA9), AA10, AA15, and AA16 according to the classification of carbohydrate-active enzymes database (Moon et al., 2022; Sabbadin et al., 2018; Vandhana et al., 2022). Based on the oxidative regioselectivity, cellulose-active LPMOs are further divided into three types: C1 oxidizing LPMOs, C4 oxidizing LPMOs, and mixture C1/C4 oxidizing LPMOs (Vu et al., 2014; Zhou & Zhu, 2020).
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These authors contributed equally to this work.