Research article
BeeToxAI: An artificial intelligence-based web app to assess acute toxicity of chemicals to honey bees

https://doi.org/10.1016/j.ailsci.2021.100013Get rights and content
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Abstract

Chemically induced toxicity is the leading cause of recent extinction of honey bees. In this regard, we developed an innovative artificial intelligence-based web app (BeeToxAI) for assessing the acute toxicity of chemicals to Apis mellifera. Initially, we developed and externally validated QSAR models for classification (external set accuracy ∼91%) through the combination of Random Forest and molecular fingerprints to predict the potential for chemicals to cause acute contact toxicity and acute oral toxicity to honey bees. Then, we developed and externally validated regression QSAR models (R2 = 0.75) using Feedforward Neural Networks (FNNs). Afterward, the best models were implemented in the publicly available BeeToxAI web app (http://beetoxai.labmol.com.br/). The outputs of BeeToxAI are: toxicity predictions with estimated confidence, applicability domain estimation, and color-coded maps of relative structure fragment contributions to toxicity. As an additional assessment of BeeToxAI performance, we collected an external set of pesticides with known bee toxicity that were not included in our modeling dataset. BeeToxAI classification models were able to predict four out of five pesticides correctly. The acute contact toxicity model correctly predicted all of the eight pesticides. Here we demonstrate that BeeToxAI can be used as a rapid new approach methodology for predicting acute toxicity of chemicals in honey bees.

Keywords

Apis mellifera
Artificial intelligence
Pollinators
Ecotoxicology
Machine learning
Predictive modeling

Abbreviations

ACC
accuracy
AD
applicability domain
AUC
area under receiver operating characteristic curve, Ds, Dice similarity
DT
applicability domain threshold
κ
Cohen's kappa
LD50
median lethal dose that induces death in 50% of the population
MACCS
Molecular ACCess System
MCC
Matthews correlation coefficient
ML
machine learning
NPV
negative predictive value
OCHEM
Online Chemical Modeling Environment
OECD
Organization for Economic Cooperation and Development PPV, positive predictive value
QSAR
Quantitative StructureToxicity/Activity Relationship
RF
Random Forest
SE
sensitivity
SMILES
Simplified Molecular Input Line Entry Specification SP, specificity
SVM
Support Vector Machines
Tc
Tanimoto coefficient
US EPA
United States Environmental Protection Agency's
5FCV
5-fold cross-validation

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These authors contributed equally to this work.