Deep Sea Research Part II: Topical Studies in Oceanography
A deterministic model for N2 fixation at stn. ALOHA in the subtropical North Pacific Ocean
Introduction
The importance of marine N2 fixation by diazotrophic phytoplankton in the present ocean has been stressed in several recent studies (Carpenter and Romans, 1991; Capone et al., 1997; Falkowski, 1997; Karl et al., 1997; Capone and Carpenter, 1999; Karl et al., 2001a). N2 fixation by Trichodesmium, which is dominant diazotroph in tropical and subtropical waters, yields an important input into the global nitrogen cycle (Capone et al., 1997), as it supplies a significant fraction of new nitrogen in the subtropical Pacific (Karl et al., 1997), the tropical North Atlantic (Carpenter and Romans, 1991), and the Arabian Sea (Capone et al., 1998). Furthermore, the aperiodic appearance of large Trichodesmium blooms observed during the Hawaii ocean time-series (HOT) program has been recognized as an important source of biogeochemical variability in the subtropical Pacific. The massive occurrence of Trichodesmium changed the elemental composition of organic matter pools (Karl et al., 1992) and potentially switches the system from a nitrogen to a phosphorus limited state (Karl et al., 1997). The admitted importance of marine N2 fixation has prompted speculation about its effect on the oceanic draw-down of atmospheric CO2 by altering the export of carbon from surface waters (Hood et al., 2000).
N2 fixation acts as a negative feedback mechanism in the global nitrogen cycle and might directly affect the partitioning of carbon between the atmosphere and the ocean (Falkowski, 1997). On long time scales of thousands of years, N2 fixation, which is selected for by low N : P ratios and repressed by high N : P ratios, represents a mechanism to constrain ecological stoichiometry close to the Redfield ratio (Lenton and Watson, 2000). In the present ocean, phosphate is available in slight excess relative to nitrate (Tyrrell, 1999) and N2 fixation represents a net source of fixed nitrogen in the global nitrogen cycle. N2 fixation in turn is controlled by the available phosphorus, iron (a requirement for the enzyme nitrogenase), and oxygen (a potent inhibitor of nitrogenase). This input of new nitrogen drives the biological system from the current nitrogen limitation towards limitation by phosphorus, and potentially affects the magnitude of carbon sequestration from the atmosphere. Since on average only the biogenic material based on new nutrients can be exported from the upper ocean, the export of carbon by the biological pump depends directly on the supply of new nutrients.
Modeling efforts directed towards a better understanding of marine biogeochemical cycles and their response to anthropogenic perturbations have increased considerably in recent years. However, the achievement of long-term goals, like the prediction of carbon sequestration from the atmosphere by the oceans, still requires substantial improvements of the currently available numerical models. One main task is the better representation of functional diversity and multi-elemental cycling to capture major shifts in biogeochemical mechanisms (Doney, 1999). N2 fixation is a key process that is not yet represented well in present models.
Here we present a simple model that explicitly describes the functional behavior of diazotrophs. The model includes the elemental cycling of nitrogen and phosphorus to allow a differentiation between nitrogen and phosphorus control and simulates the effect of N2 fixation on the N : P stoichiometry in the euphotic zone. The phytoplankton community is divided into two functional groups, diazotrophs represented by Trichodesmium and other phytoplankton, which are characterized by different stoichiometric ratios. This variable treatment of N : P stoichiometries leads to an uncoupling of the nitrogen and phosphorus cycles. The parameterization of N2 fixation is based on observed physiological responses of Trichodesmium to environmental conditions. Effects of temperature, irradiance, and wind speed are taken into account. The ecological model is coupled to a one-dimensional physical model of the upper water column at stn. ALOHA (22°45′N, 158°W) in the subtropical North Pacific Ocean. This site represents an excellent test case for a modeling study not only because a comprehensive set of physical and biological data are simultaneously collected during the HOT field program (Karl and Lukas, 1996), but also because dramatic changes in the microbial community structure, in particular massive blooms of Trichodesmium, occurred during the observational program. These blooms alter nutrient cycling mechanisms and stoichiometries of inorganic and organic matter pools (Karl et al., 1997). The present model is intended as a step towards a mechanistic simulation tool that allows a future assessment of the magnitude of marine N2 fixation and an exploration of hypotheses on the effect of N2 fixation on the sequestration of atmospheric CO2.
Section snippets
Previous approaches used to model N2 fixation
Parameterizations for the input of nitrogen into the oceanic system by N2 fixation have been employed previously by Bissett et al. (1999), Tyrrell (1999), Hood et al. (2001) and Neumann (2000). The model of Bissett et al. (1999) implicitly accounts for N2 fixation as a flux to the dissolved organic matter pool. The authors implemented a simple parameterization assuming a nitrogen source that is proportional to temperature and irradiance while diazotrophic biomass is not included explicitly. In
Model description
A coupled one-dimensional physical/biological model is presented that describes the input of new nitrogen into the biological system by N2 fixation. The model covers the euphotic and shallow subeuphotic zones of the upper water column (0–). The evolution of any biological scalar C is given bywhere the first term on the right-hand side accounts for vertical mixing, and the second term represents the biological “sources minus sinks” of the particular biological scalar
Discussion of the model results
The euphotic zone in the oligotrophic subtropical North Pacific Ocean is characterized by low nutrient concentrations and low standing stocks of living organisms. A deep chlorophyll maximum layer (DCML) persists between 100 and , while chlorophyll concentrations in the upper euphotic zone are low. The mixed-layer depth at stn. ALOHA varies seasonally between 30 and . As the nutricline is located below (Dore and Karl, 1996), the deep mixing events in winter usually do not reach the
Summary
We have presented a relatively simple biological model of an oligotrophic system that includes a mechanistically-based description of N2 fixation by diazotrophic phytoplankton and resolves the uncoupled elemental cycling of nitrogen and phosphorus in the euphotic zone. The mechanistic parameterization for N2 fixation is based on physiological responses of Trichodesmium to the physical conditions of their environment. This model is meant as a step towards a more realistic inclusion of the supply
Acknowledgements
We thank Jim Richman for helpful discussions and appreciate the thoughtful comments from Scott Doney, Keith Moore and 2 anonymous reviewers. This work has been supported by a grant from the National Aeronautics and Space Administration (NAG5-4947). US JGOFS contribution No. 617.
References (61)
- et al.
Carbon cycling in the upper waters of the Sargasso Sea: I. Numerical simulation of differential carbon and nitrogen fluxes
Deep-Sea Research I
(1999) Calculating solar radiation for ecological studies
Ecological Modelling
(1981)- et al.
A new coupled, one-dimensional model for the upper ocean: applications to the JGOFS Bermuda Atlantic Time-series Study (BATS) site
Deep-Sea Research II
(1996) - et al.
Nitrite distributions and dynamics at Station ALOHA
Deep-Sea Research II
(1996) - et al.
Testing a marine ecosystem model: sensitivity analysis and parameter optimization
Journal of Marine Systems
(2001) - et al.
Modeling the effect of nitrogen fixation on carbon and nitrogen fluxes at BATS
Deep-Sea Research II
(2001) - et al.
The Hawaii Ocean Time-series (HOT) program: background, rationale and field implementation
Deep-Sea Research II
(1996) - et al.
Seasonal and interannual variability in primary production and particle flux at Station ALOHA
Deep-Sea Research II
(1996) - et al.
Ecological nitrogen-to-phosphorus stoichiometry at station ALOHA
Deep-Sea Research II
(2001) - et al.
Seasonal and interannual variations in photosynthetic carbon assimilation at station ALOHA
Deep-Sea Research II
(1996)
Towards a 3D-ecosystem model of the Baltic Sea
Journal of Marine Systems
A seasonal study of the significance of N2 fixation by Trichodesmium spp. at the Bermuda Atlantic Time-series Study (BATS) site
Deep-Sea Research II
Configuring an ecosystem model using data from the Bermuda-Atlantic Time Series (BATS)
Deep-Sea Research II
Microbial control of oceanic carbon flux: the plot thickens
Science
Nitrogen fixation in Oscillatoria (Trichodesmium) erythraea in relation to bundle formation and trichome differentiation
Marine Biology
Trichodesmium, a globally significant marine cyanobacterium
Science
An extensive bloom of the N2-fixing cyanobacterium Trichodesmium erythraeum in the central Arabian Sea
Marine Ecology Progress Series
Physiology and ecology of marine planktonic Oscillatoria (Trichodesmium)
Marine Biology Letters
Nitrogen fixation in Trichodesmium blooms
Nitrogen fixation, disruption, and production of Oscillatoria (Trichodesmium) spp. in the western Sargasso and Caribbean Seas
Limnology and Oceanography
Major role of the cyanobacterium Trichodesmium in nutrient cycling in the North Atlantic Ocean
Science
Validity of N2 fixation rate measurements in marine Oscillatoria (Trichodesmium)
Journal of Plankton Research
Vertical fluxes of carbon, nitrogen and phosphorus in the North Pacific subtropical gyre
Journal of Geophysical Research
Major challenges confronting marine biogeochemical modeling
Global Biogeochemical Cycles
A model of annual plankton cycles
Biological Oceanography
A nitrogen-based model of plankton dynamics in the oceanic mixed-layer
Journal of Marine Research
Evolution of the nitrogen cycle and its influence on the biological sequestration of CO2 in the ocean
Nature
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