Molecular Cell
Volume 11, Issue 5, May 2003, Pages 1291-1299
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Article
Transcription of Leishmania major Friedlin Chromosome 1 Initiates in Both Directions within a Single Region

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Abstract

Almost nothing is known about the sequences involved in transcription initiation of protein-coding genes in the parasite Leishmania. We describe here the transcriptional analysis of chromosome 1 (chr1) from Leishmania major Friedlin (LmjF) which encodes the first 29 genes on one DNA strand, and the remaining 50 on the opposite strand. Strand-specific nuclear run-on assays showed that a low level of nonspecific transcription probably takes place over the entire chromosome, but an ∼10-fold higher level of coding strand-specific RNA polymerase II (Pol II)-mediated transcription initiates within the strand-switch region. 5′ RACE studies localized the initiation sites to a <100 bp region. Transfection studies support the presence of a bidirectional promoter within the strand-switch region, but suggest that other factors are also involved in Pol II transcription. Thus, while in most eukaryotes each gene possesses its own promoter, a single region seems to drive the expression of the entire chr1 in LmjF.

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Present address: Department of Pathology, Dartmouth-Hitchcock Medical Center, Lebanon, New Hampshire 03756.

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Present address: University of California, San Francisco, P.O. Box 0546, HSW 1475, 513 Parnassus Avenue, San Francisco, California 94143.