Elsevier

NeuroImage

Volume 54, Issue 3, 1 February 2011, Pages 2132-2137
NeuroImage

ZNF804A risk allele is associated with relatively intact gray matter volume in patients with schizophrenia

https://doi.org/10.1016/j.neuroimage.2010.09.089Get rights and content

Abstract

ZNF804A rs1344706 is the first genetic risk variant to achieve genome wide significance for psychosis. Following earlier evidence that patients carrying the ZNF804A risk allele had relatively spared memory function compared to patient non-carriers, we investigated whether ZNF804A was also associated with variation in brain volume. In a sample of 70 patients and 38 healthy participants we used voxel based morphometry to compare homozygous (AA) carriers of the ZNF804A risk allele to heterozygous and homozygous (AC/CC) non-carriers for both whole brain volume and specific regions implicated in earlier ZNF804A studies—the dorsolateral pre-frontal cortex, the hippocampus, and the amygdala. For patients, but not for controls, we found that homozygous ‘AA’ risk carriers had relatively larger gray matter volumes than heterozygous/homozygous non-carriers (AC/CC), particularly for hippocampal volumes. These data are consistent with our earlier behavioral data and suggest that ZNF804A is delineating a schizophrenia subtype characterized by relatively intact brain volume. Establishing if this represents a discrete molecular pathogenesis with consequences for nosology and treatment will be an important next step in understanding ZNF084A's role in illness risk.

Research Highlights

►ZNF804A rs1344706 is the first genetic risk variant to achieve genome wide significance for psychosis. ►We show that patients who are homozygous carriers of the ZNF804A risk allele show relatively larger grey matter volumes, particularly for hippocampal volumes. ►This evidence is consistent with earlier evidence that for patients, but not controls, ZNF804A risk carriers showed relatively unimpaired cognitive performance than non-carriers—particularly on measures of memory function. ►This study supports the hypothesis that ZNF804A is associated with a schizophrenia phenotype characterized by relatively less impaired brain structure and function, particularly for memory related brain structures.

Introduction

A single nucleotide polymorphism rs1344706 located at gene ZNF804A (OMIM: 612282) was the first genetic variant to achieve genome wide significance for psychosis (9.96X10-9 (OR 1.12)) (O'Donovan et al., 2008a, O'Donovan et al., 2008b). Despite being relatively under-powered to replicate such a modest effect, two of three recently reported large SZ GWAS studies (Purcell et al., 2009, Sullivan et al., 2008) and a discrete replication study by Riley et al. (2009) supported association between the same risk allele and increased SZ risk. Copy number variation at this locus has also been identified for psychosis (Steinberg et al., 2010). The protein encoded by ZNF804A is uncharacterized, but given its zinc finger domain, is likely to have a role in regulating gene expression. The mouse orthologue Zfp804A is widely expressed in the brain (Allen brain atlas (http://www.brain-map.org/); known binding partners include ataxin-1, encoded by ATXN1 (OMIM: 601556).

Changes in cognitive function and brain structure are strongly associated with SZ and are predictive of level of disability (Green et al., 2004, Toulopoulou et al., 2007). Investigating the functional contribution of individual SZ risk variants to these changes has the unique advantage of enabling in vivo investigation of candidate genes at the level of brain and behavior. The utility of this approach has been demonstrated by findings with existing candidate genes for schizophrenia (including DISC1, NRG1, DTNBP1, DAOA (G72), RGS4; discussed in O'Donovan et al., 2008a, O'Donovan et al., 2008b). Recently, Esslinger et al. (2009) reported that the ZNF804A risk ‘A’ allele was associated with altered connectivity in the dorsolateral pre-frontal cortex (DLPFC) and the hippocampus. They found that connectivity between the hippocampus and DLPFC was increased in risk carriers, while connectivity between contralateral DLPFC regions and within the right DLPFC was reduced. The authors speculated the reduced connectivity in DLPFC may be a contributory factor in disturbed executive function, whereas the increased connectivity between DLPFC and hippocampus might lead to a disruption of interactions between prefrontal and limbic cortices. However, it is pertinent to note that this study only included healthy controls and no cognitive correlations with these connectivity effects were observed. A recent study by our group, involving both patients and healthy participants, suggested an alternative explanation. We found that the risk allele at ZNF804A was associated with relatively spared cognitive ability in the domains of working and episodic memory in independent samples of Irish and German patients with SZ but not controls (Walters et al., 2010). Of note, these cognitive abilities involve two of the three brain regions—the dorsolateral prefrontal cortex and hippocampus—associated with ZNF804A in the Esslinger study (Smith and Jonides, 1999, Squire et al., 2004). We further demonstrated that the association between ZNF804A and SZ increased when patients with IQs lower than 90 were excluded from the analysis. Collectively, these results suggest that ZNF804A is not associated with cognitive impairments, and appears instead to delineate an illness subtype in which cognitive deficits are not a strong feature.

Cognitive deficits have been repeatedly correlated with reduced gray matter volume in SZ (Hulshoff Pol et al., 2006). Based on our earlier cognitive study we predicted that ZNF804A risk A allele carriers would show relatively larger gray matter volumes than non-carriers either at the whole brain level or in a planned region of interest analyses of brain regions implicated by Esslinger et al. (2009) (the dorsolateral prefrontal cortex (DLPFC), the hippocampus, and the amygdala), and our behavioral study (the DLPFC and hippocampus). Avoiding sample bias, we undertook this study in a relatively large sample of patients who were independent of the sample included in our original cognitive analysis.

Section snippets

Participants

All participants gave written informed consent for this study, in accordance with local ethics committee guidelines. Structural magnetic resonance imaging (MRI) was conducted and samples for genotyping were acquired from 82 patients and 39 controls. Twelve patients and one control participant were subsequently excluded from data analysis because of issues relating the scan quality (e.g. head motion) or genotyping (e.g. insufficient DNA volumes), resulting in a final sample of 70 patients and 38

Main effect of participant group

Significant reductions in GM volume were noted in patients, compared to controls, in a number of regions including superior and middle temporal and middle and medial superior frontal gyri, inferior parietal lobes, insula, thalamus and cingulate gyrus (see Supplemental Fig. S1 and Supplemental Table S1 for an abbreviated list of regions that survived correction for multiple comparisons at the whole-brain level). While a number of regions of white matter demonstrated a similar main effect of

Discussion

The rs1344706 risk ‘A’ allele located within ZNF804A, the first variant showing genome wide evidence of association with psychosis, has previously been associated with altered connectivity between brain regions including the DLPFC, hippocampus and amygdala in healthy controls (Esslinger et al., 2009), and with relatively fewer cognitive impairments in episodic and working memory function in patients (Walters et al., 2010). In the present study a priori ROI analysis found that the same variant

Conclusions

SZ is a heterogeneous disorder, not just in terms of clinical symptomatology, but also in level of cognitive disability. It is probable therefore that not all genetic risk factors increase illness liability via a deleterious impact either on cognitive function or the brain structures serving these functions. Together with previously reported neuropsychological data from our group, this study suggests that ZNF804A may be delineating an illness subtype characterized by relatively intact memory

References (22)

  • M.C. O'Donovan et al.

    Identification of loci associated with schizophrenia by genome-wide association and follow-up

    Nat. Genet.

    (2008)
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      This association has since been replicated and shown to be one of the strongest susceptibility variants for schizophrenia (Pardiñas et al., 2018; Riley et al., 2010; Williams et al., 2011). Rs1344706-A has been associated with decreased expression of ZNF804A in fetal brain tissue (Hill and Bray, 2012) and with neurocognitive and brain structural variations in schizophrenia patients and in healthy controls (Chang et al., 2017; Donohoe et al., 2011; Nenadic et al., 2015). Two recent studies linked ZNF804A rs1344706 with schizotypy (Stefanis et al., 2013; Yasuda et al., 2011), but with heterogeneous dimensional associations: While Yasuda and colleagues found carriers of the rs1344706 major A-allele to have higher disorganised schizotypal levels, Stefanis et al. reported the opposite effect, i.e., a positive association of the minor C-allele with positive schizotypy, calling for further research.

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      In contrast, SBM uses independent component analysis (ICA) to determine patterns of co-variation in grey matter concentration (GMC) among brain regions (Xu et al., 2009), and can be used to examine differences in patterns of grey matter anomalies among correlated sets of brain regions, in schizophrenia compared to healthy individuals (Castro et al., 2014; Gupta et al., 2015; Kasparek et al., 2010; Kubera et al., 2014; Palaniyappan et al., 2015; Turner et al., 2012; Xu et al., 2009). The aim of this study was thus to (a) replicate previous evidence of association between rs1344706 variation and grey matter volume (Donohoe et al., 2011; Nenadic et al., 2015) and thickness (Schultz et al., 2014) in large samples of schizophrenia and healthy individuals, and (b) extend this work to determine genetic associations with spatially-dependent, correlated grey matter concentration in the brain. We expected to replicate the VBM pattern of results in schizophrenia reported by Nenadic et al. (Nenadic et al., 2015), showing increased grey matter in frontal (OFC) and temporal regions for AA homozygotes relative to AC heterozygotes; whereas, in healthy controls we expected to see decreased grey matter in these regions for AA homozygotes relative to AC heterozygotes (Nenadic et al., 2015).

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    Both authors contributed equally to this work.

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