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First fully sequenced genome of an Australian isolate of Cauliflower mosaic virus

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Abstract

We report the first fully sequenced genome of an Australian isolate of Cauliflower mosaic virus. The circular genome is 8022 base pairs in length. A phylogenetic analysis suggests recent common ancestry of this virus isolate with those from Japan and the USA, and origins of the clade in western Europe.

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References

  • Coutts BA, Jones RAC (2000) Viruses infecting canola (Bassica napus) in south-west Australia: incidence, distribution, spread, and infection reservoir in wild radish (Raphanus raphinistrum). Aust J Agric Res 51:925–936

    Article  Google Scholar 

  • Day MF, Venables DG (1960) Purification of Cauliflower mosaic virus. Virology 11:502–505

    Article  CAS  PubMed  Google Scholar 

  • Day M, Venables D (1961) The transmission of Cauliflower mosaic virus by aphids. Aust J Biol Sci 14:187–197

    Article  Google Scholar 

  • Geering ADW (2014) Caulimoviridae (Plant Pararetroviruses). In: eLS Wiley https://doi.org/10.1002/9780470015902.a0000746.pub3

  • Geering ADW, Hull R (2012) Caulimoviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ (eds) Virus Taxonomy. Elsevier, Oxford

    Google Scholar 

  • Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, Gascuel O (2010) New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59:307–321

    Article  CAS  PubMed  Google Scholar 

  • Hertel K, Schwinghamer M, Bambach R (2004) Virus diseases in canola and mustard. In: Industries, N.D.o.P. (ed) Agnote DPI 495

  • Moyle R, Pretorius L, Dalton-Morgan J, Persley D, Schenk P (2016) Analysis of the first complete genome sequence of an Australian Tomato spotted wilt virus isolate. Australas Plant Pathol 45(5):509–512

    Article  CAS  Google Scholar 

  • Pretorius L, Moyle RL, Dalton-Morgan J, Hussein N, Schenk PM (2016) Complete nucleotide sequence of an Australian isolate of Turnip mosaic virus before and after seven years of serial passaging. Genome Announcements 4:e01269–e01216

    Article  PubMed  PubMed Central  Google Scholar 

  • Pretorius L, Moyle R, Hussein N, Al-Amery A, Schenk P (2017) Natural and Engineered defenses against plant viruses Curr Biotechnol 6. https://doi.org/10.2174/2213529403666170310143841

  • Qiu SG, Schoelz JE (1992) Three regions of Cauliflower mosaic virus strain W260 are involved in systemic infection of solanaceous hosts. Virology 190:773–782

    Article  CAS  PubMed  Google Scholar 

  • Randles JW, Crowley NC (1967) Epidemiology of Cauliflower mosaic virus in South Australia. Aust J Agric Res 18:289–298

    Article  Google Scholar 

  • Ryabova LA, Pooggin MM, Hohn T (2006) Translation reinitiation and leaky scanning in plant viruses. Virus Res 119:52–62

    Article  CAS  PubMed  Google Scholar 

  • Yasaka R et al (2014) The temporal evolution and global spread of Cauliflower mosaic virus, a plant pararetrovirus. PLoS One 9:e85641

    Article  PubMed  PubMed Central  Google Scholar 

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Funding

This study was funded by the Australian Research Council (Discovery Project grant number DP140103363).

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Authors and Affiliations

  1. School of Agriculture and Food Sciences, The University of Queensland, St Lucia, QLD, 4072, Australia

    Lara Pretorius, Richard L. Moyle, Jessica Dalton-Morgan & Peer M. Schenk

  2. School of Environmental and Rural Science, University of New England, Armidale, NSW, 2351, Australia

    Mark W. Schwinghamer

  3. Department of Agriculture and Fisheries, Ecosciences Precinct, 41 Boggo Road, Dutton Park, QLD, 4102, Australia

    Kathy Crew

  4. Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St Lucia, QLD, 4072, Australia

    Andrew D. W. Geering

Authors
  1. Lara Pretorius
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  2. Richard L. Moyle
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  3. Jessica Dalton-Morgan
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  4. Mark W. Schwinghamer
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  5. Kathy Crew
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  6. Peer M. Schenk
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  7. Andrew D. W. Geering
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Corresponding author

Correspondence to Andrew D. W. Geering.

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Conflict of interest

The authors declare no conflict of interest.

Additional information

Mark W. Schwinghamer is deceased.

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Pretorius, L., Moyle, R.L., Dalton-Morgan, J. et al. First fully sequenced genome of an Australian isolate of Cauliflower mosaic virus . Australasian Plant Pathol. 46, 597–599 (2017). https://doi.org/10.1007/s13313-017-0520-1

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  • DOI: https://doi.org/10.1007/s13313-017-0520-1

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