Skip to main content
Log in

Screening, purification, and characterization of an extracellular prolyl oligopeptidase from Coprinopsis clastophylla

  • Published:
Journal of Microbiology Aims and scope Submit manuscript

Abstract

Culture filtrates of 22 mushrooms were screened for extracellular prolyl oligopeptidase activity. Four strains with relatively high enzyme activity were all from inky cap mushrooms. The production of Coprinopsis clastophylla prolyl oligopeptidase was associated with the growth of the fungus and the enzyme was not released by cell lysis. The enzyme was purified 285-fold to a specific activity of 52.05 U/mg. It was purified to a single band on a native polyacrylamide gel. However, the enzyme separated into three bands on a sodium dodecyl sulfate-polyacrylamide gel with mobility corresponding to molecular weights of approximately 84, 60, and 26 kDa. The results of tandem mass spectrometric analysis revealed that the 60 kDa protein was likely a degradation product of the 84 kDa protein. The isoelectric point of the purified enzyme was 5.2. The purified enzyme had an optimal pH and temperature of 8.0 and 37°C, respectively. Diisopropyl fluorophosphate (DFP), p-chloromercuribenzoaic acid (PCMB), Hg2+, and Cu2+ strongly inhibited C. clastophylla prolyl oligopeptidase. This enzyme is a serine peptidase and one or more cysteine residues of the enzyme are close to the active site.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Berdal, B.P., Bøvre, K., Olsvik, O., and Omland, T. 1983. Patterns of extracellular proline-specific endopeptidases in Legionella and Flavobacterium spp. demonstrated by use of chromogenic peptides. J. Clin. Microbiol. 17, 970–974.

    PubMed  CAS  Google Scholar 

  • Brisson, N., Giroux, H., Zollinger, M., Camirand, A., and Simard, C. 1989. Maturation and subcellular compartmentation of potato starch phosphorylase. Plant Cell 1, 559–566.

    PubMed  CAS  Google Scholar 

  • Chen, H.M., Chang, S.C., Wu, C.C., Cuo, T.S., Wu, J.S., and Juang, R.H. 2002. Regulation of the catalytic behaviour of L-form starch phosphorylase from sweet potato roots by proteolysis. Physiol. Plant 114, 506–515.

    Article  PubMed  CAS  Google Scholar 

  • Cowell, J.L., Hewlett, E.L., and Manclark, C.R. 1979. Intracellular localization of the dermonecrotic toxin of Bordetella pertussis. Infect. Immun. 25, 896–901.

    PubMed  CAS  Google Scholar 

  • Estera, S.D., Rasmussen, J., Meldal, M., and Breddam, K. 1992. Proline-specific endopeptidases from microbial sources isolation of an enzyme from a Xanthomonas sp. J. Bacteriol. 174, 2454–2459.

    Google Scholar 

  • Fülöp, V., Böcskei, Z., and Polgár, L. 1998. Prolyl oligopeptidase: an unusual beta-propeller domain regulates proteolysis. Cell 94, 161–170.

    Article  PubMed  Google Scholar 

  • Gass, J., Ehren, J., Strohmeier, G., Isaacs, I., and Khosla, C. 2005. Fermentation, purification, formulation, and pharmacological evaluation of a prolyl endopeptidase from Myxococcus xanthus: implications for Celiac Sprue therapy. Biotechnol. Bioeng. 92, 674–684.

    Article  PubMed  CAS  Google Scholar 

  • Gass, J. and Khosla, C. 2007. Prolyl endopeptidases. Mol. Life Sci. 64, 345–355.

    Article  CAS  Google Scholar 

  • Goossens, F., Meester, I. De, Vanhoof, G., Hendriks, D., Vriend, G., and Scharpe, S. 1995. The purification, characterization and analysis of primary and secondary-structure of prolyl oligopeptidase from human lymphocytes evidence that the enzyme belongs to the alpha/ beta hydrolase fold family. Eur. J. Biochem. 233, 432–441.

    Article  PubMed  CAS  Google Scholar 

  • Green, D.E., Leloir, L.F., and Nocito, V. 1945. Trasaminases. J. Biol. Chem. 161, 559–582.

    PubMed  CAS  Google Scholar 

  • Habibi-Najafi, M.B. and Lee, B.H. 1994. Proline-specific peptidases of Lactobacillus casei subspecies. J. Dairy Sci. 77, 385–392.

    Article  PubMed  CAS  Google Scholar 

  • Harris, M.N., Madura, J.D., Ming, L.J., and Harwood, V.J. 2001. Kinetic and mechanistic studies of prolyl oligopeptidase from the hyperthermophile Pyrococcus furiosus. J. Biol. Chem. 276, 19310–19317.

    Article  PubMed  CAS  Google Scholar 

  • Heinis, C., Alessi, P., and Neri, D. 2004. Engineering a thermostable human prolyl endopeptidase for antibody-directed enzyme prodrug therapy. Biochemistry 43, 6293–6303.

    Article  PubMed  CAS  Google Scholar 

  • Hopple, J.S. and Vilgalys, R. 1994. Phylogenetic relationships in the mushroom genus Coprinus and dark-spored allies based on sequence data from the nuclear gene coding for the large ribosomal subunit RNA: divergent domains, outgroups, and monophyly. Mol. Phylogenet. Evol. 13, 1–19.

    Article  Google Scholar 

  • Iwata, S. and Fukui, T. 1973. The subunit structure of α-glucan phosphorylase from potato. FEBS Lett. 36, 222–226.

    Article  PubMed  CAS  Google Scholar 

  • Kanatani, A., Yoshimoto, T., Kitazono, A., Kokubo, T., and Tsuru, D. 1993. Prolyl endopeptidase from Aeromonas hydrophila: cloninig, sequencing, and expression of the enzyme gene, and characterization of the expressed enzyme. J. Biochem. 113, 790–796.

    PubMed  CAS  Google Scholar 

  • Koida, M. and Walter, R. 1976. Post-proline cleaving enzyme. J. Biol. Chem. 251, 7593–7599.

    PubMed  CAS  Google Scholar 

  • Krishnamurti, M., Carvalho, K., and Camargo, A.C.M. 1981. Purification of rabbit brain endooligopeptidase and preparation of anti-enzyme antibodies. Biochemistry 20, 7082–7088.

    Article  Google Scholar 

  • Laemmli, U.K. 1970. Cleavage of structural protein during the assembly of the head of bacteriophage T4. Nature 227, 680–685.

    Article  PubMed  CAS  Google Scholar 

  • Lee, H.S., Kim, Y.J., Cho, Y., and Kim, S.J. 2007. Characterization of prolyl oligopeptidase from hyperthermophilic archaeon Thermococcus sp. NA1. J. Biosci. Bioeng. 103, 221–228.

    Article  PubMed  CAS  Google Scholar 

  • Makinen, P.L., Makinen, K.K., and Syed, S.A. 1994. An endo-acting proline-specific oligopeptidase from Treponema denticola ATCC 35405: evidence of hydrolysis of human bioactive peptides. Infect. Immun. 62, 4938–4947.

    PubMed  CAS  Google Scholar 

  • Marti, T., Molberg, O., Li, Q., Gray, G.M., Khosla, C., and Sollid, L.M. 2005. Prolyl endopeptidase-mediated destruction of T cell epitopes in whole gluten: chemical and immunological characterization. J. Pharmacol. Exp. Ther. 312, 19–26.

    Article  PubMed  CAS  Google Scholar 

  • Moriyama, A., Nakanishi, M., and Saaki, M. 1988. Porcine muscle prolyl endopeptidase and its endopeptidase. J. Biochem. 104, 112–117.

    PubMed  CAS  Google Scholar 

  • Muraguchi, H., Fujita, T., Kishibe, Y., Konno, K., Nakahori, N., Ueda, K., Yanagi, S.O., and Kamada, T. 2008. The exp1 gene essential for pileus expansion and autolysis of the inky cap mushroom Coprinopsis cinerea (Coprinus cinereus) encodes an HMG protein. Fungal Genet. Biol. 45, 890–896.

    Article  PubMed  CAS  Google Scholar 

  • Ohtsuki, S., Homma, K., Kurata, S., Komano, H., and Natori, S. 1994. A prolyl endopeptidase of Sarcophaga peregrina (Flesh Fly): its purification and suggestion for its participation in the differentiation of the imaginal discs. J. Biochem. 115, 449–453.

    PubMed  CAS  Google Scholar 

  • Polgar, L. 1991. pH-dependent mechanism in the catalysis of prolyl endopeptidase from pig muscle. Eur. J. Biochem. 197, 441–447.

    Article  PubMed  CAS  Google Scholar 

  • Polgar, L. 1992. Prolyl endopeptidase catalysis. A physical rather than a chemical step is rate-limiting. Biochem. J. 283, 647–648.

    PubMed  CAS  Google Scholar 

  • Powers, J.C. and Wilcox, P.E. 1970. Design and synthesis of inhibitors for crystallographic studies on the active site of chymotrypsin. J. Am. Chem. Soc. 92, 1782–1783.

    Article  PubMed  CAS  Google Scholar 

  • Pyle, G.G., Paaso, B., Anderson, B.E., Allen, D.D., Marti, T., Li, Q., Siegel, M., Khosla, C., and Gray, G.M. 2005. Effect of pretreatment of food gluten with prolyl endopeptidase on gluten-induced malabsorption in celiac sprue. Clin. Gastroenterol. Hepatol. 3, 687–694.

    Article  PubMed  CAS  Google Scholar 

  • Rathore, R.S., Garg, N., Garg, S., and Kumar, A. 2009. Starch phosphorylase: role in starch metabolism and biotechnological appli cations. Crit. Rev. Biotechnol. 29, 214–224.

    Article  PubMed  CAS  Google Scholar 

  • Rea, D. and Fülöp, V. 2006. Structure-function properties of prolyl oligopeptidase family enzymes. Cell Biochem. Biophys. 44, 349–365

    Article  PubMed  CAS  Google Scholar 

  • Rennex, D., Hemmings, B.A., Hofsteenge, J., and Stone, S.R. 1991. cDNA cloning of porcine brain prolyl endopeptidase and identification of the active-site seryl residue. Biochemistry 30, 2195–2203.

    Article  PubMed  CAS  Google Scholar 

  • Saito, Y., Ohura, S., Kawato, A., and Suginami, K. 1997. Prolyl endopeptidase inhibitors in sake and its byproducts. J. Agric. Food Chem. 45, 720–724.

    Article  CAS  Google Scholar 

  • Sattar, A.K.M.A., Yamamoto, N., Yoshimoto, T., and Tsuru, D. 1990. Purification and characterization of an extracellular prolyl endopeptidase from Agaricus bisporus. J. Biochem. 107, 256–261.

    PubMed  CAS  Google Scholar 

  • Shan, L., Mathews, I.I., and Khosla, C. 2005. Structual and mechanistic analysis of two prolyl endopeptidases: role of interdomain dynamics in catalysis and specificity. Proc. Natl. Acad. Sci. USA 102, 3599–3604.

    Article  PubMed  CAS  Google Scholar 

  • Szeltner, Z. and Polgár, L. 2008. Structure, function and biological relevance of prolyl oligopeptidase. Curr. Protein Pept. Sci. 9, 96–107.

    Article  PubMed  CAS  Google Scholar 

  • Szwajcer-Dey, E., Rasmussen, J., Meldal, M., and Breddam, K. 1992. Proline-specific endopeptidases from microbial sources: isolation of enzyme from a Xanthomonas sp. J. Baceteriol. 174, 2454–2459.

    CAS  Google Scholar 

  • Walter, R., Shlank, H., Glass, D., Schwarz, I., and Kerenyi, T. 1971. Leucylglycinamide release from oxytocin by human uterine enzyme. Science 173, 827–829.

    Article  PubMed  CAS  Google Scholar 

  • Walter, R. and Yoshimoto, T. 1978. Postproline cleaving enzyme: kinetic studies of size and stereospecificity of its active site. J. Am. Chem. Soc. 17, 4139–4144.

    CAS  Google Scholar 

  • Wilm, M., Shevchenko, A., Houthaeve, T., Breit, S., Schweigerer, L., Fotsis, T., and Mann, M. 1996. Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospreay mass spectrometry. Nature 379, 466–479.

    Article  PubMed  CAS  Google Scholar 

  • Xiu, Z., Li, M., Zhou, S., Dou, H., Zhou, H., and Chen, C. 2002. A new method for the preparation of human parathyroid hormone 1-34 peptides. Biotechnol. Appl. Biochem. 36, 111–117.

    Article  PubMed  CAS  Google Scholar 

  • Yoshimoto, T., Oyama, H., Koriyama, N., and Tsuru, D. 1988a. Prolyl endopeptidase from bovine testis: purification, characterization and comparison with the enzymes from other tissues. Chem. Pharm. Bull. 36, 1456–1462.

    Article  PubMed  CAS  Google Scholar 

  • Yoshimoto, T., Sattar, A.K.M.A., Hirose, W., and Tsuru, D. 1987. Studies on prolyl endopeptidase from carrot (Daucus carota): purification and enzymatic properties. Biochem. Biophys. Acta 916, 29–37.

    Article  CAS  Google Scholar 

  • Yoshimoto, T., Sattar, A.K.M.A., Hirose, W., and Tsuru, D. 1988b. Studies on prolyl endopeptidase from shakashimeji (Lyophyllum cinerascens): purification and enzymatic properties. J. Biochem. 104, 622–627.

    PubMed  CAS  Google Scholar 

  • Yoshimoto, T. and Tsuru, D. 1978. Proline specific endopeptidase from Flavobacterium. Agric. Biol. Chem. 42, 2417–2419.

    Article  CAS  Google Scholar 

  • Yoshimoto, T., Walter, R., and Tsuru, D. 1980. Proline-specific endopeptidase from Flavobacterium. J. Biol. Chem. 255, 4786–4792.

    PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Wen-Shen Chu.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Chen, JT., Chao, ML., Wen, CY. et al. Screening, purification, and characterization of an extracellular prolyl oligopeptidase from Coprinopsis clastophylla . J Microbiol. 50, 652–659 (2012). https://doi.org/10.1007/s12275-012-2099-0

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12275-012-2099-0

Keywords

Navigation