Skip to main content
Log in

Design, synthesis and computational validation of novel benzimidazole/indole-based PPARα and PPARγ partial agonists

  • Published:
Journal of Chemical Sciences Aims and scope Submit manuscript

Abstract

The design and synthesis of benzimidazolyl and indolyl linked α-alkoxy phenylpropanoic acid derivatives and the β-keto ester analogues in an effort to develop novel peroxisome proliferator activated receptors ligands expected to exhibit PPARα and PPARγ partial agonism in the management of hyperglycemia and hyperlipidemia for the treatment of type 2 diabetes is reported. Computational validation of the designed molecules through activity prediction and docking studies showed expected results.

Syntheses of benzimidazole and indole linked benzyl based α-alkoxy propanoic acids and benzylidene and benzyl based β-ketoesters, as partial PPARα/γ agonists as Anti Type 2 Diabetic compounds, followed by their activity and binding affinity prediction at individual PPARs to support the design of the molecules with expected partial agonism, are reported.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Figure 1
Scheme 1
Scheme 2
Scheme 3
Scheme 4
Figure 2
Figure 3
Figure 4
Figure 5
Figure 6
Figure 7
Figure 8
Figure 9
Figure 10

References

  1. Ahmed I, Furlong K, Flood J, Treat P V and Goldstein J B 2007 Am. J. Ther. 14 49

    Article  Google Scholar 

  2. Balakumar P, Madhankumar R, Subrahmanya S G, Krishan P and Singh M 2007 Pharmacol. Res. 56 91

    Article  CAS  Google Scholar 

  3. Fiévet C, Fruchart J C and Staels B 2006 Curr. Opin. Pharmacol. 6 606

    Article  Google Scholar 

  4. Nissen S E, Wolski K and Topol E J 2005 JAMA 294 2581

    Article  CAS  Google Scholar 

  5. Hellmold H, Zhang H, Andersson U, Blomgren B, Holland T, Berg A, Elebring M, Sjögren N, Bamberg K, Dahl B, Westerberg R, Dillner B, Tugwood J, Roberts R, Lundholm E, Camejo G, Skånberg I and Evans J 2007 Toxicol. Sci. 98 63

    Article  CAS  Google Scholar 

  6. Haberman A B, Haberman Associates. The Biopharmaceutical Consortium, Sep 20, 2006

  7. Burgermeister E, Schnoebelen A, Flament A, Benz J, Stihle M, Gsell B, Rufer A, Ruf A, Kuhn B, Märki H P, Mizrahi J, Sebokova E, Niesor E and Meyer M 2006 Mol. Endocrinol. 20 809

    Article  CAS  Google Scholar 

  8. Fujimura T, Kimura C, Oe T, Takata Y, Sakuma H, Aramori I and Mutoh S 2006 J. Pharmacol. Exp. Ther. 318 863

    Article  CAS  Google Scholar 

  9. Verma R, Ghosh P, Kumar V and Wadhwa L K 2011 Med. Chem. Res. doi: 10.1007/s00044-011-9818-7

    Google Scholar 

  10. Cai Z, Feng J, Guo Y, Li P, Shen Z, Chu F and Guo Z 2006 Bioorg. Med. Chem. 14 866

    Article  CAS  Google Scholar 

  11. Kim N, Lee K, Koo B, Li F, Yoo J, Park H, Min K, Lim J, Kim M, Kim J and Suh Y 2007 Bioorg. Med. Chem. Lett. 17 3595

    Article  CAS  Google Scholar 

  12. Kuhn B, Hilpert H, Benz J, Binggeli A, Grether U, Humm R, Märki H, Meyer M and Mohr P 2006 Bioorg. Med. Chem. Lett. 14 4016

    Article  Google Scholar 

  13. Cronet P, Petersen J, Folmer R, Blomberg N, Sjöblom K, Karlsson U, Lindstedt E and Bamberg K 2001 Structure 9 699

    Article  CAS  Google Scholar 

  14. Shinkai H, Onogi S, Tanaka M, Shibata T, Iwao M, Wakitani K and Uchida I 1998 J. Med. Chem. 41 1927

    Article  CAS  Google Scholar 

  15. Lohray B B, Bhushan B, Rao B P, Madhavan G R, Murali N, Rao K N, Reddy A K and Rajesh B M 1998 J. Med. Chem. 41 1619

    Article  CAS  Google Scholar 

  16. Sybyl 7.3 (2006), 1699 Hanley Road, St. Louis, MO 63144, USA

  17. Suh Y, Kim N, Koo B, Lee K, Moon S, Shin D, Jung J, Paek S, Chang D, Li F, Hyun K, Ryu J and Hyun P 2008 J. Med. Chem. 51 6318

    Article  CAS  Google Scholar 

Download references

Acknowledgements

The authors are thankful to Head, Department of Chemistry, Punjabi University and are also grateful to the Director, Regional Sophisticated Instrumentation Centre (RSIC), Panjab University, Chandigarh and Director, National Institute of Pharmaceutical Education and Research (NIPER), SAS Nagar, Mohali, Punjab for extending the facilities for the analysis of various compounds reported in this paper. We greatly acknowledge the financial support from IndSwift Labs. Ltd., SAS Nagar, Mohali, Punjab for the ISLL-Punjabi University Collaborative Research Project, and providing the research fellowship to two of the authors VK and PG and for the timely guidance and support.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to RAMAN K VERMA.

Rights and permissions

Reprints and permissions

About this article

Cite this article

VERMA, R.K., GHOSH, P., KUMAR, V. et al. Design, synthesis and computational validation of novel benzimidazole/indole-based PPARα and PPARγ partial agonists. J Chem Sci 125, 1555–1571 (2013). https://doi.org/10.1007/s12039-013-0489-4

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12039-013-0489-4

Keywords

Navigation