Skip to main content
Log in

Genomic features for adaptation and evolutionary dynamics of four major Asian domestic carps

  • Letter to the Editor
  • Published:
Science China Life Sciences Aims and scope Submit manuscript

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

References

  • Ayala, F.J., and Coluzzi, M. (2005). Chromosome speciation: humans, Drosophila, and mosquitoes. Proc Natl Acad Sci USA 102, 6535–6542.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Barbera, J.P.M., Clements, M., Thomas, P., Rodriguez, T., Meloy, D., Kioussis, D., and Beddington, R.S.P. (2000). The homeobox gene Hex is required in definitive endodermal tissues for normal forebrain, liver and thyroid formation. Development 127, 2433–2445.

    Article  CAS  Google Scholar 

  • de Vos, J.M., Augustijnen, H., Bätscher, L., and Lucek, K. (2020). Speciation through chromosomal fusion and fission in Lepidoptera. Phil Trans R Soc B 375, 20190539.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Ferrero, D.M., Lemon, J.K., Fluegge, D., Pashkovski, S. L., Korzan, W.J., Datta, S.R., Spehr, M., Fendt, M., and Liberles, S.D. (2011). Detection and avoidance of a carnivore odor by prey. Proc Natl Acad Sci USA 108, 11235–11240.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Hämälä, T., Wafula, E.K., Guiltinan, M.J., Ralph, P.E., dePamphilis, C.W., and Tiffin, P. (2021). Genomic structural variants constrain and facilitate adaptation in natural populations of Theobroma cacao, the chocolate tree. Proc Natl Acad Sci USA 118, e2102914118.

    Article  PubMed  PubMed Central  Google Scholar 

  • Janišová, M., Skokanová, K., and Hlásny, T. (2018). Ecological differentiation, speciation, and rarity: how do they match in Tephroseris longifolia agg. (Asteraceae)? Ecol Evol 8, 2453–2470.

    Article  PubMed  PubMed Central  Google Scholar 

  • Li, A., Wang, J., Sun, K., Wang, S., Zhao, X., Wang, T., Xiong, L., Xu, W., Qiu, L., Shang, Y., et al. (2021). Two reference-quality sea snake genomes reveal their divergent evolution of adaptive traits and venom systems. Mol Biol Evol 38, 4867–4883.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Liberles, S.D., and Buck, L.B. (2006). A second class of chemosensory receptors in the olfactory epithelium. Nature 442, 645–650.

    Article  CAS  PubMed  Google Scholar 

  • Mikkers, H., Nawijn, M., Allen, J., Brouwers, C., Verhoeven, E., Jonkers, J., and Berns, A. (2004). Mice deficient for all PIM kinases display reduced body size and impaired responses to hematopoietic growth factors. Mol Cell Biol 24, 6104–6115.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Reseland, J.E., Larsen, F., Solheim, J., Eriksen, J.A., Hanssen, L.E., and Prydz, H. (1997). A novel human chymotrypsin-like digestive enzyme. J Biol Chem 272, 8099–8104.

    Article  CAS  PubMed  Google Scholar 

  • Sloan, J.L., and Mager, S. (1999). Cloning and functional expression of a human Na+ and Cl-dependent neutral and cationic amino acid transporter B0+. J Biol Chem 274, 23740–23745.

    Article  CAS  PubMed  Google Scholar 

  • Yang, L., Jiang, H., Wang, Y., Lei, Y., Chen, J., Sun, N., Lv, W., Wang, C., Near, T.J., and He, S. (2019). Expansion of vomeronasal receptor genes (OlfC) in the evolution of fright reaction in Ostariophysan fishes. Commun Biol 2, 235.

    Article  PubMed  PubMed Central  Google Scholar 

Download references

Acknowledgement

This work was supported by the Strategic Priority Research Program of the Chinese Academy of Sciences (XDB31000000), the National Natural Science Foundation of China (32170480, 31972866), and Youth Innovation Promotion Association, Chinese Academy of Sciences (http://www.yicas.cn). This research was supported by the Wuhan Branch, Supercomputing Center, Chinese Academy of Sciences, China.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Shunping He.

Ethics declarations

The author(s) declare that they have no conflict of interest. All the sequencing data were deposited at the NCBI (Mylopharyngodon piceus: PRJNA934151; Ctenopharyngodon Idella: PRJNA931646; Aristichthys nobilis: PRJNA891078; Hypophthalmichthys molitrix: PRJNA891019. The assembled genomes and analysis codes are available in Dryad (https://doi.org/10.5061/dryad.4qrfj6qgm) and Zenodo (https://doi.org/10.5281/zenodo.8411706).

Supporting information

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Wang, C., Yang, L., Lu, Y. et al. Genomic features for adaptation and evolutionary dynamics of four major Asian domestic carps. Sci. China Life Sci. (2024). https://doi.org/10.1007/s11427-023-2479-2

Download citation

  • Received:

  • Accepted:

  • Published:

  • DOI: https://doi.org/10.1007/s11427-023-2479-2

Navigation