Skip to main content
Log in

Isolation and characterization of rice straw degrading Streptomyces griseorubens C-5

  • Original Paper
  • Published:
Biodegradation Aims and scope Submit manuscript

Abstract

To reutilize rice straw generated during the agricultural production process, the actinomycete strain C-5 was isolated from soil that was under the stook for several years in the Heilongjiang province of China by using multiple selective culture media. Strain C-5 was identified as Streptomyces griseorubens by China General Microbiological Culture Collection Center (CGMCC) through morphological and physiological characterization combined with the result of 16S rRNA gene sequence and data analysis. This strain has simultaneous cellulase, laccase, peroxidase, xylanase and pectinase activity. The various chemical composition of rice straw were determined during fermentation process. Simultaneously the biodegradation process of rice straw stem was observed by scanning electron microscope (SEM). It is predicted that strain C-5 could decompose rice straw effectively and had promising prospects of being applied in improving the resource utilization of rice straw.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7

Similar content being viewed by others

References

  • Abdulla HM, El-Shatoury SA (2007) Actinomycetes in rice straw decomposition. Waste Manag 27:850–853

    Article  CAS  PubMed  Google Scholar 

  • Ahoefa AD, Cornu A, Nozie`re P, Besle JM, Dulphy JP, Michel D, Elisabeth G (2003) Microbial degradation of rice and barley straws in the sheep rumen and the donkey caecum. J Sci Food Agric 83:383–394

    Article  CAS  Google Scholar 

  • Bae HD, McAllister TA, Kokko EG, Leggett FL, Yanke LJ, Jakober KD, Ha JK, Shin HT, Cheng KJ (1997) Effect of silica on the colonization of rice straw by ruminal bacteria. Anim Feed Sci Technol 65:165–181

    Article  CAS  Google Scholar 

  • Ball AS, McCarthy AJ (1989) Production and properties of xylanases from actinomycetes. J Appl Bacteriol 66:439–444

    CAS  Google Scholar 

  • Ball AS, Betts WB, Mccarthy AJ (1989) Degradation of lignin-related compounds by actinomycetes. Appl Environ Microbiol 55:1642–1644

    CAS  PubMed  Google Scholar 

  • Ball AS, Godden B, Helvenstein P, Penninckx MJ, McCarthy AJ (1990) Lignocarbohydrate solubilization from straw by actinomycetes. Appl Environ Microbiol 56:3017–3022

    CAS  PubMed  Google Scholar 

  • Biely P (1985) Microbial xylanolytic systems. Trends Biotechnol 3:286–290

    Article  CAS  Google Scholar 

  • Enger MD, Sleeper BP (1965) Multiple cellulase system from Streptomyces antibioticus. J Bacteriol 89:23–27

    Article  CAS  PubMed  Google Scholar 

  • Gao XZ, Ma WQ, Ma CB, Zhang FS, Wang YH (2002) Analysis on the current status of utilization of crop straw in China. J Huazhong Agric Univ 21(3):242–247 (in Chinese with English abstract)

    CAS  Google Scholar 

  • Givens JD (1996) Air quality annual report. Louisiana Department of Environmental Quality, Baton Rouge

    Google Scholar 

  • Gottschalk LMF, Bon EPS, Nobrega R (2008) Lignin peroxidase from Streptomyces viridosporus T7A: enzyme concentration using ultrafiltration. Appl Biochem Biotechnol 147:23–32

    Article  CAS  PubMed  Google Scholar 

  • Hankin L, Anagnostakis SL (1977) Solid media containing carboxymethylcellulose to detect Cx cellulase activity of microorganisms. J Gen Microbiol 98:109–115

    CAS  PubMed  Google Scholar 

  • Harbers LH, Raiten DJ, Paulsen GM (1981) The role of plant epidermal silica as a structural inhibitor of rumen microbial digestion in steers. Nutr Rep Int 24:1057–1066

    CAS  Google Scholar 

  • Hendricks CW, Doyle JD, Hugley B (1995) A new solid medium for enumerating cellulose-utilizing bacteria in soil. Appl Environ Microbiol 61:2016–2019

    CAS  PubMed  Google Scholar 

  • Kawamura O, Senshu T, Horiguchi M, Matsumoto T (1973) Histochemical studies on the rumen digestion of rice straw cell wall and on the chemical determination of its non nutritive residue. Tohoku J Agric Res 24(4):183–191

    CAS  Google Scholar 

  • Kluepfel D, Shareck F, Mondou F, Morosoli R (1986) Characterization of cellulase and xylase activities of Streptomyces lividans. Appl Microbiol Biotechnol 24:230–234

    Article  CAS  Google Scholar 

  • Li XZ (1997) Streptomyces cellulolyticus sp. nov., a new cellulolytic member of the genus streptomyces. Int J Syst Bacteriol 47:443–445

    Article  CAS  PubMed  Google Scholar 

  • Mandels M, Sternberg D, Andreotti RE (1975) Growth and cellulase production by Trichoderma. In: Bailer M, Enari TM, Linko M (eds) Proceedings of symposium on enzymatic hydrolysis of cellulose. STTRA, Helsinki, pp 81–109

    Google Scholar 

  • Mason MG, Ball AS, Brandon JR, Silkstone G, Nicholls P, Wilson MT (2001) Extracellular heme peroxidase in actinomycetes: a case of mistaken identity. Appl Environ Microbiol 67:4512–4519

    Article  CAS  PubMed  Google Scholar 

  • McCarthy AJ (1987) Lignocellulose degrading actinomycetes. FEMS Microbiol Rev 46:145–163

    Article  CAS  Google Scholar 

  • Minamiyama H, Shimizu M, Kunoh H (2003) Mutiplication of isolatesR-5 of streptomyces galbus on rhododendron leaves and its production of cell wall-degrading enzymes. J Gen Plant Pathol 69:65–70

    Article  CAS  Google Scholar 

  • Parr JF, Papendick RI, Hornick SB, Meyer RE (1992) Soil quality: attributes and relationships to alternative and sustainable agriculture. Am J Altern Agric 7:5–11

    Article  Google Scholar 

  • Powell KL, Pedley S, Daniel G, Corfield M (2001) Ultrastructural observations of microbial succession and decay of wood buried at a Bronze Age archaeological site. Int Biodeterior Biodegradation 47:165–173

    Article  Google Scholar 

  • Reese ET, Siu RGH, Levinson HS (1950) The biological degradation of soluble cellulose derivatives and its relationship to the mechanism of cellulose hydrolysis. J Bacteriol 59:485–497

    CAS  PubMed  Google Scholar 

  • Robertson JB, Van Soest PJ (1981) The detergent system of analysis and its application to human foods. In: Janes WPT, Theander O (eds) The analysis of dietary fiber in food. I Marcell Dekker, NY, pp 123–156

    Google Scholar 

  • Saarilahti HT, Heino P, Pakkanen R, Kalkkinen N, Palvia I, Palva ET (1990) Structural analysis of the pheA gene and characterization of its protein product, endopolygalacturonase, of Erwinia carotovora subspecies carotovora. Mol Microbiol 4:1037–1044

    Article  CAS  PubMed  Google Scholar 

  • Shimizu M, Kunoh H (2000) Isolation of thatch-degrading bacteria and their physiological characters. J Jap Soc Turfgrass Sci 29:22–31

    Google Scholar 

  • Spear L, Gaallagher J, McHale L, McHale AP (1993) Production of cellulase and β-glucosidase activities following growth of Streptomyces hygroscopicus on cellulose containing media. Biotechnol Lett 15:1265–1268

    Article  CAS  Google Scholar 

  • Srinivasan C, D’souza TM, Boominathan K, Reddy CA (1995) Demonstration of laccase in the white rot Basidiomycete Phanerochaete chrysosporium BKM-F-1767. Appl Environ Microbiol 61:4274–4277

    CAS  PubMed  Google Scholar 

  • Taechowisan T, John FP, Saisamorn L (2003) Isolation of endophytic actinomycetes from selected plants and their antifungal activity. World J Microbiol Biotechnol 19:381–385

    Article  CAS  Google Scholar 

  • Tuncer M, Ball AS, Rob A, Wilson MT (1999) Optimization of extracellular lignocellulolytic enzyme production by a thermophilic actinomycete Thermomonospora fusca BD25. Enzyme Microb Technol 25:38–47

    Article  CAS  Google Scholar 

  • Van Soest PJ, Robertson JB (1985) Analysis of forages and fibrous foods. Cornell University, Ithaca

    Google Scholar 

  • Wang JK, Liu JX, Li JY, Wu YM, Ye JA (2007) Histological and rumen degradation changes of rice straw stem epidermis as influenced by chemical pretreatment. Anim Feed Sci Tech 136:51–62

    Article  CAS  Google Scholar 

  • Zhang JP, Wang JW, Jiang JM, Yang WD (2005) Comparison on lignin-degrading enzymes of Ganoderma-lucidum fungi. Forest Res 18:106–108 (in Chinese with English abstract)

    Google Scholar 

Download references

Acknowledgments

We are grateful to China General Microbiological Culture Collection Center (CGMCC) for supplying identification of strain C-5. This study was supported in part by Grant-in-Aids from the “Eleven Five” project of the national science and technology of China (No. 2006BAD07A01).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Qian Yang.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Xu, J., Yang, Q. Isolation and characterization of rice straw degrading Streptomyces griseorubens C-5. Biodegradation 21, 107–116 (2010). https://doi.org/10.1007/s10532-009-9285-8

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10532-009-9285-8

Keywords

Navigation