Abstract
Key message
The expression levels of HbREF3 and HbSRPP1 positively correlate with dry rubber yield (DRY) and fresh latex yield (LY) in both F1 population at the juvenile stage and clonal population at the mature stage.
Abstract
Hevea tree is almost the sole commercial source of natural rubber, an indispensable industrial raw material. Conventional Hevea breeding is hampered by a long cycle of 25–30 years whereas the use of reliable yield-related molecular markers may efficiently shorten the breeding cycle. Here, carefully selected Hevea trees in an F1 population at juvenile stage and a clonal population at mature stage were exploited to identify the correlations between the expression levels of 26 latex regeneration-related genes and six yield-related latex physiological parameters. The correlations varied strikingly between the two populations or across the 2 years of experiment in the F1 population. Nevertheless, in both populations, the expressions of two rubber-biosynthesis pathway genes, HbREF3 and HbSRPP1, correlated positively with both dry rubber yield (DRY) and fresh latex yield (LY). Moreover, compared with the juvenile F1 population, the mature clonal population saw much more significant correlations for DRY and LY with the other latex parameters. In brief, our findings contribute to identifying reliable marker genes used in Hevea breeding for early selection.
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References
Ambily PK, Thomas MS, Sreelatha S, Krishnakumar R, Annamalainathan K, Jacob J (2019) Expression analysis of rubber biosynthetic pathway genes in Hevea brasiliensis. J Plant Crops 46:102–111
Bakar MFA, Othman AS (2022) Comparative transcriptome analysis identifies potentially relevant genes in rubber clones with a high latex yield (Hevea brasiliensis). J Agrobiotech 13:61–76
Cardoso SEA, Freitas TA, Silva DdC, Gouvêa LRL, Gonçalves PdS, Mattos CRR, Garcia D (2014) Comparison of growth, yield and related traits of resistant Hevea genotypes under high South American leaf blight pressure. Ind Crops Prod 53:337–349
Chao J, Chen Y, Wu S, Tian W-M (2015) Comparative transcriptome analysis of latex from rubber tree clone CATAS8-79 and PR107 reveals new cues for the regulation of latex regeneration and duration of latex flow. BMC Plant Biol 15:1–12
Collins-Silva J, Nural AT, Skaggs A, Scott D, Hathwaik U, Woolsey R, Schegg K, McMahan C, Whalen M, Cornish K, Shintani D (2012) Altered levels of the Taraxacum kok-saghyz (Russian dandelion) small rubber particle protein, TkSRPP3, result in qualitative and quantitative changes in rubber metabolism. Phytochemistry 79:46–56
Cornish K (2001) Similarities and differences in rubber biochemistry among plant species. Phytochemistry 57:1123–1134
d’Auzac J, Jacob J-L, Chrestin HE (1989) Physiology of rubber tree latex: the laticiferous cell and latex-a model of cytoplasm. CRC Press, Boca Raton, Florida, USA
Epping J, Deenen N, Niephaus E, Stolze A, Fricke J, Huber C, Eisenreich W, Twyman R, Prüfer D, Gronover C (2015) A rubber transferase activator is necessary for natural rubber biosynthesis in dandelion. Nat Plants 1:1–9
Eschbach JM, Roussel D, Sype HVD, Jacob JL, D'auzac J (1984) Relationship between yield and clonal physiological characteristics of latex from Hevea brasiliensis. Physiol Veg 22:295–304
Fang P, Long X, Kav NNV, Fang Y, Qin Y, Yang J, Xiao X (2021) The hexokinases HbHXK2 and 4 are key enzymes involved in glucose metabolism and contribute to rubber productivity in Hevea brasiliensis (para rubber tree). Ind Crops Prod 159:113025
Gonçalves P, Silva M, Gouvêa L, Junior E (2006) Genetic variability for girth growth and rubber yield in Hevea brasiliensis. Sci Agr 63:246–254
Gouvêa LRL, Silva GAP, Verardi CK, de Oliveira ALB, Gonçalves ECP, Scaloppi-Junior EJ, de Moraes MLT, de Souza GP (2013) Rubber tree early selection for yield stability in time and among locations. Euphytica 191:365–373
He B (2015) Analysis of gene expression for the gene families involved in sugar metabolism and latex physiological and biochemistry parameters in latex regeneration. Dissertation, Hainan University, Haikou, China
Hedge JE, Hofreiter BT (1962) Carbohydrate chemistry. Academic Press, New York, pp 371–380
Hillebrand A, Post JJ, Wurbs D, Wahler D, Lenders M, Krzyzanek V, Prüfer D, Gronover CS (2012) Down-regulation of small rubber particle protein expression affects integrity of rubber particles and rubber content in Taraxacum brevicorniculatum. PLoS ONE 7:e41874
Jacob J-L, d’Auzac J, Prevôt J-C (1993) The composition of natural latex from Hevea brasiliensis. Clin Rev Allerg Immu 11:325–337
Jacob JL, Prevot JC, Chrestin H, Vidal A (1984) Glutathione reductase and thiols in latex; their role in Hevea yield. In: proceedings of the symposium “exploitation, physiology and improvement of Hevea”. IRCA-GERDAT, Montpellier, France. pp 101–114.
Klaewklad A, Nakkanong K, Nathaworn CD, Nualsri C (2017) Expression of the sucrose transporter 3 (HbSUT3) in rubber tree and its relation to latex yield. Mol Breed 37:1–10
Kongsawadworakul P, Viboonjun U, Romruensukharom P, Chantuma P, Ruderman S, Chrestin H (2009) The leaf, inner bark and latex cyanide potential of Hevea brasiliensis: evidence for involvement of cyanogenic glucosides in rubber yield. Phytochemistry 70:730–739
Koressaar T, Remm M (2007) Enhancements and modifications of primer design program primer3. Bioinformatics 23:1289–1291
Lacote R, Obouayeba S, Clément-Demange A, Dian K, Gnagne MY, Gohet E (2004) Panel management in rubber (Hevea brasiliensis) tapping and impact on yield, growth, and latex diagnosis. J Rubber Res 7:199–217
Laibach N, Hillebrand A, Twyman RM, Prüfer D, Schulze Gronover C (2015) Identification of a Taraxacum brevis corniculatum rubber elongation factor protein that is localized on rubber particles and promotes rubber biosynthesis. Plant J 82:609–620
Li H, Qin Y, Xiao X, Tang C (2011) Screening of valid reference genes for real-time RT-PCR data normalization in Hevea brasiliensis and expression validation of a sucrose transporter gene HbSUT3. Plant Sci 181:132–139
Li D, Zeng R, Li Y, Zhao M, Chao J, Li Y, Wang K, Zhu L, Tian W-M, Liang C (2016) Gene expression analysis and SNP/InDel discovery to investigate yield heterosis of two rubber tree F1 hybrids. Sci Rep 6:1–12
Lin T, Xu X, Ruan J, Liu S, Wu S, Shao X, Wang X, Gan L, Qin B, Yang Y, Cheng Z, Yang S, Zhang Z, Xiong G, Huang S, Yu H, Li J (2017) Genome analysis of Taraxacum kok-saghyz Rodin provides new insights into rubber biosynthesis. Natl Sci Rev 5:78–87
Lin T, Xu X, Du H, Fan X, Chen Q, Hai C, Zhou Z, Su X, Kou L, Gao Q, Deng L, Jiang J, You H, Ma Y, Cheng Z, Wang G, Liang C, Zhang G, Yu H, Li J (2022) Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum. Sci China Life Sci 65:515–528
Liu S, Lan J, Zhou B, Qin Y, Zhou Y, Xiao X, Yang J, Gou J, Qi J, Huang Y, Tang C (2015) HbNIN2, a cytosolic alkaline/neutral-invertase, is responsible for sucrose catabolism in rubber-producing laticifers of Hevea brasiliensis (para rubber tree). New Phytol 206:709–725
Long X, Li H, Yang J, Xin L, Fang Y, He B, Huang D, Tang C (2019) Characterization of a vacuolar sucrose transporter, HbSUT5, from Hevea brasiliensis: involvement in latex production through regulation of intracellular sucrose transport in the bark and laticifers. BMC Plant Biol 19:1–11
Lu J (2020) Molecular cloning and function analysis of phosphofructokinase playing a key role in glycolysis in Hevea brasiliensis latex. Dissertation, Hainan University, Haikou, China
Makita Y, Kawashima M, Lau NS, Othman AS, Matsui M (2018) Construction of Pará rubber tree genome and multi-transcriptome database accelerates rubber researches. BMC Genom 19:81–87
Nguyen BT, Dang MK (2016) Temperature dependence of natural rubber productivity in the southeastern Vietnam. Ind Crops Prod 83:24–30
Niephaus E, Müller B, van Deenen N, Lassowskat I, Bonin M, Finkemeier I, Prüfer D, Schulze Gronover C (2019) Uncovering mechanisms of rubber biosynthesis in Taraxacum koksaghyz–role of cis-prenyltransferase-like 1 protein. Plant J 100:591–609
Priya P, Venkatachalam P, Thulaseedharan A (2007) Differential expression pattern of rubber elongation factor (REF) mRNA transcripts from high and low yielding clones of rubber tree (Hevea brasiliensis Muell. Arg.). Plant Cell Rep 26:1833–1838
Priyadarshan PM (2017a) Latex production, diagnosis and harvest. Biology of Hevea Rubber. Springer, Cham, pp 51–82
Priyadarshan PM (2017b) Refinements to Hevea rubber breeding. Tree Genet Genom 13:1–17
Priyadarshan PM (2022) Molecular markers to devise predictive models for juvenile selection in Hevea rubber. Plant Breed 141:159–183
Purwaningrum Y, Asbur Y (2018) Relationship between latex production and physiology of rubber clone PB 260. Int J Eng Technol 7:298–301
Raj S, Das G, Pothen J, Dey SK (2005) Relationship between latex yield of Hevea brasiliensis and antecedent environmental parameters. Int J Biometeorol 49:189–196
Ran X, Liu Y, Zhao D (2022) The relationship between EuSRPP1 gene expression and rubber biosynthesis in Eucommia ulmoides Oliver (Du-zhong). Ind Crops Prod 175:114246
Sando T, Takaoka C, Mukai Y, Yamashita A, Hattori M, Ogasawara N, Fukusaki E, Kobayashi A (2008) Cloning and characterization of mevalonate pathway genes in a natural rubber producing plant, Hevea brasiliensis. Biosci Biotech Bioch 72:2049–2060
Sirinupong N, Suwanmanee P, Doolittle RF, Suvachitanont W (2005) Molecular cloning of a new cDNA and expression of 3-hydroxy-3-methylglutaryl-CoA synthase gene from Hevea brasiliensis. Planta 221:502–512
Soumahin EF, Obouayeba S, Anno PA (2009) Low tapping frequency with hormonal stimulation on Hevea brasiliensis clone PB 217 reduces tapping manpower requirement. J Anim Plant Sci 2:109–117
Supriya R, Priyadarshan PM (2019) Genomic technologies for Hevea breeding. Adv Genet 104:1–73
Suwanmanee P, Suvachittanont W, Fincher G (2003) Molecular cloning and sequencing of a cDNA encoding 3-Hydroxy-3-Methylglutaryl coenzyme A synthase from Hevea brasiliensis (HBK) Mull Arg. ScienceAsia 28:29–36
Tang C, Qi J, Li H, Zhang C, Wang Y (2007) A convenient and efficient protocol for isolating high-quality RNA from latex of Hevea brasiliensis (para rubber tree). J Biochem and Bioph Meth 70:749–754
Tang C, Huang D, Yang J, Liu S, Sakr S, Li H, Zhou Y, Qin Y (2010) The sucrose transporter HbSUT3 plays an active role in sucrose loading to laticifer and rubber productivity in exploited trees of Hevea brasiliensis (para rubber tree). Plant Cell Environ 33:1708–1720
Tang C, Yang M, Fang Y, Luo Y, Gao S, Xiao X, An Z, Zhou B, Zhang B, Tan X, Yeang H-Y, Qin Y, Yang J, Lin Q, Mei H, Montoro P, Long X, Qi J, Hua Y, He Z, Sun M, Li W, Zeng X, Cheng H, Liu Y, Yang J, Tian W, Zhuang N, Zeng R, Li D, He P, Li Z, Zou Z, Li S, Li C, Wang J, Wei D, Lai C-Q, Luo W, Yu J, Hu S, Huang H (2016) The rubber tree genome reveals new insights into rubber production and species adaptation. Nat Plants 2:1–10
Taussky H, Shorr EA (1953) A microcolorimetric method for the determination of inorganic phosphate. J Biol Chem 202:675–685
van Beilen JB, Poirier Y (2007) Establishment of new crops for the production of natural rubber. Trends Biotechnol 25:522–529
Venkatachalam P, Jayasree PK, Sushmakumari S, Jayashree R, Rekha K, Sobha S, Priya P, Kala RG, Thulaseedharan A (2007) Current perspectives on application of biotechnology to assist the genetic improvement of rubber tree (Hevea brasiliensis Muell. Arg.): an overview. Func Plant Sci Biotech 1:1–17
Vinod K, Pothen J, Chaudhuri D, Priyadarshan PM, Eappen T, Varghese M, Mandal D, Sharma A, Pal T, Devakumar A, Krishnakumar A (2000) Variation and trend of yield and related traits of Hevea brasiliensis Muell. Arg. in Tripura. Indian J Nat Rubber Res 13:69–78
Wu C, Li Y, Nie Z, Dai L, Kang G, Zeng R (2017) Molecular cloning and expression analysis of the mevalonate diphosphate decarboxylase gene from the latex of Hevea brasiliensis. Tree Genet Genom 13:1–16
Wu C, Lan L, Li Y, Nie Z, Zeng R (2018) The relationship between latex metabolism gene expression with rubber yield and related traits in Hevea brasiliensis. BMC Genom 19:1–18
Yamashita S, Takahashi S (2020) Molecular mechanisms of natural rubber biosynthesis. Annu Rev Biochem 89:821–851
Zhang Y, Xin L, Pirrello J, Fang Y, Yang J, Qi J, Montoro P, Tang C (2021) Ethylene response factors regulate expression of HbSUT3, the sucrose influx carrier in laticifers of Hevea brasiliensis. Tree Physiol 41:1278–1288
Acknowledgements
We would like to thank Yujie Fan, Xue Yang and Yongmei Li for their efforts in RNA extractions and field experiments. We also would like to thank the assistance of the other staff in Laboratory of Rubber Production Biology, Hainan University.
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This research has been jointly supported by the following grants: the National Natural Science Foundation of China (31825007, 32160383) and the Starting Research Fund of Hainan University.
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Lu, Y., Liu, K., Zhang, Y. et al. Expressional correlation of latex-regeneration genes with latex physiological parameters varies with population type and growth stage in Hevea tree. Trees 37, 1107–1119 (2023). https://doi.org/10.1007/s00468-023-02410-8
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DOI: https://doi.org/10.1007/s00468-023-02410-8