Skip to main content

Advertisement

Log in

Characterization of a Phosphatidylserine Synthase of Vibrio parahaemolyticus

  • Published:
Current Microbiology Aims and scope Submit manuscript

Abstract

Phosphatidylserine synthase (Pss) is involved in the metabolic pathway in phospholipid synthesis in different organisms. In this study, Pss expression in Vibrio parahaemolyticus was verified through liquid chromatography tandem-mass spectrometry. To analyze the characteristics of Pss, the recombinant Pss was overexpressed and purified from Escherichia coli. The optimum temperature and pH of Pss were 40 °C and 8, respectively. When reacting with divalent metal, Pss activity decreased. In addition, Pss could not only use cytidine diphosphate diacylglycerol (CDP-DAG, 16:0), but also CDP-DAG (18:1) as a substrate to produce cytidine 5′‐monophosphate. Furthermore, the 3D structure of Pss was predicted, and the results revealed that histidine and lysine of the two HKD motifs were present in the catalytic site. Moreover, CDP-DAG (16:0) was docked with the Pss model. To investigate whether the two HKD motifs in Pss are important to its activity, site-directed mutagenesis of histidine was performed. The results revealed that the activities of both H131A and H352A were diminished. Little is known regarding the catalytic site of type I Pss. This is the first report on the biochemical characterization of Pss in V. parahaemolyticus.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5

Similar content being viewed by others

References

  1. Okada M, Matsuzaki H, Shibuya I, Matsumoto K (1994) Cloning, sequencing, and expression in Escherichia coli of the Bacillus subtilis gene for phosphatidylserine synthase. J Bacteriol 176(24):7456–7461

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  2. Cassilly CD, Reynolds TB (2018) PS, It's complicated: the roles of phosphatidylserine and phosphatidylethanolamine in the pathogenesis of Candida albicans and other microbial pathogens. J Fungi (Basel). https://doi.org/10.3390/jof4010028

    Article  Google Scholar 

  3. Li J, Wang X (2019) Phospholipase D and phosphatidic acid in plant immunity. Plant Sci 279:45–50. https://doi.org/10.1016/j.plantsci.2018.05.021

    Article  CAS  PubMed  Google Scholar 

  4. Selvy PE, Lavieri RR, Lindsley CW, Brown HA (2011) Phospholipase D: enzymology, functionality, and chemical modulation. Chem Rev 111(10):6064–6119. https://doi.org/10.1021/cr200296t

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Xie Z, Ho WT, Exton JH (2000) Association of the N- and C-terminal domains of phospholipase D. Contribution of the conserved HKD motifs to the interaction and the requirement of the association for Ser/Thr phosphorylation of the enzyme. J Biol Chem 275(32):24962–24969. https://doi.org/10.1074/jbc.M909745199

    Article  CAS  PubMed  Google Scholar 

  6. Bullock WO, Fernandez JM, Short JM (1987) XL1-blue: a high efficiency plasmid transforming recA Escherichia coli strain with beta-galactosidase selection. Biotechniques 5:376–378

    CAS  Google Scholar 

  7. Simon R, Priefer U, Puhler A (1983) A broad host range mobilization system for in vivo genetic engineering: transposon mutagenesis in gram negative bacteria. Nat Biotech 1(9):784–791

    Article  CAS  Google Scholar 

  8. Philippe N, Alcaraz JP, Coursange E, Geiselmann J, Schneider D (2004) Improvement of pCVD442, a suicide plasmid for gene allele exchange in bacteria. Plasmid 51(3):246–255. https://doi.org/10.1016/j.plasmid.2004.02.003

    Article  CAS  PubMed  Google Scholar 

  9. Perkins DN, Pappin DJ, Creasy DM, Cottrell JS (1999) Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 20(18):3551–3567. https://doi.org/10.1002/(SICI)1522-2683(19991201)20:18<3551::AID-ELPS3551>3.0.CO;2-2

    Article  CAS  PubMed  Google Scholar 

  10. Huang RY, Lee CY (2019) Molecular and functional evidence of phosphatidylserine synthase in Vibrio parahaemolyticus. Microbiol Immunol 63(3–4):119–129. https://doi.org/10.1111/1348-0421.12676

    Article  CAS  PubMed  Google Scholar 

  11. Dowhan W (1992) Phosphatidylserine synthase from Escherichia coli. Methods Enzymol 209:287–298

    Article  CAS  PubMed  Google Scholar 

  12. Kanfer J, Kennedy EP (1964) Metabolism and function of bacterial lipids. II. Biosynthesis of phospholipids in Escherichia coli. J Biol Chem 239:1720–1726

    CAS  PubMed  Google Scholar 

  13. Waterhouse A, Bertoni M, Bienert S, Studer G, Tauriello G, Gumienny R, Heer FT, de Beer TAP, Rempfer C, Bordoli L, Lepore R, Schwede T (2018) SWISS-MODEL: homology modelling of protein structures and complexes. Nucleic Acids Res 46(W1):W296–W303. https://doi.org/10.1093/nar/gky427

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Tian W, Chen C, Lei X, Zhao J, Liang J (2018) CASTp 3.0: computed atlas of surface topography of proteins. Nucleic Acids Res 46(W1):W363–W367. https://doi.org/10.1093/nar/gky473

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  15. Grosdidier A, Zoete V, Michielin O (2011) SwissDock, a protein-small molecule docking web service based on EADock DSS. Nucleic Acids Res 39 (Web Server issue):W270–277. doi: 10.1093/nar/gkr366.

  16. Pettersen EF, Goddard TD, Huang CC, Couch GS, Greenblatt DM, Meng EC, Ferrin TE (2004) UCSF Chimera–a visualization system for exploratory research and analysis. J Comput Chem 25(13):1605–1612. https://doi.org/10.1002/jcc.20084

    Article  CAS  PubMed  Google Scholar 

  17. Xia Y, Chu W, Qi Q, Xun L (2015) New insights into the QuikChange process guide the use of Phusion DNA polymerase for site-directed mutagenesis. Nucleic Acids Res 43(2):e12. https://doi.org/10.1093/nar/gku1189

    Article  CAS  PubMed  Google Scholar 

  18. Zhang YN, Lu FP, Chen GQ, Li Y, Wang JL (2009) Expression, purification, and characterization of phosphatidylserine synthase from Escherichia coli K12 in Bacillus subtilis. J Agric Food Chem 57(1):122–126. https://doi.org/10.1021/jf802664u

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgement

This work was supported by the Ministry of Science and Technology of Taiwan (Grant No. MOST 106–2313-B-002–024).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Chia-Yin Lee.

Ethics declarations

Conflict of interest

The authors declare that they have no conflicts of interest.

Additional information

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Huang, RY., Lee, CY. Characterization of a Phosphatidylserine Synthase of Vibrio parahaemolyticus. Curr Microbiol 77, 710–715 (2020). https://doi.org/10.1007/s00284-019-01854-x

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00284-019-01854-x

Navigation