Skip to main content
Log in

High-level heterologous gene expression in Ochrobactrum anthropi using an A-rich UP element

  • Applied Genetics and Molecular Biotechnology
  • Published:
Applied Microbiology and Biotechnology Aims and scope Submit manuscript

Abstract

DNA regions that flank a gene’s promoter play an important role in determining transcription efficiency by interacting with the carboxy-terminal domain of RNA polymerase α-subunit. We placed an adenine-rich upstream element (UP) between −38 and −59 of the core trc promoter to enhance gene expression in Ochrobactrum anthropi up to 66-fold. The high level of expression achieved by the UP element and the N-terminus fusion of a 6xHis epitope tag facilitated detection and purification of heterologous proteins directly from O. anthropi.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

References

  • Aiyar SE, Gourse RL, Ross W (1998) Upstream A-tracts increase bacterial promoter activity through interactions with the RNA polymerase alpha subunit. Proc Natl Acad Sci USA 95:14652–14657

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Amann E, Brosius J, Ptashne M (1983) Vectors bearing a hybrid trp-lac promoter useful for regulated expression of cloned genes in Escherichia coli. Gene 25:167–178

    Article  CAS  PubMed  Google Scholar 

  • Asano Y, Mori T, Hanamoto S, Kato Y, Nakazawa A (1989a) A new D-stereospecific amino acid amidase from Ochrobactrum anthropi. Biochem Biophys Res Commun 162:470–474

    Article  CAS  PubMed  Google Scholar 

  • Asano Y, Nakazawa A, Kato Y, Kondo K (1989b) Properties of a novel D-stereospecific aminopeptidase from Ochrobactrum anthropi. J Biol Chem 264:14233–14239

    CAS  PubMed  Google Scholar 

  • Asano Y, Kato Y, Yamada A, Kondo K (1992) Structural similarity of D-aminopeptidase to carboxypeptidase DD and beta-lactamases. Biochemistry 31:2316–2328

    Article  CAS  PubMed  Google Scholar 

  • Christenson JC, Pavia AT, Seskin K, Brockmeyer D, Korgenski EK, Jenkins E, Pierce J, Daly JA (1997) Meningitis due to Ochrobactrum anthropi: an emerging nosocomial pathogen. A report of 3 cases. Pediatr Neurosurg 27:218–221

    Article  CAS  PubMed  Google Scholar 

  • Estrem ST, Gaal T, Ross W, Gourse RL (1998) Identification of an UP element consensus sequence for bacterial promoters. Proc Natl Acad Sci USA 95:9761–9766

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Fanuel L, Thamm I, Kostanjevecki V, Samyn B, Joris B, Goffin C, Brannigan J, Van Beeumen J, Frere JM (1999) Two new aminopeptidases from Ochrobactrum anthropi active on D-alanyl-p-nitroanilide. Cell Mol Life Sci 55:812–818

    Article  CAS  PubMed  Google Scholar 

  • Gard JK, Feng PC, Hutton WC (1997) Nuclear magnetic resonance timecourse studies of glyphosate metabolism by microbial soil isolates. Xenobiotica 27:633–644

    Article  CAS  PubMed  Google Scholar 

  • Higgins CS, Avison MB, Jamieson L, Simm AM, Bennett PM, Walsh TR (2001) Characterization, cloning and sequence analysis of the inducible Ochrobactrum anthropi AmpC beta-lactamase. J Antimicrob Chemother 47:745–754

    Article  CAS  PubMed  Google Scholar 

  • Laura D, De Socio G, Frassanito R, Rotilio D (1996) Effects of atrazine on Ochrobactrum anthropi membrane fatty acids. Appl Environ Microbiol 62:2644–2646

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Lebuhn M, Achouak W, Schloter M, Berge O, Meier H, Barakat M, Hartmann A, Heulin T (2000) Taxonomic characterization of Ochrobactrum sp. isolates from soil samples and wheat roots, and description of Ochrobactrum tritici sp. nov. and Ochrobactrum grignonense sp. nov. Int J Syst Evol Microbiol 50(Pt 6):2207–2223

    Article  CAS  PubMed  Google Scholar 

  • Lechner U, Baumbach R, Becker D, Kitunen V, Auling G, Salkinoja-Salonen M (1995) Degradation of 4-chloro-2-methylphenol by an activated sludge isolate and its taxonomic description. Biodegradation 6:83–92

    Article  CAS  PubMed  Google Scholar 

  • Makrides SC (1996) Strategies for achieving high-level expression of genes in Escherichia coli. Microbiol Rev 60:512–538

    CAS  PubMed  PubMed Central  Google Scholar 

  • Ogawa J, Takeda S, Xie SX, Hatanaka H, Ashikari T, Amachi T, Shimizu S (2001) Purification, characterization, and gene cloning of purine nucleosidase from Ochrobactrum anthropi. Appl Environ Microbiol 67:1783–1787

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Schafer A, Konrad R, Kuhnigk T, Kampfer P, Hertel H, Konig H (1996) Hemicellulose-degrading bacteria and yeasts from the termite gut. J Appl Bacteriol 80:471–478

    Article  CAS  PubMed  Google Scholar 

  • Seleem MN, Vemulapalli R, Boyle SM, Schurig GG, Sriranganathan N (2004) Improved expression vector for Brucella species. Biotechniques 37:740–744

    Article  CAS  PubMed  Google Scholar 

  • Sonke T, Ernste S, Tandler RF, Kaptein B, Peeters WP, Van Assema FB, Wubbolts MG, Schoemaker HE (2005) L-selective amidase with extremely broad substrate specificity from Ochrobactrum anthropi NCIMB 40321. Appl Environ Microbiol 71:7961–7973

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Vemulapalli R, He Y, Boyle SM, Sriranganathan N, Schurig GG (2000) Brucella abortus strain RB51 as a vector for heterologous protein expression and induction of specific Th1 type immune responses. Infect Immun 68:3290–3296

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Yu WL, Lin CW, Wang DY (1998) Clinical and microbiologic characteristics of Ochrobactrum anthropi bacteremia. J Formos Med Assoc 97:106–112

    CAS  PubMed  Google Scholar 

Download references

Acknowledgements

We express our appreciation to Dr. Tim Larson of Virginia Tech for his critical reading of the manuscript and suggestions. We would like to thank Mrs. Kay Carlson of Virginia tech for providing us with O. anthropi strain and the support throughout the experiment.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Nammalwar Sriranganathan.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Seleem, M., Ali, M., Abd Al-Azeem, M.W. et al. High-level heterologous gene expression in Ochrobactrum anthropi using an A-rich UP element. Appl Microbiol Biotechnol 73, 1123–1127 (2007). https://doi.org/10.1007/s00253-006-0555-7

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00253-006-0555-7

Keywords

Navigation