Skip to main content
Log in

Hybridizationin situ of whole-mount messenger RNA in plants

  • Protocols
  • Published:
Plant Molecular Biology Reporter Aims and scope Submit manuscript

Abstract

A procedure is presented for the detection of mRNA in whole-mount preparations of youngArabidopsis seedlings using digoxigenin (DIG)-labeled RNA probes. It includes tissue preservation with formaldehyde, permeabilization with polyoxyethy lenesorbitan (Tween 20), DMSO, and heptane. Hybridization signal is detected using colloidal gold or alkaline-phosphatase-conjugated anti-DIG antibodies.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Abbreviations

DIC:

differential interference contrast

DIG:

digoxigenin

IAA:

indol-3-acetic acid

ISH:

in-situ hybridization

SOD:

superoxide dismutase

Tween:

polyoxyethylenesorbitan

WISH:

whole-mountin situ hybridization

References

  • Angerer, L. M. and R. C. Angerer 1981. Detection of poly A+ RNA in sea urchin eggs and embryos by quantitativein situ hybridization. Nucl. Acids. Res. 9: 2819–2840.

    Article  PubMed  CAS  Google Scholar 

  • Bauwens, S., K. Katsanis, M. Van Montagu, P. Van Oostveldt and G. Engler. 1994. Procedure for whole mount fluorescencein situ hybridisation on interphase nuclei ofArabidopsis thaliana. Plant J. 6:123–131.

    Article  Google Scholar 

  • Coen, E. S., J. M. Romero, S. Doyle, R. Elliott, G. Murphy and R. Carpenter. 1990.floricaula: A homeotic gene required for flower development inAntirrhinum majus. Cell 63: 1311–1322.

    Article  PubMed  CAS  Google Scholar 

  • Cox, K., D. V. DeLeon, L. M. Angenrer and R. C. Angerer. 1984. Detection of mRNAs in sea urchin embryos byin situ hybridization using asymmetric RNA probes. Dev. Biol. 101: 485–502.

    Article  PubMed  CAS  Google Scholar 

  • Cox, K. H. and R. B. Goldberg. 1989. Analysis of plant gene expression. In:Plant Molecular Biology, A Practical Approach. pp. 1–35, D. Shaw, ed. IRL, Oxford.

    Google Scholar 

  • Ferreira, P. C. G., A.S. Hemerly, R. Villarroel, M. Van Montagu and D. Inzé. 1991. TheArabidopsis functional homolog of the p34cdc2 protein kinase. Plant Cell 3: 531–540.

    Article  PubMed  CAS  Google Scholar 

  • Ferreira, P. C. G., A. Hemerly J. de Almeida Engler, C. Bergounioux, S. Burssens, M. Van Montagu, G. Engler and D. Inzé. 1994. Three discrete classes ofArabidopsis cyclins are expressed during different intervals of the cell cycle. Proc. Natl. Acad. Sci. USA: in press.

  • Hemerly, A., C. Bergounioux, M. Van Montagu, D. Inzé and P. C. G. Ferreira 1992. Genes regulating the plant cell cycle: Isolation of a mitotic-like cyclin fromArabidopsis thaliana. Proc. Natl. Acad. Sci. USA 89:3295–3299.

    Article  PubMed  CAS  Google Scholar 

  • Hemerly, A. S., P. G. Ferreira, J. de Almeida Engler, M. Van Montagu, G. Engler and D. Inzé. 1993.Cdc2a expression inArabidopsis thaliana is linked with competence for cell division. Plant Cell 5: 1711–1723.

    Article  PubMed  CAS  Google Scholar 

  • Jackson, D., B. Veit and S. Hake. 1994. Expression of maize KNOTTED1 related homeobox genes in the shoot apical meristem predicts patterns of morphogenesis in the vegetative shoot. Development 120:405–413.

    CAS  Google Scholar 

  • Ludevid, D., H. Höfte, E. Himelblau and M. J. Chrispeels. 1992. The expression pattern of the tonoplast intrinsic protein ψ-TIP inArabidopsis thaliana is correlated with cell enlargement. Plant Physiol. 100: 1633–1639.

    Article  PubMed  CAS  Google Scholar 

  • Meyerowitz, E. M. 1987.In situ hybridization to RNA in plant tissue. Plant Mol. Biol. Reptr. 5: 242–250.

    Article  CAS  Google Scholar 

  • Tautz, D. and C. Pfeifle. 1989. a non-radioactivein situ hybridization method for the localization of specific RNAs inDrosophila embryos reveals translational control of the segmentation genehunchback. Chromosoma 98:81–85.

    Article  PubMed  CAS  Google Scholar 

  • Terryn, N., M. Brito Arias, G. Engler C. Tiré, R. Villarroel, M. Van Montagu and D. Inzé. 1993.Rha1, a gene encoding a small GTP binding protein fromArabidopsis primarily expressed in developing guard cells. Plant Cell 5: 1761–1769.

    Article  PubMed  CAS  Google Scholar 

  • Van Camp, W., C. Bowler, R. Villarroel, E. W. T. Tsang, M. Van Montagu and D. Inzé. 1990. Characterization of iron superoxide dismutase cDNAs from plants obtained by genetic complementation inEscherichia coli. Proc. Natl. Acad. Sci. USA 87: 9903–9907.

    Article  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Marc Van Montagu.

Rights and permissions

Reprints and permissions

About this article

Cite this article

de Almeida Engler, J., Van Montagu, M. & Engler, G. Hybridizationin situ of whole-mount messenger RNA in plants. Plant Mol Biol Rep 12, 321–331 (1994). https://doi.org/10.1007/BF02669275

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF02669275

Key words

Navigation