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DET1 regulates the proteasomal degradation of LHY, a component of the Arabidopsis circadian clock

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Abstract

Multiple photoreceptors contribute to the entrainment of the Arabidopsis circadian clock to daily cycles of light and darkness but little is known of the mechanisms by which these pathways affect the central oscillator. Here we investigate the epistatic interaction between DE-ETIOLATED 1 (DET1), a negative regulator of light-regulated gene expression, and LATE ELONGATED HYPOCOTYL (LHY), one of the core components of the circadian oscillator. The daily onset of LHY gene expression was advanced by approximately 4  h in det1-1 mutant plants, suggesting that the wild-type DET1 protein might function to repress its transcription during the subjective night. lhy-1 det1-1 double mutants exhibited arrhythmic expression of the CAB gene in constant light, similar to the lhy-1 mutant parent. However, additive effects of the lhy-1 and det1-1 mutations on CAB2 expression patterns were revealed under diurnal light–dark cycles. Since the lhy-1 mutation causes aberrant, constitutive transcription of LHY from a constitutive viral promoter, this observation indicated that effects of DET1 were not mediated through the regulation of LHY transcription. Furthermore, the light-driven, rhythmic accumulation of the LHY protein in the lhy-1 mutant was altered by the det1-1 mutation, suggesting that DET1 might regulate LHY expression at the post-transcriptional level. In vitro protein degradation assays demonstrated that the LHY protein is turned over rapidly through the proteasome pathway. Similar degradation was observed whether plant tissue was harvested during the light or dark portion of the diurnal cycle, but the process was significantly accelerated in det1-1 mutant extracts. These results indicate that the wild-type DET1 protein acts to inhibit the proteolytic turnover of the LHY protein, and suggest a mechanism for the period-shortening effect of the det1-1 mutation. These findings add to recent evidence suggesting a role for DET1 in a ubiquitination pathway and identify a substrate for DET1-regulated protein turn-over.

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Abbreviations

CAB:

CHLOROPHYLL a/b-BINDING PROTEIN

CCA1:

CIRCADIAN CLOCK-ASSOCIATED-1

DET1:

DE-ETIOLATED 1

LHY:

LATE ELONGATED HYPOCOTYL

luc:

firefly luciferase

TOC1:

Timing of CAB 1

12L12D:

the alternation of 12 h of light and 12 h of darkness

References

  • D. Alabadi T. Oyama M.J. Yanovsky F.G., Harmon P. Mas S.A. Kay (2001) ArticleTitleReciprocal regulation between TOC1 and LHY/CCA1 within the Arabidopsis circadian clock Science 293 880–883 Occurrence Handle10.1126/science.1061320 Occurrence Handle11486091

    Article  PubMed  Google Scholar 

  • D. Alabadi M.J. Yanovsky P. Mas S.L. Harmer S.A. Kay (2002) ArticleTitleCritical role for CCA1 and LHY in maintaining circadian rhythmicity in Arabidopsis Curr. Biol. Cb 12 757–761 Occurrence Handle10.1016/S0960-9822(02)00815-1

    Article  Google Scholar 

  • G. Benvenuto F. Formiggini P. Laflamme M. Malakhov C. Bowler (2002) ArticleTitleThe photomorphogenesis regulator DET1 binds the amino-terminal tail of histone H2B in a nucleosome Context Curr. Biol. Cb 12 1529 Occurrence Handle10.1016/S0960-9822(02)01105-3

    Article  Google Scholar 

  • M. Brand J.G. Moggs M. Oulad-Abdelghani F. Lejeune F.J. Dilworth J. Stevenin G. Almouzni L. Tora (2001) ArticleTitleUV-damaged DNA-binding protein in the TFTC complex links DNA-damage recognition to nucleosome acetylation EMBO J. 20 3187–3196 Occurrence Handle10.1093/emboj/20.12.3187 Occurrence Handle1:CAS:528:DC%2BD3MXltlaktrk%3D Occurrence Handle11406595

    Article  CAS  PubMed  Google Scholar 

  • D.A. Chamovitz N. Wei M.T. Osterlund A.G. Arnim Particlevon J.M. Saub M. Matsui X.W. Deng (1996) ArticleTitleThe COP9 complex, a novel multisubunit nuclear regulator involved in the light control of a plant developmental switch Cell 86 115–121 Occurrence Handle10.1016/S0092-8674(00)80082-3 Occurrence Handle1:CAS:528:DyaK28XktlGnsbo%3D Occurrence Handle8689678

    Article  CAS  PubMed  Google Scholar 

  • M. Holm L.G. Ma L.J. Qu X.W. Deng (2002) ArticleTitleTwo interacting bZIP proteins are direct targets of COP1-mediated control of light-dependent gene expression in Arabidopsis Genes. Develop. 16 1247–1259 Occurrence Handle10.1101/gad.969702 Occurrence Handle1:CAS:528:DC%2BD38XktFSmsLY%3D Occurrence Handle12023303

    Article  CAS  PubMed  Google Scholar 

  • T. Imaizumi H.G. Tran T.E. Swartz W. Briggs S.A. Kay (2003) ArticleTitleFKF1 is essential for photoperiodic light signalling in Arabidopsis Nature 426 302–306 Occurrence Handle10.1038/nature02090 Occurrence Handle1:CAS:528:DC%2BD3sXptVOisbg%3D Occurrence Handle14628054

    Article  CAS  PubMed  Google Scholar 

  • J.A. Jarillo J. Capel R.H. Tang H.Q. Yang J.M. Alonso J.R. Ecker A.R. Cashmore (2001) ArticleTitleAn Arabidopsis circadian clock component interacts with both CRY1 and phyB Nature 410 487–490 Occurrence Handle10.1038/35068589 Occurrence Handle1:CAS:528:DC%2BD3MXisFahsLc%3D Occurrence Handle11260718

    Article  CAS  PubMed  Google Scholar 

  • J.Y. Kim H.R. Song B.L. Taylor I.A. Carre (2003a) ArticleTitleLight-regulated translation mediates gated induction of the Arabidopsis clock protein LHY The Embo J. 22 935–944 Occurrence Handle10.1093/emboj/cdg075 Occurrence Handle1:CAS:528:DC%2BD3sXit1yhurw%3D

    Article  CAS  Google Scholar 

  • J.-Y. Kim H.-R. Song B.L. Taylor I.A. Carré (2003b) ArticleTitleLight-regulated translation mediates gated induction of the Arabidopsis clock protein LHY EMBO J. 22 935–944 Occurrence Handle10.1093/emboj/cdg075 Occurrence Handle1:CAS:528:DC%2BD3sXit1yhurw%3D

    Article  CAS  Google Scholar 

  • W.-Y. Kim R. Geng D.E. Somers (2003c) ArticleTitleCircadian phase-specific degradation of the F-box protein ZTL is mediated by the proteasome Proc. Natl. Acad. Sci. USA 100 4938–4993

    Google Scholar 

  • T. Kiyosue M. Wada (2000) ArticleTitleLKP1 (LOV kelch protein 1): a factor involved in the regulation of flowering time in Arabidopsis Plant J. 23 807–815 Occurrence Handle10.1046/j.1365-313x.2000.00850.x Occurrence Handle1:CAS:528:DC%2BD3cXnslWgt7g%3D Occurrence Handle10998191

    Article  CAS  PubMed  Google Scholar 

  • B. Kloss J.L. Price L. Saez J. Blau A., Rothenfluh C.S. Wesley M.W. Young (1998) ArticleTitleThe Drosophila clock gene double-time encodes a protein closely related to human casein kinase Iepsilon Cell 94 97–107 Occurrence Handle10.1016/S0092-8674(00)81225-8 Occurrence Handle1:CAS:528:DyaK1cXkslSqurw%3D Occurrence Handle9674431

    Article  CAS  PubMed  Google Scholar 

  • Y. Liu J. Loros J.C. Dunlap (2000) ArticleTitlePhosphorylation of the Neurospora clock protein FREQUENCY determines its degradation rate and strongly influences the period length of the circadian clock Proc. Natl. Acad. Sci. USA 97 234–239 Occurrence Handle10.1073/pnas.97.1.234 Occurrence Handle1:CAS:528:DC%2BD3cXjvVGjsg%3D%3D Occurrence Handle10618401

    Article  CAS  PubMed  Google Scholar 

  • L. Ma H. Zhao X.W. Deng (2003) ArticleTitleAnalysis of the mutational effects of the COP/DET/FUS loci on genome expression profiles reveals their overlapping yet not identical roles in regulating Arabidopsis seedling development Development (Cambridge, England) 130 969–981

    Google Scholar 

  • E. Martinez V.B. Palhan A. Tjemberg E.S. Lymar A.M. Gmaper T.K. Kundu B.T. Chait R.G. Roeder (2001) ArticleTitleHuman STAGA complex is a chromatin-acetylating transcription coactivator that interacts with pre-mRNA splicing and DNA damage-binding protein factors in vivo Mol. Cell. Biol. 21 6782–6795 Occurrence Handle10.1128/MCB.21.20.6782-6795.2001 Occurrence Handle1:CAS:528:DC%2BD3MXntFChsbs%3D Occurrence Handle11564863

    Article  CAS  PubMed  Google Scholar 

  • J.F. Martinez-Garcia E. Huq P.H. Quail (2000) ArticleTitleDirect targeting of light signals to a promoter element-bound transcription factor Science 288 859–863 Occurrence Handle10.1126/science.288.5467.859 Occurrence Handle1:CAS:528:DC%2BD3cXjtFGis7k%3D Occurrence Handle10797009

    Article  CAS  PubMed  Google Scholar 

  • P. Mas D. Alabadi M.J. Yanovsky T. Oyama S.A. Kay (2003a) ArticleTitleDual role of TOC1 in the control of circadian and photomorphogenic responses in Arabidopsis Plant Cell 15 223–236 Occurrence Handle10.1105/tpc.006734 Occurrence Handle1:CAS:528:DC%2BD3sXmtFemtw%3D%3D

    Article  CAS  Google Scholar 

  • P. Mas W.Y. Kim D.E. Somers S.A. Kay (2003b) ArticleTitleTargeted degradation of TOC1 by ZTL modulates circadian function in Arabidopsis thaliana Nature 426 567–570 Occurrence Handle10.1038/nature02163 Occurrence Handle1:CAS:528:DC%2BD3sXpsVejtrs%3D

    Article  CAS  Google Scholar 

  • B.B. Maxwell C.R. Andersson D.S. Poole S.A. Kay J. Chory (2003) ArticleTitleHY5, circadian clock-associated 1 and a cis-element, DET1 dark-response element, mediate DET1 regulation of chlorophyll a/b-binding protein 2 expression Plant Physiol. 133 1565–1577 Occurrence Handle10.1104/pp.103.025114 Occurrence Handle1:CAS:528:DC%2BD2cXhvFar Occurrence Handle14563928

    Article  CAS  PubMed  Google Scholar 

  • A.J. Millar S.R. Short K. Hiratsuka N.-H. Chua S.A. Kay (1992) ArticleTitleFirefly luciferase as a reporter of regulated gene expression in higher plants Plant Mol. Biol. Rep. 10 324–337 Occurrence Handle1:CAS:528:DyaK3sXht1SisL4%3D

    CAS  Google Scholar 

  • A.J. Millar M. Straume J. Chory N.H. Chua S.A. Kay (1995) ArticleTitleThe regulation of circadian period by phototransduction pathways in Arabidopsis Science 267 1163–1166 Occurrence Handle1:CAS:528:DyaK2MXktVKjsb8%3D Occurrence Handle7855596

    CAS  PubMed  Google Scholar 

  • T. Mizoguchi K. Wheatley Y. Hanzawa L. Wright M. Mizoguchi H.R. Song I.A. Carre G. Coupland (2002) LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis 2 629–641 Occurrence Handle1:CAS:528:DC%2BD38XktVGjs7w%3D

    CAS  Google Scholar 

  • D.C. Nelson J. Lasswell L.E. Rogg M.A. Cohen B. Bartel (2000) ArticleTitleFKF-1, a clock-controlled gene that regulates the transition to flowering in Arabidopsis Cell 101 331–340 Occurrence Handle10.1016/S0092-8674(00)80842-9 Occurrence Handle1:CAS:528:DC%2BD3cXjtFSrtLk%3D Occurrence Handle10847687

    Article  CAS  PubMed  Google Scholar 

  • M.T. Osterlund C.S. Hardtke N. Wei X.-W. Deng (2000) ArticleTitleTargeted destabilization of HY5 during light-regulated development of Arabidopsis Nature 405 462–465 Occurrence Handle10.1038/35013076 Occurrence Handle1:CAS:528:DC%2BD3cXjslylurw%3D Occurrence Handle10839542

    Article  CAS  PubMed  Google Scholar 

  • A. Pepper T. Delaney J. Chory (1993) ArticleTitleGenetic interaction in plant photomorphogenesis Sem.Dev.Biol. 4 6

    Google Scholar 

  • A. Pepper T. Delaney T. Washburn D. Poole J. Chory (1994) ArticleTitleDET1, a negative regulator of light-mediated development and gene expression in Arabidopsis, encodes a novel nuclear-localized protein Cell 78 109–116 Occurrence Handle10.1016/0092-8674(94)90577-0 Occurrence Handle1:CAS:528:DyaK2cXlvFOgsro%3D Occurrence Handle8033202

    Article  CAS  PubMed  Google Scholar 

  • J.L. Price J. Blau A. Rothenfluh M. Abodeely B. Kloss M.W. Young (1998) ArticleTitledouble-time is a novel Drosophila clock gene that regulates PERIOD protein accumulation Cell 94 83–95 Occurrence Handle10.1016/S0092-8674(00)81224-6 Occurrence Handle1:CAS:528:DyaK1cXkslSqur8%3D Occurrence Handle9674430

    Article  CAS  PubMed  Google Scholar 

  • P.H. Quail (2002) ArticleTitlePhytochrome photosensory signalling networks Nat. Rev. Mol. Cell. Biol. 3 85–93 Occurrence Handle10.1038/nrm728 Occurrence Handle1:CAS:528:DC%2BD38XhsFSrsrY%3D Occurrence Handle11836510

    Article  CAS  PubMed  Google Scholar 

  • L.C. Roden H.-R. Song S. Jackson K. Morris I.A. Carré (2002) ArticleTitleFloral responses to photoperiod are correlated with the timing of rhythmic gene expression relative to dawn and dusk, in Arabidopsis Proc. Natl. Acad. Sci. USA 99 13313–13318 Occurrence Handle10.1073/pnas.192365599 Occurrence Handle1:CAS:528:DC%2BD38XnvFGgsL4%3D Occurrence Handle12271123

    Article  CAS  PubMed  Google Scholar 

  • R. Schaffer N. Ramsay A. Samach S. Corden J. Putterill I.A. Carré G. Coupland (1998) ArticleTitleThe late elongated hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering Cell 93 1219–1229 Occurrence Handle10.1016/S0092-8674(00)81465-8 Occurrence Handle1:CAS:528:DyaK1cXksVSqsLo%3D

    Article  CAS  Google Scholar 

  • D.F. Schroeder M. Gahrtz B.B. Maxwell R.K. Cook J.M. Kan J.M. Alonso J.R. Ecker J. Chory (2002) ArticleTitle De-etiolated 1 and damaged DNA binding protein 1 interact to regulate Arabidopsis photomorphogenesis Curr. Biol. Cb12 1462–1472 Occurrence Handle10.1016/S0960-9822(02)01106-5

    Article  Google Scholar 

  • T.F. Schultz T. Kiyosue M.J. Yanovsky M. Wada S.A. Kay (2001) ArticleTitleA role for LKP2 in the circadian clock of Arabidopsis Plant Cell 13 2659–2670 Occurrence Handle10.1105/tpc.13.12.2659 Occurrence Handle1:CAS:528:DC%2BD38XktlOhtg%3D%3D Occurrence Handle11752379

    Article  CAS  PubMed  Google Scholar 

  • C. Schwechheimer X.-W. Deng (2000) ArticleTitleThe COP/DET/FUS proteins - regulators of eukaryotic growth and development Sem. Cell Develop. Biol. 11 495–503 Occurrence Handle10.1006/scdb.2000.0203 Occurrence Handle1:CAS:528:DC%2BD3MXisFeqtQ%3D%3D

    Article  CAS  Google Scholar 

  • C. Schwechheimer G. Serino J. Callis W.L. Crosby S. Lyapina R.J. Deshaies W.M. Gray M. Estelle X.W. Deng (2001) ArticleTitleInteractions of the COP9 signalosome with the E3 ubiquitin ligase SCFTIRI in mediating auxin response Science 292 1379–1382 Occurrence Handle10.1126/science.1059776 Occurrence Handle1:CAS:528:DC%2BD3MXjvVGjtL0%3D Occurrence Handle11337587

    Article  CAS  PubMed  Google Scholar 

  • H.S. Seo J.Y. Yang M. Ishikawa C. Bolle M.L. Ballasteros N.-H. Chua (2003) ArticleTitleLAF1 ubiquitination by COP1 controls photomorphogenesis and is stimulated by SPA1 Nature 424 995–999 Occurrence Handle10.1038/nature01696

    Article  Google Scholar 

  • D.E. Somers T.F. Schultz M. Milnamow S.A. Kay (2000) ArticleTitleZEITLUPE encodes a novel clock-associated PAS protein from Arabidopsis Cell 101 319–329 Occurrence Handle10.1016/S0092-8674(00)80841-7 Occurrence Handle1:CAS:528:DC%2BD3cXjtFSrtLg%3D Occurrence Handle10847686

    Article  CAS  PubMed  Google Scholar 

  • Z.Y. Wang D. Kenigsbuch L. Sun E. Harel M.S. Ong E.M. Tobin (1997) ArticleTitleA Myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene Plant Cell 9 491–507 Occurrence Handle10.1105/tpc.9.4.491 Occurrence Handle1:CAS:528:DyaK2sXivFCltr8%3D Occurrence Handle9144958

    Article  CAS  PubMed  Google Scholar 

  • Z.-Y. Wang E.M. Tobin (1998) ArticleTitleConstitutive expression of the CIRCADIAN CLOCK ASSOCIATED (CCA1) gene disrupts circadian rhythms and suppresses its own expression Cell 93 1207–1217 Occurrence Handle10.1016/S0092-8674(00)81464-6 Occurrence Handle1:CAS:528:DyaK1cXksVSqsL0%3D Occurrence Handle9657153

    Article  CAS  PubMed  Google Scholar 

  • I.E. Wertz K.M. O’Rourke Z. Zhang D. Dornan D. Arnott R.J. Deshaies V.M. Dixit (2004) ArticleTitleHuman de-etiolated-1 regulates c-Jun by assembling a CUL4A ubiquitin ligase Science 303 1371–1374 Occurrence Handle10.1126/science.1093549 Occurrence Handle1:CAS:528:DC%2BD2cXhsFyrtb4%3D Occurrence Handle14739464

    Article  CAS  PubMed  Google Scholar 

  • Y. Yanagawa J.A. Sullivan S. Komatsu G. Gusmaroli G. Suzuki J. Yin T. Ishibashi Y. Saijo V. Rubio S. Kimura J. Wang X.W. Deng (2004) ArticleTitleArabidopsis COP10 forms a complex with DDB1 and DET1 in vivo and enhances the activity of ubiquitin conjugating enzymes Genes Dev. 18 2172–2181 Occurrence Handle10.1101/gad.1229504 Occurrence Handle1:CAS:528:DC%2BD2cXnsFWksrg%3D Occurrence Handle15342494

    Article  CAS  PubMed  Google Scholar 

  • M.W. Young S.A. Kay (2001) ArticleTitleTime Zones: a comparative genetics of circadian clocks Nat. Rev.-Genet. 2 702–715 Occurrence Handle10.1038/35088576 Occurrence Handle1:CAS:528:DC%2BD3MXmvV2hurc%3D Occurrence Handle11533719

    Article  CAS  PubMed  Google Scholar 

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Correspondence to Isabelle A. Carré.

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Song, HR., Carré, I.A. DET1 regulates the proteasomal degradation of LHY, a component of the Arabidopsis circadian clock. Plant Mol Biol 57, 761–771 (2005). https://doi.org/10.1007/s11103-005-3096-z

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