Skip to main content

Advertisement

Log in

Functional traits reveal the presence and nature of multiple processes in the assembly of marine fish communities

  • Community ecology – original research
  • Published:
Oecologia Aims and scope Submit manuscript

Abstract

Functional traits can be used to identify the importance of various community assembly mechanisms such as ecological drift, environmental filtering, and limiting similarity. These processes act in concert, not isolation, and different processes may act upon separate traits, potentially concealing the ecological signal of one or more of the mechanisms. Nine functional attributes of marine fish were used to identify changes in the importance of various mechanisms in the assembly of marine fish communities over a latitudinal gradient along the Western Australian coast. Complementary null modelling approaches were used to test the relative importance of assembly processes (ecological drift, environmental filtering, and limiting similarity) in structuring fish communities. Ecological drift was found to be a major driver of the structure of fish communities, and dispersal limitation was strongest in the tropical region, with homogenising dispersal strongest in the temperate region. Dispersion of functional traits identified environmental filtering acting on most traits incorporated in this study, in addition to limiting similarity acting on traits associated with acquisition of trophic resources. The coexistence of Western Australian marine fishes thus results from concurrent ecological drift, environmental filtering, and limiting similarity structuring the communities. The observed ecological drift may be the result of priority effects and/or context-dependent biotic interactions. Both niche complementarity and predator avoidance may be the drivers of the observed limiting similarity in the communities.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

References

  • Allen GR, Swainston R (1988) The marine fishes of North–Western Australia: a field guide for anglers and divers. Western Australian Museum

  • Anderson MJ (2001) A new method for non-parametric multivariate analysis of variance. Austral Ecol 26:32–46

    Google Scholar 

  • Beauchard O, Veríssimo H, Queirós A, Herman P (2017) The use of multiple biological traits in marine community ecology and its potential in ecological indicator development. Ecol Ind 76:81–96

    Google Scholar 

  • Borcard D, Gillet F, Legendre P (2011) Numerical ecology with R. Springer Verlag, New York

    Google Scholar 

  • Botta-Dukát Z, Czúcz B (2016) Testing the ability of functional diversity indices to detect trait convergence and divergence using individual-based simulation. Methods Ecol Evol 7:114–126

    Google Scholar 

  • Bradbury IR, Laurel B, Snelgrove PVR, Bentzen P, Campana SE (2008) Global patterns in marine dispersal estimates: the influence of geography, taxonomic category and life history. Proc R Soc B Biol Sci 275:1803–1809. https://doi.org/10.1098/rspb.2008.0216

    Article  Google Scholar 

  • Breder CM, Rosen DE (1966) Modes of reproduction in fishes. T.F.H Publications, Neptune City

    Google Scholar 

  • Brown JH (2014) Why marine islands are farther apart in the tropics. Am Nat 183:842–846

    PubMed  Google Scholar 

  • Cappo M, Speare P, De’ath G (2004) Comparison of baited remote underwater video stations (BRUVS) and prawn trawls for assessments of fish biodiversity in inter reefal areas of the Great Barrier Reef Marine Park. J Exp Mar Biol Ecol 302:123–152

    Google Scholar 

  • Cavender-Bares J, Kozak KH, Fine PV, Kembel SW (2009) The merging of community ecology and phylogenetic biology. Ecol Lett 12:693–715

    PubMed  Google Scholar 

  • Chamberlain SA, Bronstein JL, Rudgers JA (2014) How context dependent are species interactions? Ecol Lett 17:881–890

    PubMed  Google Scholar 

  • Chase JM, Kraft NJB, Smith KG, Vellend M, Inouye BD (2011) Using null models to disentangle variation in community dissimilarity from variation in a-diversity. Ecosphere 2:1–11

    Google Scholar 

  • Chust G et al. (2016) Dispersal similarly shapes both population genetics and community patterns in the marine realm. Scientific reports 6

  • Cowman PF, Parravicini V, Kulbicki M, Floeter SR (2017) The biogeography of tropical reef fishes: endemism and provinciality through time. Biol Rev 92:2112–2130

    PubMed  Google Scholar 

  • Feng M, Waite A, Thompson P (2009) Climate variability and ocean production in the Leeuwin current system off the west coast of Western Australia. J R Soc West Aust 92:67–81

    Google Scholar 

  • Fine PVA, Kembel SW (2011) Phylogenetic community structure and phylogenetic turnover across space and edaphic gradients in western Amazonian tree communities. Ecography 34:552–565. https://doi.org/10.1111/j.1600-0587.2010.06548.x

    Article  Google Scholar 

  • Fitzgerald DB, Winemiller KO, Sabaj Pérez MH, Sousa LM (2017) Using trophic structure to reveal patterns of trait-based community assembly across niche dimensions. Funct Ecol 31:1135–1144

    Google Scholar 

  • Ford BM, Roberts JD (2018) Latitudinal gradients of dispersal and niche processes mediating neutral assembly of marine fish communities. Mar Biol 165:94. https://doi.org/10.1007/s00227-018-3356-5

    Article  Google Scholar 

  • Ford BM, Stewart BA, Roberts JD (2017) Species pools and habitat complexity define west Australian marine fish community composition. Mar Ecol Prog Ser 574:157–166. https://doi.org/10.3354/meps12167

    Article  Google Scholar 

  • Fukami T (2015) Historical contingency in community assembly: integrating niches, species pools, and priority effects. Annu Rev Ecol Evol Syst 46:1–23

    Google Scholar 

  • Gallien L (2017) Intransitive competition and its effects on community functional diversity. Oikos 126:615–623

    Google Scholar 

  • Geange SW, Poulos DE, Stier AC, McCormick MI (2017) The relative influence of abundance and priority effects on colonization success in a coral-reef fish. Coral Reefs 36:151–155. https://doi.org/10.1007/s00338-016-1503-3

    Article  Google Scholar 

  • Gomon MF, Bray DJ, Kuiter RH (2008) Fishes of Australia’s southern coast. Reed New Holland, Sydney

    Google Scholar 

  • Götzenberger L, Botta-Dukát Z, Lepš J, Pärtel M, Zobel M, Bello F (2016) Which randomizations detect convergence and divergence in trait-based community assembly? A test of commonly used null models. J Veg Sci 27:1275–1287

    Google Scholar 

  • Hackradt CW, Félix-Hackradt FC, García-Charton JA (2011) Influence of habitat structure on fish assemblage of an artificial reef in southern Brazil. Mar Environ Res 72:235–247

    CAS  Google Scholar 

  • Heino J, Melo AS, Siqueira T, Soininen J, Valanko S, Bini LM (2015) Metacommunity organisation, spatial extent and dispersal in aquatic systems: patterns, processes and prospects. Freshw Biol 60:845–869

    Google Scholar 

  • Hixon MA, Beets JP (1989) Shelter characteristics and caribbean fish assemblages: experiments with artificial reefs. Bull Mar Sci 44:666–680

    Google Scholar 

  • Hubbell SP (2001) The unified neutral theory of biodiversity and biogeography. Princeton University Press, Princeton

    Google Scholar 

  • Hutchins JB (2001) Biodiversity of shallow reef fish assemblages in Western Australia using a rapid censusing technique. Rec West Aust Mus 20:247–270

    Google Scholar 

  • Hutchins B, Swainston R (1986) Sea fishes of southern Australia: complete field guide for anglers and divers. Swainston Publishing, Perth

    Google Scholar 

  • Ingram T, Shurin JB (2009) Trait-based assembly and phylogenetic structure in northeast Pacific rockfish assemblages. Ecology 90:2444–2453

    PubMed  Google Scholar 

  • Johnson DW (2006) Predation, habitat complexity, and variation in density-dependent mortality of temperate reef fishes. Ecology 87:1179–1188

    PubMed  Google Scholar 

  • Jones MC, Cheung WWL (2018) Using fuzzy logic to determine the vulnerability of marine species to climate change. Glob Change Biol 24:e719–e731. https://doi.org/10.1111/gcb.13869

    Article  Google Scholar 

  • Jones GP, Syms C (1998) Disturbance, habitat structure and the ecology of fishes on coral reefs. Austral Ecol 23:287–297

    Google Scholar 

  • Kembel SW et al (2010) Picante: R tools for integrating phylogenies and ecology. Bioinformatics 26:1463–1464

    CAS  PubMed  Google Scholar 

  • Kendrick GA (1999) Western Australia. In: Andrew N (ed) Under southern seas—the ecology of Australia’s rocky reefs. University of New South Wales Press Ltd, Sydney, pp 50–57

    Google Scholar 

  • Kraft NJ et al (2011) Disentangling the drivers of β diversity along latitudinal and elevational gradients. Science 333:1755–1758

    CAS  PubMed  Google Scholar 

  • Kraft NJ, Adler PB, Godoy O, James EC, Fuller S, Levine JM (2015) Community assembly, coexistence and the environmental filtering metaphor. Funct Ecol 29:592–599

    Google Scholar 

  • Kulbicki M et al (2013) Global biogeography of reef fishes: a hierarchical quantitative delineation of regions. PLoS One 8:e81847

    PubMed  PubMed Central  Google Scholar 

  • Laliberté E, Legendre P (2010) A distance-based framework for measuring functional diversity from multiple traits. Ecology 91:299–305

    PubMed  Google Scholar 

  • Laliberté E, Legendre P, Shipley B (2014) FD: measuring functional diversity from multiple traits, and other tools for functional ecology. R package version 1.0-12

  • Last PR, Stevens JD (2009) Sharks and rays of Australia, 2nd edn. CSIRO Publishing, Collingwood

    Google Scholar 

  • Last PR, Lyne VD, Williams A, Davies CR, Butler AJ, Yearsley GK (2010) A hierarchical framework for classifying seabed biodiversity with application to planning and managing Australia’s marine biological resources. Biol Conserv 143:1675–1686

    Google Scholar 

  • Last PR, White WT, Gledhill DC, Pogonoski JJ, Lyne V, Bax NJ (2011) Biogeographical structure and affinities of the marine demersal ichthyofauna of Australia. J Biogeogr 38:1484–1496

    Google Scholar 

  • Leibold MA et al (2004) The metacommunity concept: a framework for multi-scale community ecology. Ecol Lett 7:601–613

    Google Scholar 

  • Lek E, Fairclough D, Platell M, Clarke K, Tweedley J, Potter I (2011) To what extent are the dietary compositions of three abundant, co-occurring labrid species different and related to latitude, habitat, body size and season? J Fish Biol 78:1913–1943

    CAS  PubMed  Google Scholar 

  • Losos JB (2008) Phylogenetic niche conservatism, phylogenetic signal and the relationship between phylogenetic relatedness and ecological similarity among species. Ecol Lett 11:995–1003

    PubMed  Google Scholar 

  • MacArthur R, Levins R (1967) The limiting similarity, convergence, and divergence of coexisting species. Am Nat 101:377–385

    Google Scholar 

  • Mason NWH, de Bello F, Mouillot D, Pavoine S, Dray S (2013) A guide for using functional diversity indices to reveal changes in assembly processes along ecological gradients. J Veg Sci 24:794–806. https://doi.org/10.1111/jvs.12013

    Article  Google Scholar 

  • Mayfield MM, Levine JM (2010) Opposing effects of competitive exclusion on the phylogenetic structure of communities. Ecol Lett 13:1085–1093

    PubMed  Google Scholar 

  • McGowran B, Li Q, Cann J, Padley D, McKirdy DM, Shafik S (1997) Biogeographic impact of the Leeuwin current in southern Australia since the late middle Eocene. Palaeogeogr Palaeoclimatol Palaeoecol 136:19–40

    Google Scholar 

  • Mittelbach GG, Schemske DW (2015) Ecological and evolutionary perspectives on community assembly. Trends Ecol Evol 30:241–247

    PubMed  Google Scholar 

  • Morton JK, Platell ME, Gladstone W (2008) Differences in feeding ecology among three co-occurring species of wrasse (Teleostei: Labridae) on rocky reefs of temperate Australia. Mar Biol 154:577–592

    Google Scholar 

  • Mouchet MA, Burns MD, Garcia AM, Vieira JP, Mouillot D (2013) Invariant scaling relationship between functional dissimilarity and co-occurrence in fish assemblages of the Patos Lagoon estuary (Brazil): environmental filtering consistently overshadows competitive exclusion. Oikos 122:247–257

    Google Scholar 

  • Mouillot D, Dumay O, Tomasini JA (2007) Limiting similarity, niche filtering and functional diversity in coastal lagoon fish communities. Estuar Coast Shelf Sci 71:443–456

    Google Scholar 

  • Mouillot D et al (2014) Functional over-redundancy and high functional vulnerability in global fish faunas on tropical reefs. Proc Natl Acad Sci 111:13757–13762

    CAS  PubMed  Google Scholar 

  • Murphy HM, Jenkins GP (2010) Observational methods used in marine spatial monitoring of fishes and associated habitats: a review. Mar Freshw Res 61:236–252

    CAS  Google Scholar 

  • Myers JA et al (2013) Beta-diversity in temperate and tropical forests reflects dissimilar mechanisms of community assembly. Ecol Lett 16:151–157

    PubMed  Google Scholar 

  • Nyström M (2006) Redundancy and response diversity of functional groups: implications for the resilience of coral reefs. AMBIO 35:30–35

    PubMed  Google Scholar 

  • Oksanen J et al (2017) Vegan: community ecology package. R package version 2.4-3. https://CRAN.R-project.org/package=vegan

  • Pécuchet L et al (2017) From traits to life-history strategies: deconstructing fish community composition across European seas. Glob Ecol Biogeogr 26:812–822

    Google Scholar 

  • Pérez-Matus A, Shima JS (2010) Disentangling the effects of macroalgae on the abundance of temperate reef fishes. J Exp Mar Biol Ecol 388:1–10

    Google Scholar 

  • Pérez-Matus A, Ferry-Graham LA, Cea A, Vásquez JA (2007) Community structure of temperate reef fishes in kelp-dominated subtidal habitats of northern Chile. Mar Freshw Res 58:1069–1085. https://doi.org/10.1071/MF06200

    Article  Google Scholar 

  • Phillips JA (2001) Marine macroalgal biodiversity hotspots: why is there high species richness and endemism in southern Australian marine benthic flora? Biodivers Conserv 10:1555–1577

    Google Scholar 

  • Platell M, Potter I (2001) Partitioning of food resources amongst 18 abundant benthic carnivorous fish species in marine waters on the lower west coast of Australia. J Exp Mar Biol Ecol 261:31–54

    PubMed  Google Scholar 

  • R Core Team (2017) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. http://www.R-project.org/

  • Renema W et al (2008) Hopping hotspots: global shifts in marine biodiversity. Science 321:654–657

    CAS  PubMed  Google Scholar 

  • Ross ST (1986) Resource partitioning in fish assemblages: a review of field studies. Copeia 2:352–388

    Google Scholar 

  • Sale PF (1977) Maintenance of high diversity in coral reef fish communities. Am Nat 111:337–359

    Google Scholar 

  • Sale PF (1978) Coexistence of coral reef fishes—a lottery for living space. Environ Biol Fishes 3:85–102

    Google Scholar 

  • Spalding MD et al (2007) Marine ecoregions of the world: a bioregionalization of coastal and shelf areas. Bioscience 57:573–583

    Google Scholar 

  • Stegen JC et al (2013) Quantifying community assembly processes and identifying features that impose them. ISME J 7:2069–2079. https://doi.org/10.1038/ismej.2013.93

    Article  PubMed  PubMed Central  Google Scholar 

  • Thresher RE (1984) Reproduction in reef fishes. T.F.H Publications, Neptune City

    Google Scholar 

  • Trisos CH, Petchey OL, Tobias JA (2014) Unraveling the interplay of community assembly processes acting on multiple niche axes across spatial scales. Am Nat 184:593–608

    PubMed  Google Scholar 

  • Vellend M (2010) Conceptual synthesis in community ecology. Q Rev Biol 85:183–206

    PubMed  Google Scholar 

  • Vellend M et al (2014) Assessing the relative importance of neutral stochasticity in ecological communities. Oikos 123:1420–1430

    Google Scholar 

  • Villéger S, Brosse S, Mouchet M, Mouillot D, Vanni MJ (2017) Functional ecology of fish: current approaches and future challenges. Aquat Sci 79:783–801

    Google Scholar 

  • Violle C et al (2007) Let the concept of trait be functional! Oikos 116:882–892

    Google Scholar 

  • Webb P (1984) Body form, locomotion and foraging in aquatic vertebrates. Am Zool 24:107–120

    Google Scholar 

  • Weiher E, Keddy PA (1995) Assembly rules, null models, and trait dispersion: new questions from old patterns. Oikos 74:159–164

    Google Scholar 

  • Wernberg T, Kendrick GA, Phillips JC (2003) Regional differences in kelp-associated algal assemblages on temperate limestone reefs in south–western Australia. Divers Distrib 9:427–441

    Google Scholar 

Download references

Acknowledgements

Data from Esperance, Bremer Bay, Albany, Broke Inlet, Cape Naturaliste, Rottnest Island, Jurien and the Abrolhos Islands were collected through funding provided by an Australian and Western Australian Government Natural Heritage Trust Strategic Project, ‘Securing Western Australia’s Marine Futures’. We thank South Coast Natural Resource Management for access to the data and the staff of the Marine Futures team who collected the data. Dampier data were collected for Woodside Energy, who is thanked for access to this data. Barrow Island data were collected for Chevron, who is thanked for providing access to this data. Ben Fitzpatrick is thanked for providing the Ningaloo data, Jock Clough is thanked for providing the Shark Bay data, and Helen Shortland-Jones is thanked for collating the data. We also thank Howard Choat for assistance in classifying fish trophic attributes on an early draft. This manuscript was greatly improved through the comments of two anonymous reviewers. Fish images in Fig. 1 sourced from http://www.onlinewebfonts.com.

Author information

Authors and Affiliations

Authors

Contributions

BF conceived and designed the study, performed the analyses, and wrote the manuscript. JDR provided editorial advice.

Corresponding author

Correspondence to Benjamin M. Ford.

Additional information

Communicated by Deron E. Burkepile.

Electronic supplementary material

Below is the link to the electronic supplementary material.

Supplementary material 1 (PDF 4354 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Ford, B.M., Roberts, J.D. Functional traits reveal the presence and nature of multiple processes in the assembly of marine fish communities. Oecologia 192, 143–154 (2020). https://doi.org/10.1007/s00442-019-04555-1

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00442-019-04555-1

Keywords

Navigation