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Homology of functionally diverse proteins

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Summary

Disulphide-rich proteins of widely differing functions were aligned with the aid of their half-cystinyl residues. This led to the grouping of ribonuclease, phospholipase A, lysozyme, snake venom toxins, bee and scorpion venom peptides, and the plant proteins potatoe carboxypeptidase inhibitor, ragweed pollen allergen, mistletoe toxins and pineapple sulfhydryl protease inhibitor into one super-family of proteins. Very few deletions/insertions were needed to effect alignment and probabilities were calculated for random occurrence of the matches that were found.

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References

  • Adelson, J.W. (1971). Nature 229, 321–325

    Google Scholar 

  • Ambler, R.P., Meyer, T.E., Kamen, M.D. (1976). Proc. Natl. Acad. Sci.73, 472–475

    Google Scholar 

  • Barker, W.C., Dayhoff, M.O. (1972). In: Atlas of protein sequence and structure, M.O. Dayhoff, ed., Vol. 5, pp. 101–110. Washington, D.C.: National Biomedical Research Foundation

    Google Scholar 

  • Barnard, E.A., Cohen, M.S., Gold, M.H., Kim, J.K. (1972). Nature240, 395–398

    Google Scholar 

  • Barnett, D.R., Lee, T.H., Bowmann, B.H. (1972). Biochemistry11, 1189–1200

    Google Scholar 

  • Botes, D.P., Viljoen, C.C. (1974). J. Biol. Chem.249, 3827–3835

    Google Scholar 

  • Brew, K., Castellino, F.J., Vanaman, T.C., Hill, R.L. (1970). J. Biol. Chem.245, 4570–4582

    Google Scholar 

  • Brew, K., Vanaman, T.C., Hill, R.L. (1967). J. Biol. Chem.242, 3747–3749

    Google Scholar 

  • Canfield, R. (1963). J. Biol. Chem.238, 2698–2707

    Google Scholar 

  • Carlsson, F.H.H., (1974). Biochem. Biophys. Res. Commun.59, 269–276

    Google Scholar 

  • Collins, J.H. (1974). Biochem. Biophys. Res. Commun.58, 301–308

    Google Scholar 

  • Creighton, T.E. (1974). J. Mol. Biol.87, 603–624

    Google Scholar 

  • Creighton, T.E. (1975). J. Mol. Biol.95, 167–199

    Google Scholar 

  • Dayhoff, M.O., ed., (1972). Atlas of protein sequence and structure, Vol. 5. Washington, D.C.: National Biomedical Research Foundation

    Google Scholar 

  • Dayhoff, M.O. (1974). Fed. Proc.33, 2314

    Google Scholar 

  • de Haas, G.H., Slotboom, A.J., Bonsen, P.P.M., Nieuwenhuizen, W., Van Deenen, L.L.M., Maroux, S., Dlouha, V., Desnuelle, P. (1970b). Biochim. Biophys. Acta221, 54–61

    Google Scholar 

  • de Haas, G.H., Slotboom, A.J., Bonsen, P.P.M., Van Deenen, L.L.M., Maroux, S., Puigserver, A., Desnuelle, P. (1970a). Biochim. Biophys. Acta221, 31–53

    Google Scholar 

  • de Haën, C. Neurath, H., Teller, D.C. (1975). J. Mol. Biol.92, 225–259

    Google Scholar 

  • Evenberg, A., Meijer, H., Gaastra, W., Verheij, H.M., de Haas, G.H. (1977). J. Biol. Chem., in press

  • Fitch, W.M. (1966). J. Mol. Biol.16, 9–16

    Google Scholar 

  • Fitch, W.M. (1970). J. Mol. Biol.49, 1–14

    Google Scholar 

  • Fitch, W.M. (1973). Ann. Rev. Genet.7, 343–380

    Google Scholar 

  • Florkin, M. (1975). In: Comprehensive Biochemistry, M. Florkin, E.H. Stotz, eds., Vol. 29B, pp. 79–229. Amsterdam: Elsevier

    Google Scholar 

  • Frazier, W.A., Angeletti, R.H., Bradshaw, R.A. (1972). Science176, 482–488

    Google Scholar 

  • Halpert, J., Eaker, D. (1975). J. Biol. Chem.250, 6990–6997

    Google Scholar 

  • Hartley, B.S. (1974). Symp. Soc. Gen. Microbiol.24, 151–182

    Google Scholar 

  • Hass, G.M., Nau, H., Biemann, K., Grahn, D.T., Ericsson, L.H., Neurath, H. (1975). Biochemistry14, 1335–1342

    Google Scholar 

  • Haux, P. (1969). Hoppe Seyler's Z. physiol. Chem.350, 536–546

    Google Scholar 

  • Hunt, L.T., Barker, W.C., Dayhoff, M.O. (1974). Biochem. Biophys. Res. Commun.60, 1020–1028

    Google Scholar 

  • Joubert, F.J. (1975). Eur. J. Biochem.52, 539–554

    Google Scholar 

  • Kretsinger, R.H. (1972). Nature New Biol.240, 85–86

    Google Scholar 

  • Laure, C.J. (1975). Hoppe-Seyler's Z. Physiol. Chem.356, 213–215

    Google Scholar 

  • Magnusson, S., Petersen, T.E., Sottrup-Jensen, L., Claeys, H. (1975). In: Proteases and biological control, E. Reich, D.B. Rifkin, E. Shaw, eds., pp. 123–149. Cold Spring Harbor Laboratory

  • Mak, A.S., Jones, B.L. (1976) Can. J. Biochem.22, 835–842

    Google Scholar 

  • Mebs, D., Narita, K., Iwanaga, S., Samejima, Y., Lee, C.Y. (1972). Hoppe-Seyler's Z. physiol. Chem. 353, 243–262

    Google Scholar 

  • Mole, L.E., Goodfriend, L., Lapkoff, C.B., Kehoe, J.M., Capra, J.D. (1975). Biochemistry14, 1216–1220

    Google Scholar 

  • Olson, T., Samuelsson, G. (1972). Acta Chem. Scand.26, 585–595

    Google Scholar 

  • Pauling, L., Zuckerkandl, E. (1963). Acta Chem. Scand.17, S9-S16

    Google Scholar 

  • Poljak, R.J., Amsel, L.M., Avey, H.P., Chen, B.L., Phizackerley, R.P., Saul, F. (1973). Proc. Natl. Acad. Sci.70, 3305–3310

    Google Scholar 

  • Quiocho, F.A., Lipscomb, W.N. (1971). Advances in protein chemistry (Edsall,J.T., Anfinsen, C.B., Richards, F.M., eds., Vol.25, pp. 1–78. New York: Academic Press

    Google Scholar 

  • Reddy, M.N., Keim, P.S., Heinrikson, R.L., Kézdy, F.J. (1975). J. Biol. Chem.250, 1741–1750

    Google Scholar 

  • Richardson, J.S., Richardson, D.C., Thomas, K.A., Silverton, E.W., Davies, D.R. (1976). J. Mol. Biol.102, 221–235

    Google Scholar 

  • Rochat, H., Rochat, C., Miranda, F., Lissitzky, S., Edman, P. (1970). Eur. J. Biochem.17, 262–266

    Google Scholar 

  • Rochat, H., Rochat, C., Sampieri, F., Miranda, F., Lissitzky, S. (1972). Eur. J. Biochem.28, 381–388

    Google Scholar 

  • Rossmann, M.G., Argos, P. (1976). J. Mol. Biol.105, 75–95

    Google Scholar 

  • Rossmann, M.G., Moras, D., Olsen, K.W. (1974). Nature250, 194–199

    Google Scholar 

  • Schmid, M.F., Herriot, J.R. (1976). J. Mol. Biol.103, 175–190

    Google Scholar 

  • Schwabe, C., McDonald, J.K., Steinetz, B.G. (1976). Biochem. Biophys. Res. Commun.70, 397–405

    Google Scholar 

  • Shipolini, R.A., Callewaert, G.L., Cottrell, R.C., Vernon, C.A. (1974a). Eur. J. Biochem.48, 465–476

    Google Scholar 

  • Shipolini, R.A., Doonan, S., Vernon, C.A. (1974b). Eur. J. Biochem.48, 477–483

    Google Scholar 

  • Smyth, D.G., Stein, W.H., Moore, S., (1963). J. Biol. Chem.238, 227–234

    Google Scholar 

  • Strydom, D.J. (1973). Syst. Zool.22, 596–608

    Google Scholar 

  • Weeds, A.G., McLachlan, A.D. (1974). Nature252, 646–649

    Google Scholar 

  • Weise, K.H.K., Carlsson, F.H.H., Joubert, F.J., Strydom, D.J. (1973). Hoppe-Seyler's Z. physiol. Chem.354, 1317–1326

    Google Scholar 

  • Yčas, M. (1976). J. Mol. Evol.7, 215–244

    Google Scholar 

  • Zuckerkandl, E. (1975). J. Mol. Evol.7, 1–57

    Google Scholar 

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Strydom, D.J. Homology of functionally diverse proteins. J Mol Evol 9, 349–361 (1977). https://doi.org/10.1007/BF01796098

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  • DOI: https://doi.org/10.1007/BF01796098

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