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Characterization of the hog cholera virus 5′ terminus

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Abstract

Hog cholera virus (HoCV) 5′ terminus of the ALD and GPE(−) strains were analyzed by using rapid amplification of cDNA end method (5′RACE). An additional nine nucleotides were found at the 5′ termini of genomic RNA in the ALD and GPE(−) strains of HoCV. These nine nucleotides were also conserved in BVDV and were suggested to form a hairpin structure at the 5′ terminus by computer-assisted analysis. It seems possible that the secondary structure and/or the 5′ terminus sequence has a significant role in the HoCV virus genome.

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Katayama, K., Kurihara, C., Fukushi, S. et al. Characterization of the hog cholera virus 5′ terminus. Virus Genes 10, 185–187 (1995). https://doi.org/10.1007/BF01702600

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