Summary
Tn5 was introduced into Azotobacter vinelandii on a suicide vector, pGS9. Three Nif- mutants were found to carry Tn5 in nifH (MV6), in nifN (MV22), and in or near nifM (MV21), from the results of hybridisation experiments. For MV21 and MV22 this was also shown by complementation with the nif genes of Klebsiella pneumoniae on pRD1. MV6 failed to synthesis the nifH, D and K gene products. MV6 and MV22 fixed nitrogen in the absence of supplied molybdenum while mutant MV21 did not, suggesting that the nifM gene product may be required for the alternative nitrogenase system synthesised in azotobacteria under conditions of molybdenum deprivation. Reconstitution experiments with mutant extracts showed that MV22 (nifN -) lacked the FeMo cofactor and that MV21 (NifM-) synthesised inactive Fe protein. These biochemical phenotypes are identical to those of the K. pneumoniae nifN and nifM mutants, respectively, demonstrating that these genes have the same function in both K. pneumoniae and A. vinelandii. Complementation of the A. vinelandii mutants with pLAFR1 gene banks of A. vinelandii or a. chroococcum yielded three cosmids of interest. pLV10 complemented UW91, a nifH mutant, and corrected the defect in MV6 after recombination with the mutant genome. It also carried nifD (but not nifK) and about 18 kb of DNA upstream from nifH. pLV1 from the A. vinelandii gene bank complemented both MV21 and MV22 as did pLC11, isolated from the A. chroococcum gene bank. Both pLV1 and pLC11 carried part of the nif cluster downstream of nifHDK which also includes nifEN and nifMVS on about 22 kb of DNA.
Similar content being viewed by others
References
Bishop PE, Brill WJ (1977) Genetic analysis of Azotobacter vinelandii mutant strains unable to fix nitrogen. J Bacteriol 130:954–956
Bishop PE, Jarlenski DML, Hetherington DR (1980) Evidence for an alternative nitrogen fixation system in Azotobacter vinelandii. Proc Natl Acad Sci USA 77:7342–7346
Bishop PE, Rizzo TM, Bott KF (1985) Molecular cloning of nif DNA from Azotobacter vinelandii. J Bacteriol 162:21–28
Bishop PE, Eady RR (1985) Nitrogen fixation by a nifHDK deletion strain of Azotobacter vinelandii. In: Evans HJ, Bottomley PJ, Newton WE (eds) Nitrogen fixation research progress. Martinus Nijhoff Publishers, Dordrecht, p 622
Brigle K, Newton WE, Dean D (1985) Complete nucleotide sequence of the Azotobacter vinelandii nitrogenase structural gene cluster. Gene 37:37–44
Brill WJ, Steiner AK, Shah VK (1974) Effect of molybdenum starvation and tungsten on the synthesis of nitrogenase components in Klebsiella pneumoniae. J Bacteriol 118:986–989
Cannon FC, Postgate JR (1976) Expression of Klebsiella nitrogen fixation genes (nif) in Azotobacter. Nature 260:271–272
Cannon F, Postgate J (1983) Expression of Klebsiella nitrogen fixation genes in Azotobacter—a caution. Nature 306:290
Cannon FC, Riedel GE, Ausubel FM (1979) Overlapping sequences of Klebsiella pneumoniae nif DNA cloned and characterized. Mol Gen Genet 174:59–66
Dean DR, Brigle KE (1985a) Azotobacter vinelandii nifD-and nifE-encoded polypeptides share structural homology. Proc Natl Acad Sci USA 82:57220–57223
Dean DR, Brigle KE (1985b) The Azotobacter vinelandii nifD and nifK encoded polypeptides share striking structural homology with the nifE and nifN encoded polypeptides. In: Evans HJ, Bottomley PJ, Newton WE (eds) Nitrogen fixation research progress. Martinus Nijhoff Publishers, Dordrecht, p 153
Dixon RA (1984) The genetic complexity of nitrogen fixation. J Gen Microbiol 130:2745–2755
Dixon R, Cannon F, Kondorosi A (1976) Construction of a P plasmid carrying nitrogen fixation genes from Klebsiella pneumoniae. Nature 260:268–271
Dixon R, Kennedy C, Kondorosi A, Krishnapillai V, Merrick M (1977) Complementation analysis of Klebsiella pneumoniae mutants defective in nitrogen fixation. Mol Gen Genet 157:189–198
Eady RR, Smith BE, Cook KA, Postgate JR (1972) Nitrogenase of Klebsiella pneumoniae: purification and properties of the component proteins. Biochem J 128:655–675
Eady RR, Robson RL (1984) Characteristics of N2 fixation in Mo-limited batch and continuous cultures of Azotobacter vinelandii. Biochem J 224:853–862
Evans D, Jones R, Woodley P, Kennedy C, Robson R (1985) nif gene organisation in Azotobacter chroococcum. In: Evans HJ, Bottomley PJ, Newton WE (eds) Nitrogen fixation research progress. Martinus Nifhoff Publishers, Dordrecht, p 506
Figurski D, Helinski DR (1979) Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans. Proc Natl Acad Sci USA 76:1648–1652
Friedman M, Long SR, Brown SE, Buikema WJ, Ausubel FM (1982) Construction of a broad host range cosmid cloning vector and its use in the genetic analysis of Rhizobium mutants. Gene 18:289–292
Gordon JK, Brill WJ (1972) Mutants that produce nitrogenase in the presence of ammonia. Proc Natl Acad Sci USA 69:3501–3503
Helfrich RJ, Ligon JM, Upchurch RG (1985) Identification and organisation of nif genes of Azotobacter vinelandii. In: Evans HJ, Bottomley PJ, Newton WE (eds) Nitrogen fixation research progress. Martinus Nijhoff Publishers, Dordrecht, p 507
Howard KS, McLean PA, Hansen FB, Lemley PV, Koblan KS, Orme-Johnson WJ (1986) Klebsiella pneumoniae nifM gene product is required for stabilization and activation of nitrogenase iron protein in Escherichia coli. J Biol Chem 261:772–778
Jacobson MR, Premakumar R, Bishop PE (1986) Transcriptional regulation of nitrogen fixation by molybdenum in Azotobacter vinelandii. J Bacteriol 167:480–486
Joerger Rd, Kopczynski JB, Bishop PE (1985) Tn5-induced Nif- mutants of Azotobacter vinelandii. In: Evans HJ, Bottomley PJ, Newton WE (eds) Nitrogen fixation research progress. Martinus Nijhoff Publishers, Dordrecht, p 525
Jones R, Woodley P, Robson R (1984) Cloning and organisation of some genes for nitrogen fixation from Azotobacter chroococcum and their expression in Klebsiella pneumoniae. Mol Gen Genet 197:318–327
Kahn D, Hawkins M, Eady RR (1982) Nitrogen fixation in Klebsiella pneumoniae: nitrogenase levels and the effect of added molybdate on nitrogenase derepressed under molybdenum deprivation. J Gen Microbiol 128:779–787
Kennedy C (1977) Linkage map of the nitrogen fixation (nif) genes in Klebsiella pneumoniae. Mol Gen Genet 157:199–204
Kennedy C, Robson R (1983) Activation of nif gene expression in Azotobacter by the nifA gene product of Klebsiella pneumoniae. Nature 301:626–628
Kennedy C, Drummond MH (1985) Use of cloned nif regulatory elements from Klebsiella pneumoniae to examine nif regulation in Azotobacter vinelandii. J Gen Microbiol 131:1787–1795
Kennedy C, Robson R, Jones R, Woodley P, Evans D, Bishop P, Eady R, Gamal R, Humphrey R, Ramos J, Dean D, Brigle K, Toukdarian A, Postgate J (1985) Genetic and physical characterisation of nif and ntr genes in Azotobacter chroococcum and A. vinelandii. In: Evans HJ, Bottomley PJ, Newton WE (eds) Nitrogen fixation research progress. Martinus Nijhoff Publishers, Dordrecht, p 469
Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning. Cold Spring Harbor Laboratory, New York
Merrick M, Filser M, Dixon R, Elmerich C, Sibold L, Houmard J (1980) The use of translocatable genetic elements to construct a fine-structure map of the Klebsiella pneumoniae nitrogen fixation (nif) gene cluster. J Gen Microbiol 117:509–520
Newton JW, Wilson PW, Burris RH (1953) Direct demonstration of ammonia as an intermediate in nitrogen fixation by Azotobacter. J Biol Chem 204:445–451
O'Neill EA, Kiely GM, Bender RA (1984) Transposon Tn5 encodes streptomycin resistance in nonenteric bacteria. J Bacteriol 159:388–389
Premakumar R, Lemos EM, Bishop PE (1984) Evidence for two dinitrogenase reductases under regulatory control by molybdenum in Azotobacter vinelandii. Biochim Biophys Acta 797:64–70
Roberts GP, MacNeil T, MacNeil D, Brill WJ (1978) Regulation and characterisation of protein products coded by the nif (nitrogen fixation) genes of Klebsiella pneumoniae. J Bacteriol 136:267–279
Robinson A, Burgess BK, Dean DR (1986) Activity, reconstitution and accumulation of nitrogenase components in Azotobacter vinelandii mutant strains containing defined deletions within the nitrogenase structural gene cluster. J Bacteriol 166:180–186
Robson R, Jones R, Woodley P, Evans D (1985) The DNA sequence of nitrogenase genes from Azotobacter chroococcum. In: Evans HJ, Bottomley PJ, Newton WE (eds) Nitrogen fixation research progress. Martinus Nijhoff Publishers, Dordrecht, p 514
Robson R, Woodley P, Jones R (1986) Second gene (nifH *) coding for a nitrogenase iron protein in Azotobacter chroococcum is adjacent to a gene coding for a ferredoxin-like protein. EMBO J 5:1159–1163
Robson RL (1986) Nitrogen fixation in strains of Azotobacter chroococcum bearing deletions of a cluster of genes coding for nitrogenase. Arch Microbiol 146:74–79
Selvaraj G, Iyer VN (1983) Suicide plasmid vehicles for insertion mutagenesis in Rhizobium meliloti and related bacteria. J Bacteriol 156:1292–1300
Shah VK, Davis LC, Gordon JK, Orme-Johnson WH, Brill WJ (1973) Nitrogenase III. Nitrogenaseless mutants of Azotobacter vinelandii: Activities, cross-reactions and epr spectra. Biochim Biophys Acta 292:246–255
Sibold L (1982) The polar effect on nifM of mutations in the nifU,-S,-V genes of Klebsiella pneumoniae depends on their plasmid or chromosomal location. Mol Gen Genet 186:569–571
Smith BE (1980) Studies on the iron-molybdenum cofactor from the nitrogenase Mo-Fe protein of Klebsiella pneumoniae. In: Newton WE, Otsuka S (eds) Molybdenum chemistry of biological significance. Plenum Press, London, pp 179–190
Author information
Authors and Affiliations
Additional information
Communicated by J. Schell
Rights and permissions
About this article
Cite this article
Kennedy, C., Gamal, R., Humphrey, R. et al. The nifH, nifM and nifN genes of Azotobacter vinelandii: Characterisation by Tn5 mutagenesis and isolation from pLAFR1 gene banks. Molec. Gen. Genet. 205, 318–325 (1986). https://doi.org/10.1007/BF00430445
Received:
Issue Date:
DOI: https://doi.org/10.1007/BF00430445