Skip to main content
Log in

Characterisation of a short interspersed repeat (Mermaid) that has family members on human chromosome 21 and elsewhere in the human genome

  • Original Investigation
  • Published:
Human Genetics Aims and scope Submit manuscript

Abstract

To understand the architecture of the human genome, we need a complete definition of all the repeat sequence families, as these make up the majority of human DNA. We have isolated a small DNA fragment from human chromosome 21 and have used sequence analysis of this fragment to uncover a new low copy repeat element of approximately 300 bp that we term the Mermaid repeat. This repeat is related to, but is different from, the MER 12 repeat and is interspersed in the genome. Mermaid family members that we have studied are between 81%–87% identical to our preliminary consensus sequence. Therefore, we have added a new member to the large collection of human repetitive elements. In addition, we have mapped a Mermaid repeat to a telomeric position on the long arm of human chromosome 21, at 21q22.3

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Similar content being viewed by others

References

  • Adams MD, Kerlavage AR, Fields C, Venter JC (1993) 3400 expressed sequence tags identify diversity of transcripts from human brain. Nature Genet 4:256–267

    Google Scholar 

  • Gardiner K, Watkins P, Munke M, Drabkin H, Jones C, Patterson D (1988) Partial physical map of human chromosome 21. Somat Cell Mol Genet 14:623–638

    Google Scholar 

  • Garret M, McHendry-Rinde B, Spickofsky N, Margolskee RF (1992) Isolation of a clone which induces expression of the gene encoding the human tumor necrosis factor receptor. Gene 111:215–222

    Google Scholar 

  • Kaplan DJ, Jurka J, Solus JF, Duncan CH (1991) Medium reiteration frequency repetitive sequences in the human genome. Nucleic Acids Res 19:4731–4738

    Google Scholar 

  • Korn B, Sedlacek Z, Manca A, Kioschis P, Konecki D, Lehrach H, Poustka A (1992) A strategy for the selection of transcribed sequences in the Xq28 region. Hum Mol Genet 1:235–242

    Google Scholar 

  • Ledbetter SA, Nelson DL, Warren ST, Ledbetter DH (1990) Rapid isolation of DNA probes within specific chromosome regions by interspersed repetitive sequence polymerase chain reaction. Genomics 6:475–481

    Google Scholar 

  • Littlefield JW (1966) The use of drug-resistant markers to study the hybridization of mouse fibroblasts. Exp Cell Res 41:190–196

    Google Scholar 

  • Liu P, Legerski R, Siciliano MJ (1989) Isolation of human transcribed sequences from human-rodent somatic cell hybrids. Science 246:813–815

    Google Scholar 

  • Liu P, Parryman MB, Liao W, Siciliano MJ (1992) Efficiency and limitations of the hn-cDNA library approach for the isolation of human transcribed genes from hybrid cells. Somal Cell Mol Genet 18:7–18

    Google Scholar 

  • Nelson DL, Ledbetter SA, Corbo L, Victoria MF, Ramirez-Solis R, Webster TD, Ledbetter DH, Caskey CT (1989) Alu polymerase chain reaction: a method for rapid isolation of humanspecific sequences from complex DNA sources. Proc Natl Acad Sci USA 86:6686–6690

    Google Scholar 

  • Van Keuren ML, Watkins PC, Drabkin HA, Jabs EW, Gusella JF, Patterson D (1986) Regional localization of DNA sequences on chromosome 21 using somatic cell hybrids. Am J Hum Genet 38:793–804

    Google Scholar 

  • Wang Y, Macke JP, Merbs SL, Zack DJ, Klaunberg B (1992) A locus control region adjacent to the human red and green visual pigment genes. Neuron 9:429–440

    Google Scholar 

  • Yulug IG, Egan SE, See CG, Fisher EMC (1994) Mapping GRB2, signal transduction gene in the human and the mouse. Genomics 22:313–318

    Google Scholar 

  • Yulug IG, Katsanis N, Belleroehe J de, Collinge J, Fisher EMC (1995) An improved protocol for the analysis of SOD1 gene mutations, and a new mutation in exon 4. Hum Moi Genet 6:1101–1104

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Hoyle, J., Yulug, I.G., Johnstone, K. et al. Characterisation of a short interspersed repeat (Mermaid) that has family members on human chromosome 21 and elsewhere in the human genome. Hum Genet 97, 117–120 (1996). https://doi.org/10.1007/BF00218845

Download citation

  • Received:

  • Revised:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00218845

Keywords

Navigation