Skip to main content
Log in

Molten globule intermediates and protein folding

  • Invited Review
  • Published:
European Biophysics Journal Aims and scope Submit manuscript

Abstract

The background to the concept of the term “molten globule” as a description of intermediates observed in the folding of globular proteins is discussed. These compact intermediates are characterised by certain properties including the presence of secondary structure and considerable conformational mobility compared to the native, functional state. Those intermediates that are thermodynamically stable under mild denaturing conditions have many features in common with the transient intermediates that accumulate significantly during the process of folding. Attention is drawn to cases where the two types are however distinguished on grounds of their Stokes radius, in which cases there is currently no direct evidence for the involvement of the stable intermediates on the folding pathway. Experimental evidence relating to the early stages in folding is reviewed and compared, highlighting the temporal relationship between general collapse of the polypeptide chain and the formation of secondary structure. The continued use of the term “molten globule” is recommended where the minimum essential structural criteria for this state are met.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Abbreviations

ANS:

8-anilino-1-naphthalenesulphonic acid

CD:

circular dichroism

GEC:

gel exclusion chromatography

NMR:

nuclear magnetic resonance

UGGE:

urea gradient gel electrophoresis

UV:

ultraviolet

References

  • Adams B, Burgess RJ, Carrey EA, Mackintosh IR, Mitchinson C, Thomas RM, Pain RH (1980) The role of folding units in the kinetic folding of globular proteins. In: Jaenicke R (ed) Protein folding. Elsevier/North Holland, Amsterdam pp 447–467

    Google Scholar 

  • Baum J, Dobson CM, Evans PA, Hanley C (1989) Characterisation of a partly folded protein by NMR methods: studies on the molten globule state of guinea pig α-lactalbumin. Biochemistry 28:7–13

    Google Scholar 

  • Blond-Elguindi S, Goldberg ME (1990) Kinetic characterisation of early immunoreactive intermediates during the refolding of guanidine unfolded Escherichia coli tryptophan synthase β2, subunits. Biochemistry 29:2409–2417

    Google Scholar 

  • Bycroft M, Matouschek A, Kellis JT, Serrano L, Fersht AR (1990) Detection and characterisation of a folding intermediate in barnase by NMR. Nature 346:488–490

    Google Scholar 

  • Carrey EA, Pain RH (1978) Conformation of a stable intermediate on the folding pathway of Staphylococcus aureus penicillinase. Biochim Biophys Acta 553:12–22

    Google Scholar 

  • Craig S (1986) Critical residues in the folding of β-lactamase. PhD Thesis, University of Newcastle upon Tyne

  • Craig S, Schmeissner U, Wingfield P, Pain RH (1987) Conformation, stability and folding of interleukin 1β. Biochemistry 26:3570–3576

    Google Scholar 

  • Creighton TE, Pain RH (1980) Unfolding and refolding of Staphylococcus aureus penicillinase by urea gradient electrophoresis. J Mol Biol 137:4436

    Google Scholar 

  • Damaschun G, Germat Ch, Damaschun H, Bychkova VE, Ptitsyn OB (1986) Comparison of intramolecular packing of a protein in native and “molten globule” states. Int J Biol Macromol 8:226–230

    Google Scholar 

  • Dill KA (1990) Dominant forces in protein folding. Biochemistry 29:7133–7155

    Google Scholar 

  • Dolgikh DA, Gilmanshin RI, Brazhnikov EV, Bychkova VE, Semisotnov GV, Venyaminov SYu, Ptitsyn OB (1981) [ti]α3-lactalbumin: compact state with fluctuating tertiary structure. FEBS Lett 36: 311–315.

    Google Scholar 

  • Dolgikh DA, Kolomiets AP, Bolotina IA, Ptitsyn OB (1984) “Molten globule” state accumulates in carbonic anhydrase folding. FEBS Lett 165:88–92

    Google Scholar 

  • Dolgikh DA, Abaturov LV, Bolotina IA, Brazhnikov EV, Bychkova VE, Bushuev VN, Gilmanshin RI, Lebedev YuO, Semisotnov GV, Tiktopulo EI, Ptitsyn OB (1985) Compact state of a protein molecule with pronounced small-scale mobility: bovine α-lactalbumin. Fur Biophys J 13:109–121

    Google Scholar 

  • Feng M-F, Englander SW, Elöve GA, Wand AJ, Roder H (1990) Structural description of acid denatured cytochrome c by hydrogen exchange and 2D NMR. Biochemistry 29:10432–10437

    Google Scholar 

  • Finkelstein AV, Shaknovich EI (1989) Theory of cooperative transitions in protein molecules. II. Phase diagram for a protein molecule in solution. Biopolymers 28:1681–1694

    Google Scholar 

  • Garvey EP, Swank J, Matthews CR (1989) A hydrophobic cluster forms early in the folding of dihydrofolate reductase. Proteins: Struct Funct Genet 6:259–266

    Google Scholar 

  • Gast K, Zirwer D, Welfle H, Bychkova VE, Ptitsyn OB (1986) Quasielastic light scattering from human α-lactalbumin: comparison of molecular dimensions in native and “molten globule” states. Int J Biol Macromol 8:231–236

    Google Scholar 

  • Gilmanshin RI, Ptitsyn OB (1987) An early intermediate of refolding α-lactalbumin forms within 20 ms. FEBS Lett 223:327–329

    Google Scholar 

  • Goldberg ME, Semisotnov GV, Friguet B, Kuwajima K, Ptitsyn OB, Sugai S (1990) An early immunoreactive folding intermediate of the tryptophan synthase β2 subunit is a “molten globule”. FEBS Lett 263:51–56

    Google Scholar 

  • Goto Y, Fink AL (1989) Conformational states of β-lactamase: molten globule states at acidic and alkaline pH with high salt. Biochemistry 28:945–952

    Google Scholar 

  • Goto Y, Calciano LJ, Fink AL (1990a) Acid-induced folding of proteins. Proc Natl Acad Sci USA 87:573–577

    Google Scholar 

  • Goto Y, Takahashi N, Fink AL (1990b) Mechanism of acid-induced folding of proteins. Biochemistry 29:3480–3488

    Google Scholar 

  • Gruenewald B, Nicola CU, Lustig A, Schwarz G, Klump H (1979) Kinetics of the helix-coil transition of a polypeptide with non-ionic side groups, derived from ultrasonic relaxation measurements. Biophys Chem 9:137–147

    Google Scholar 

  • Ikai A, Tanford C (1973) Kinetics of unfolding and refolding of proteins. I. Mathematical analysis. J Mol Biol 73:145–164

    Google Scholar 

  • Ikeguchi M, Kuwajima M, Sugai S (1986) Evidence for identity between the equilibrium unfolding intermediate and a transient folding intermediate: a comparative study of the folding reactions of α-lactalbumin and lysozyme. Biochemistry 25:6965–6972

    Google Scholar 

  • Jeng M-F, Englander W, Elöve GA, Roder H (1991) Structural description of acid-denatured cytochrome c by NH exchange and 2D NMR (in press)

  • Kato S, Okamura M, Shimamoto N, Utiyama H (1981) Spectral evidence of a rapidly formed structural intermediate in the refolding kinetics of hen egg-white lysozyme. Biochemistry 20:1080–1085

    Google Scholar 

  • Kim PA, Baldwin RL (1982) Specific intermediates in the folding reactions of small proteins and the mechanism of protein folding. Ann Rev Biochem 51:459–489

    Google Scholar 

  • Kim PS, Baldwin RL (1990) Intermediates in the folding of small proteins. Ann Rev Biochem 59:631–660

    Google Scholar 

  • Kuwajima K (1977) A folding model of α-lactalbumin deduced from the three-state denaturation mechanism. J Mol Biol 114:241–258

    Google Scholar 

  • Kuwajima K (1989) The molten globule state as a clue for understanding the folding and co-operativity of globular protein structure. Proteins: Struct Funct Genet 6:87–103

    Google Scholar 

  • Kuwajima K, Hiraoka Y, Ikegushi M, Sugai S (1985) Comparison of the transient folding intermediates in lysozyme and α-lactalbumin. Biochemistry 24:874–881

    Google Scholar 

  • Kuwajima K, Yamaya H, Miwa S, Sugai S, Nagamura T (1987) Rapid formation of secondary structure framework in protein folding studied by stopped-flow circular dichroism. FEBS Lett 221:115–118

    Google Scholar 

  • Levinthal C (1968) Are there pathways for protein folding? J Chem Phys 65:44–45

    Google Scholar 

  • Matouschek A, Kellis JT, Serrano L, Bycroft M, Fersht AR (1990) Transient folding intermediates characterised by protein engineering. Nature 346:440–445

    Google Scholar 

  • Miranker A, Radford SE, Karplus M, Dobsen C (1991) Demonstration by NMR of folding domains in lysozyme. Nature 349:633–636

    Google Scholar 

  • Mitchinson C, Pain RH (1985) Effects of sulphate and urea on the stability and reversible unfolding of β-lactamase from Staphylococcus aureus. Implications for the folding pathway of β-lactamase. J Mol Biol 184:331–342

    Google Scholar 

  • Murry-Brelier A; Goldberg ME (1988) Kinetics of appearance of an early immunoreactive species during the refolding of acid denatured Escherichia coli tryptophan synthase β2 subunit. Biochemistry 27:7633–7640

    Google Scholar 

  • Ohgushi M, Wada A (1983) “Molten-globule state”: a compact form of globular proteins with mobile side-chains. FEBS Lett 164:21–24

    Google Scholar 

  • Ptitsyn OB (1973) Stepwise mechanism of self-organisation of protein molecules. Dokl Akad Nauk SSSR 213:473–475

    Google Scholar 

  • Pfeil W (1987) Is thermally denatured protein unfolded? The example of α-lactalbumin. Biochim Biophys Acta 911:114–116

    Google Scholar 

  • Pfeil W, Bychkova VE, Ptitsyn OB (1986) Physical nature of the phase transition in globular proteins. FEBS Lett 198:287–291

    Google Scholar 

  • Ptitsyn OB, Pain RH, Semisotnov GV, Zerovnik E, Razgulyaev DI (1990) Evidence for a molten globule state as a general intermediate in protein folding. FEBS Lett 262:20–24

    Google Scholar 

  • Robson B, Pain RH (1971) Analysis of the code relating sequence to conformation in proteins: possible implications for the mechanism of formation of helical regions. J Mol Biol 58:237–259

    Google Scholar 

  • Robson B, Pain RH (1976) The mechanism of folding of globular proteins. Equilibria and kinetics of conformational transitions of penicillinase from Staphylococcus aureus involving a state of intermediate conformation. Biochem J 155:331–344

    Google Scholar 

  • Roder H, Elöve GA, Englander SW (1988) Structural characterisation of folding intermediates in cytochrome c by H-exchange labelling and protein NMR. Nature 335:700–704

    Google Scholar 

  • Semisotnov GV, Rodionova NA, Kutyshenko VP, Ebert B, Blanck J, Ptitsyn OB (1987) Sequential mechanism of refolding of carbonic anhydrase B. FEBS Lett 224:9–13

    Google Scholar 

  • Teschner W, Rudolph R, Garel JR (1987) Intermediates on the folding pathway of octopine dehydrogenase from Pecten jacobaeus. Biochemistry 26:2791–2796

    Google Scholar 

  • Thomas RM, Feeney J, Nicholson RB, Pain RH, Roberts GCK (1983) Identification by NMR spectroscopy of a stable intermediate in the unfolding of staphylococcal β-lactamase. Biochem J 215:525–529

    Google Scholar 

  • Udgaonkar JB, Baldwin RL (1988) NMR evidence for an early framework intermediate on the folding pathway of ribonuclease A. Nature 335:694–699

    Google Scholar 

  • Zerovnik E, Pain RH (1986) Refolding of β-lactamase followed by FPLC. Protein Eng 1:248

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Offprint requests to: R. H. Pain

Rights and permissions

Reprints and permissions

About this article

Cite this article

Christensen, H., Pain, R.H. Molten globule intermediates and protein folding. Eur Biophys J 19, 221–229 (1991). https://doi.org/10.1007/BF00183530

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00183530

Key words

Navigation