Skip to main content

Environmentally Responsive Dna Bending by the Agrobacterium Tumefaciens Transcriptional Activator OccR

  • Chapter
Advances in Molecular Genetics of Plant-Microbe Interactions

Part of the book series: Current Plant Science and Biotechnology in Agriculture ((PSBA,volume 21))

  • 189 Accesses

Abstract

Octopine-type Ti plasmids encode a LysR-type protein called OccR that regulates a 14 kb operon containing genes that direct the uptake and catabolism of octopine as well as a second uptake system and the traR gene, which regulates transcription of the Ti plasmid tra regulon. OccR binds to its operator in the presence or absence of octopine, but octopine shortens the DNase I-protected region and decreases the angle of a DNA bend incited by the protein. Experiments adjusting the phase between this bend and a sequence directed bend show that bend direction is not influenced by octopine, and that DNA is bent toward the protein. Operator resection experiments demonstrate that the right half of the operator is essential and sufficient for protein binding, while the left half contains several sites required for ligand-responsive DNA bending. A constitutive OccR protein was unable to cause as high a bend angle in the absence of octopine as the wild type protein.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 169.00
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 219.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 219.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. Tempé J, Guyon P, Tepfer D, Petit A. The role of opines in the ecology of the Tiplasmids ofAgrobacterium.In: Timmis KN, Pulher A, editors. Plasmids of medical, environmental, and commercial importance. Amsterdam: Elsevier/North Holland Biomedical Press, 1979: 353–363.

    Google Scholar 

  2. Dessaux Y, Petit A, Tempé J. Opines in Agrobacterium biology. In: Verma DPS editor. Molecular signals in plant-microbe communications. Ann Arbor: CRC Press, 1992: 109–136.

    Google Scholar 

  3. Klapwijk PM, Scheulderman T, Schilperoort R. Coordinated regulation of octopine degradation and conjugative transfer of Ti plasmids inAgrobacterium tumefaciens:evidence for a common regulatory gene and separate operons. J Bacteriol 1978;136:77–585.

    Google Scholar 

  4. Schell MA. Molecular biology of the LysR family of transcriptional regulators. Annu. Rev. Microbiol. 1993;47:597–626.

    Article  CAS  Google Scholar 

  5. Fuqua WC, Winans SC. A LuxR-LuxI type regulatory system activatesAgrobacteriumTi plasmid conjugal transfer in the presence of a plant tumor metabolite. J Bacteriol 1994;176:2796–2806.

    PubMed  CAS  Google Scholar 

  6. Fuqua WC, Winans SC, Greenberg EP. Quorum sensing in bacteria: the LuxR/LuxI family of cell density responsive transcriptional regulators. J Bacteriol 1994;176:269–275.

    PubMed  CAS  Google Scholar 

  7. Wang L, Heimann JD, Winans SC. TheA. tumefacienstranscriptional activator OccR causes a bend at a target promoter, which is partially relaxed by a plant tumor metabolite. Cell 1992;69:659–667.

    Article  PubMed  CAS  Google Scholar 

  8. Nielsen PE. Chemical and photochemical probing of DNA complexes. J Mol Recog 1990;3:1–25.

    Article  CAS  Google Scholar 

  9. Fisher RF, Long SR. Interactions of NodD at thenodbox: NodD binds to two distinct sites on the same face of the helix and induces a bend in the DNA. J Mol Biol. 1993;233:336–348.

    Article  PubMed  CAS  Google Scholar 

  10. Kim J, Zwieb C, Wu C, Adhya S. Bending of DNA by gene regulatory proteins: construction and use of a DNA bending vector. Gene 1989;85:15–23.

    Article  PubMed  CAS  Google Scholar 

  11. Hryniewicz MM, Kredich NM. Stoichiometry of binding of CysB to thecysJHI cysKandcysPpromoter regions ofSalmonella typhimurium.J Bacteriol 1994;176:3673–3682.

    PubMed  CAS  Google Scholar 

  12. Cho K, Winans SC. Altered Function Mutations in theAgrobacterium tumefaciensOccR Protein and in an OccR-Regulated Promoter. J Bacteriol 1993; 175:7715–7719.

    PubMed  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 1994 Springer Science+Business Media Dordrecht

About this chapter

Cite this chapter

Winans, S.C., Wang, L., Fuqua, C., Cho, K. (1994). Environmentally Responsive Dna Bending by the Agrobacterium Tumefaciens Transcriptional Activator OccR. In: Daniels, M.J., Downie, J.A., Osbourn, A.E. (eds) Advances in Molecular Genetics of Plant-Microbe Interactions. Current Plant Science and Biotechnology in Agriculture, vol 21. Springer, Dordrecht. https://doi.org/10.1007/978-94-011-0177-6_3

Download citation

  • DOI: https://doi.org/10.1007/978-94-011-0177-6_3

  • Publisher Name: Springer, Dordrecht

  • Print ISBN: 978-94-010-4079-2

  • Online ISBN: 978-94-011-0177-6

  • eBook Packages: Springer Book Archive

Publish with us

Policies and ethics