Abstract
The concept of soil quality is very difficult to satisfactorily define. Possibly a definition based upon the suitability of a soil to perform the purpose for which it is required, i.e. function, while having limitations, is suitable in most circumstances. Certainly, some of the most important determinants of soil quality include the ability of a soil to decompose plant and animal residues, maintain adequate nutrient and soil organic matter pools and to act as a filtering system to supply pure water to our rivers, lakes and ground waters. The activities of the soil micro-organisms (i.e. the fungi, bacteria, protozoa, yeasts etc.) drive these processes. Any factors which inhibit their activities therefore have large effects on soil fertility, and therefore soil quality. Linking the activities of one, or at best a few, species of soil micro-organism to soil quality is normally an impractical proposition. Another problem is that soil microbial activity, resulting for example, in carbon dioxide evolution from soil, is the net result of complex substrate-microbial interactions, again involving many different microbial populations. To overcome this, we have developed a number of methods to measure the soil micro-organisms as a single, undifferentiated, unit, or ‘black box’ – termed the microbial biomass. Other methods can indicate the activity of this biomass. While having obvious limitations, this approach has enabled us to detect the direction of change (i.e. decrease or increases) in soil organic matter and in soil ecosystem functioning due, for example to increases in heavy metal concentrations, changes in pH or to inputs of crop residues. The value of the microbial biomass as an indicator, or ‘early warning’ of changing soil conditions, or changing soil quality, will be illustrated and discussed.
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Aciego Pietri JC, Brookes PC (2008) Relationships between soil pH and microbial properties in a UK arable soil. Soil Biol Biochem 40:1856–1861
Amato M, Ladd JN (1988) Assay for microbial biomass based on ninhydrin-reactive nitrogen in extracts of fumigated soils. Soil Biol Biochem 20:107–114
Avery BW, Catt JA (1995) The soil at Rothamsted. Lawes Agricultural Trust (IACR-Rothamsted), Harpenden, 44 pp
Blake L, Goulding KWT, Mott CJB, Johnston AE (1999) Changes in soil chemistry accompanying acidification over more than 100 years under woodland and grass at Rothamsted experimental station. Eur J Soil Sci 50:401–412
Bloem J, Schouten AJ, Soren J, Sorensen MR, Van der Werf A, Bruere M (2005) Monitoring and evaluating soil quality. In: Bloem J, Hopkins DW, Benedetti A (eds) Microbiological methods for evaluating soil quality. CABI Publishing, Wallingford, pp 23–49
Brookes PC (1995) The use of microbial parameters in monitoring soil pollution by heavy metals. Biol Fertil Soils 19:269–279
Brookes PC, Mcgrath SP (1984) The effects of metal toxicity on the soil microbial biomass. J Soil Sci 35:341–346
Chander K, Brookes PC (1991a) Microbial biomass dynamics during the decomposition of glucose and maize in metal-contaminated and non-contaminated soils. Soil Biol Biochem 23:917–925
Chander K, Brookes PC (1991b) Effects of heavy metals from past applications of sewage sludge on microbial biomass and organic matter accumulation in a sandy loam and silty loam UK soil. Soil Biol Biochem 23:927–932
Chander K, Brookes PC (1991c) Plant inputs of carbon to metal-contaminated and non-contaminated soil and effects on the synthesis of soil microbial biomass. Soil Biol Biochem 23:1169–1177
Chander K, Brookes PC (1992) Synthesis of microbial biomass from added glucose in metal-contaminated and non-contaminated soils following repeated fumigation. Soil Biol Biochem 24:613–614
Chander K, Brookes PC (1993) Residual effects of zinc, copper and nickel in sewage sludge on microbial biomass in a sandy loam. Soil Biol Biochem 25:1231–1239
Cook KA, Greaves MP (1983) Natural variability in microbial activities. In: Somerville L, Greaves MP (eds) Pesticide effects on soil microflora. Taylor and Francis, London, pp 15–43
Domsch KH (1980) Interpretation and evaluation of data. In: Recommended tests for assessing the side effects of pesticides on the soil microflora. Technical report no. 59, Weed Research Organisation, Oxford, pp 6–8
Domsch KH, Jagnow G, Anderson TH (1983) An ecological concept for the assessment of side effects of agrochemicals on soil micro-organisms. Residue Rev 86:185–235
Doran JW, Parkin TB (1994) Defining and assessing soil quality. In: Doran JW, Coleman DC, Bezdicek DF, Stewart BA (eds) Defining soil quality for a special environment, Special Publication 35. American Society of Agronomy, Madison, pp 3–21
Giller KE, Witter E, McGrath SP (1998) Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review. Soil Biol Biochem 30:1389–1414
Jenkinson DS (1988) The determination of microbial biomass carbon and nitrogen in soil. In: Wilson JR (ed) Advances in nitrogen cycling in agricultural ecosystems. CAB International, Wallingford, pp 368–386
Joergensen RG, Brookes PC (1990) Ninhydrin-reactive nitrogen measurements of microbial biomass in 0.5 M K2SO4 soil extracts. Soil Biol Biochem 22:1023–1027
Rodale Institute (1991) Conference report and abstract. International conference on the assessment and monitoring of soil quality. Pensylvania, USA
Tinsley J, Taylor TJ, Moore JH (1951) The determination of carbon dioxide derived from carbonates in agricultural and biological materials. Analyst 76:300–310
Van-Camp L, Bujarrabal B, Gentle AR, Jones RJA, Montanarella L, Olazabal C, Selvaradjou Vance ED, Brookes PC, Jenkinson DS (1987) An extraction method for measuring microbial biomass C. Soil Biol Biochem 19:703–707
Vance ED, Brookes PC, Jenkinson DS (1987) An extraction method for measuring microbial biomass C. Soil Biol Biochem 19:703–707
Williams DE (1948) A rapid manometric method for the determination of carbonate in soils. Proc Soil Sci Soc Am 13:127–129
Wu J, Joergensen RG, Pommerening B, Chaussod R, Brookes PC (1990) Measurement of soil microbial biomass C by fumigation-extraction – an automated procedure. Soil Biol Biochem 22:1167–1169
Acknowledgements
Rothamsted Research is an Institute of the UK Biotechnological and Biological Sciences Research Council. We thank P. R. Poulton for helpful discussion. We also thank the Council of Scientific and Humanistic Development (CDCH) of the Central University of Venezuela for financial support.
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Brookes, P.C., Pietri, J.C.A., Wu, Y., Xu, J. (2013). Microbial Indicators of Soil Quality in Upland Soils. In: Xu, J., Sparks, D. (eds) Molecular Environmental Soil Science. Progress in Soil Science. Springer, Dordrecht. https://doi.org/10.1007/978-94-007-4177-5_14
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