Abstract
This article describes fundamental devices and control techniques that have materialized high-speed atomic force microscopy (AFM) capable of recording dynamic processes of individual biomolecules on video at an imaging rate of 10-25 frames/s, without disturbing their biological functions.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
References
Viani, M.B., Richter, M., Rief, M., Gaub, H.E., Plaxco, K.W., Cleland, A.N., Hansma, H.G., Hansma, P.K.: Fast imaging and fast force spectroscopy of single biopolymers with a new atomic force microscope designed for small cantilevers. Rev. Sci. Instrum. 70, 4300–4303 (1999)
Fantner, G.E., Schitter, G., Kindt, J.H., Ivanov, T., Ivanova, K., Patel, R., Holten-Andrersen, N., Adams, J., Thurnera, P.J., Rangelowb, I.W., Hansma, P.K.: Components for high-speed atomic force microscopy. Ultramicroscopy 106, 881–887 (2006)
Ando, T., Kodera, N., Takai, E., Maruyama, D., Saito, K., Toda, A.: High-speed atomic force microscope for studying biological macromolecules. Proc. Natl. Acad. Sci. USA 98, 12468–12472 (2001)
Ando, T., Uchihashi, T., Fukuma, T.: High-speed atomic force microscopy for nano-visualization of dynamic biomolecular processes. Prog. Surf. Sci. 83, 337–437 (2008)
Ando, T., Uchihashi, T., Kodera, N., Yamamoto, D., Taniguchi, M., Miyagi, A., Yamashita, H.: Review: High-speed atomic force microscopy for observing dynamic biomolecular processes. J. Mol. Recognit. 20, 448–458 (2007)
Ando, T., Uchihashi, T., Kodera, N., Yamamoto, D., Taniguchi, M., Miyagi, A., Yamashita, H.: Invited Review: High-speed AFM and nano-visualization of biomolecular processes. Pflügers Archiv - Eur. J. Physiol. 456, 211–225 (2008)
Hansma, P.K., Schitter, G., Fantner, G.F., Prater, C.: High-speed atomic force microscopy. Science 314, 601–602 (2006)
Walters, D.A., Cleveland, J.P., Thomson, N.H., Hansma, P.K., Wendman, M.A., Gurley, G., Elings, V.: Short cantilevers for atomic force microscopy. Rev. Sci. Instrum. 67, 3583–3590 (1996)
Kitazawa, M., Shiotani, K., Toda, A.: Batch fabrication of sharpened silicon nitride tips. Jpn. J. Appl. Phys. 42, 4844–4847 (2003)
Ando, T., Uchihashi, T., Kodera, N., Miyagi, A., Nakakita, R., Yamashita, H., Matada, K.: High-speed AFM for studying the dynamic behavior of proteins molecules at work. Surf. Sci. Nanotechnol. 3, 384–392 (2005)
Fukuma, T., Okazaki, Y., Kodera, N., Uchihashi, T., Ando, T.: High resonance frequency force microscope scanner using inertia balance support. Appl. Phys. Lett. 92, 243119 (2008)
Kodera, N., Yamashita, H., Ando, T.: Active damping of the scanner for high-speed atomic force microscopy. Rev. Sci. Instrum. 76, 053708 (2005)
Kodera, N., Sakashita, M., Ando, T.: Dynamic proportional-integral-differential controller for high-speed atomic force microscopy. Rev. Sci. Instrum. 77, 083704 (2006)
Schiener, J., Witt, S., Stark, M., Guckenberger, R.: Stabilized atomic force microscopy imaging in liquids using second harmonic of cantilever motion for set-point control. Rev. Sci. Instrum. 75, 2564–2568 (2004)
Henderson, R., Baldwin, J.M., Ceska, T.A., Zemlin, F., Beckmann, E., Downing, K.H.: Model for the structure of bacteriorhodopsin based on high-resolution electron cryomicroscopy. J. Mol. Biol. 213, 899–929 (1990)
Yamashita, H., Voïtchovsky, K., Uchihashi, T., Contera, S.A., Ryan, J.F., Ando, T.: Dynamics of bacteriorhodopsin 2D crystal observed by high-speed atomic force microscopy. J. Struc. Biol. 167, 153–158 (2009)
Jackson, M.B., Sturtevant, J.M.: Phase transitions of the purple membranes of Halobac-terium halobium. Biochemistry 17, 911–915 (1978)
Koltover, I., Raedler, J.O., Salditt, T., Rothschild, K.J., Safinya, C.R.: Phase behavior and interactions of the membrane-protein bacteriorhodopsin. Phys. Rev. Lett. 82, 3184–3187 (1999)
Kimura, Y., Vassylyev, D.G., Miyazawa, A., Kidera, A., Matsushima, M., Mitsuoka, K., Murata, K., Hirai, T., Fujiyoshi, Y.: Surface of bacteriorhodopsin revealed by high-resolution electron crystallography. Nature 389, 206–211 (1997)
Luecke, H., Schobert, B., Richter, H.T., Cartailler, J.P., Lanyi, J.K.: Structure of bacteriorhodopsin at 1.55 Å resolution. J. Mol. Biol. 291, 899–911 (1999)
Lanyi, J.K.: Bacteriorhodopsin. Annu. Rev. Physiol. 66, 665–688 (2004)
Dencher, N.A., Dresselhaus, D., Zaccai, G., Büldt, G.: Structural changes in bacteri-orhodopsin during proton translocation revealed by neutron diffraction. Proc. Natl. Acad. Sci. USA 86, 7876–7879 (1989)
Subramaniam, S., Gerstein, M., Oesterhelt, D., Henderson, R.: Electron diffraction analysis of structural changes in the photocycle of bacteriorhodopsin. EMBO J. 12, 1–8 (1993)
Brown, L.S., Needleman, R., Lanyi, J.K.: Conformational change of the E-F interhelical loop in the M photointermediate of bacteriorhodopsin. J. Mol. Biol. 317, 471–478 (2002)
Sass, H.J., Büld, G., Gessenich, R., Hehn, D., Neff, D., Schlesinger, R., Berendzen, J., Ormos, P.: Structural alterations for proton translocation in the M state of wild-type bacteriorhodopsin. Nature 406, 649–653 (2000)
Subramaniam, S., Henderson, R.: Molecular mechanism of vectorial proton translocation by bacteriorhodopsin. Nature 406, 653–657 (2000)
Shibata, M., Yamashita, H., Uchihashi, T., Kandori, H., Ando, T.: High-speed atomic force microscopy shows dynamic molecular processes in photo-activated bacteriorhodopsin. Nature Nanotech. 5, 208–212 (2010)
Yamamoto, D., Nagura, N., Omote, S., Taniguchi, M., Ando, T.: Streptavidin 2D crystal substrates for visualizing biomolecular processes by atomic force microscopy. Biophys. J. 97, 2358–2367 (2009)
Yamamoto, D., Uchihashi, T., Kodera, N., Ando, T.: Anisotropic diffusion of point defects in two-dimensional crystal of streptavidin observed by high-speed atomic force microscopy. Nanotechnology 19, 0384009 (2008)
Miyagi, A., Tsunaka, Y., Uchihashi, T., Miyanagi, K., Hirose, S., Morikawa, K., Ando, T.: Visualization of intrinsically disordered regions of proteins by high-speed atomic force microscopy. Chem. Phys. Chem. 9, 1859–1866 (2008)
Author information
Authors and Affiliations
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2011 Springer-Verlag Berlin Heidelberg
About this chapter
Cite this chapter
Ando, T. (2011). Techniques Developed for High-Speed AFM. In: Eleftheriou, E., Moheimani, S.O.R. (eds) Control Technologies for Emerging Micro and Nanoscale Systems. Lecture Notes in Control and Information Sciences, vol 413. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-22173-6_1
Download citation
DOI: https://doi.org/10.1007/978-3-642-22173-6_1
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-642-22172-9
Online ISBN: 978-3-642-22173-6
eBook Packages: EngineeringEngineering (R0)